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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Bifidobacterium scardovii (GCA_001042635.1)

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PROKKA Annotations for GCA_001042635.1
Genome Selected: Bifidobacterium scardovii
ContigsBases CDSrRNA tmRNAtRNA
1 3158347 2528 6 1 58
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Annotation Table [page:6]    |    Number of Records Found: 2606 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 AP012331.1 GCA_001042635.1_02501 CDS open 3012807-3013703 897_na     298_aa araQ_18 L-arabinose transport system permease protein AraQ
2502 AP012331.1 GCA_001042635.1_02502 CDS open 3013700-3014656 957_na     318_aa melD_6 Melibioseraffinosestachyose import permease protein MelD
2503 AP012331.1 GCA_001042635.1_02503 CDS open 3014986-3015666 681_na     226_aa vldH Validoxylamine A 7-phosphate phosphatase
2504 AP012331.1 GCA_001042635.1_02504 CDS open 3015906-3016460 555_na     184_aa hypothetical protein
2505 AP012331.1 GCA_001042635.1_02505 CDS open 3016631-3017662 1032_na     343_aa cbpA Curved DNA-binding protein
2506 AP012331.1 GCA_001042635.1_02506 CDS open 3017747-3018430 684_na     227_aa grpE Protein GrpE
2507 AP012331.1 GCA_001042635.1_02507 CDS open 3018433-3020316 1884_na     627_aa dnaK Chaperone protein DnaK
2508 AP012331.1 GCA_001042635.1_02508 CDS open 3020669-3022768 2100_na     699_aa hypothetical protein
2509 AP012331.1 GCA_001042635.1_02509 CDS open 3023443-3024453 1011_na     336_aa cytR_10 HTH-type transcriptional repressor CytR
2510 AP012331.1 GCA_001042635.1_02510 CDS open 3024960-3026333 1374_na     457_aa hypothetical protein
2511 AP012331.1 GCA_001042635.1_02511 CDS open 3026374-3026634 261_na     86_aa hypothetical protein
2512 AP012331.1 GCA_001042635.1_02512 CDS open 3027038-3027754 717_na     238_aa degA_5 HTH-type transcriptional regulator DegA
2513 AP012331.1 GCA_001042635.1_02513 CDS open 3027709-3028062 354_na     117_aa cytR_11 HTH-type transcriptional repressor CytR
2514 AP012331.1 GCA_001042635.1_02514 CDS open 3028172-3029530 1359_na     452_aa hypothetical protein
2515 AP012331.1 GCA_001042635.1_02515 CDS open 3029823-3030839 1017_na     338_aa degA_6 HTH-type transcriptional regulator DegA
2516 AP012331.1 GCA_001042635.1_02516 CDS open 3030994-3032361 1368_na     455_aa hypothetical protein
2517 AP012331.1 GCA_001042635.1_02517 CDS open 3032777-3033802 1026_na     341_aa ccpA_17 Catabolite control protein A
2518 AP012331.1 GCA_001042635.1_02518 CDS open 3033848-3035578 1731_na     576_aa glgB_2 1%2C4-alpha-glucan branching enzyme GlgB
2519 AP012331.1 GCA_001042635.1_02519 CDS open 3035844-3037103 1260_na     419_aa cycB Cyclodextrin-binding protein
2520 AP012331.1 GCA_001042635.1_02520 CDS open 3037131-3038531 1401_na     466_aa hypothetical protein
2521 AP012331.1 GCA_001042635.1_02521 CDS open 3038528-3039448 921_na     306_aa hypothetical protein
2522 AP012331.1 GCA_001042635.1_02522 CDS open 3039568-3041598 2031_na     676_aa pulA Pullulanase
2523 AP012331.1 GCA_001042635.1_02523 CDS open 3041667-3042410 744_na     247_aa hypothetical protein
2524 AP012331.1 GCA_001042635.1_02524 CDS open 3042675-3044912 2238_na     745_aa malQ_2 4-alpha-glucanotransferase
2525 AP012331.1 GCA_001042635.1_02525 CDS open 3045129-3046142 1014_na     337_aa ccpA_18 Catabolite control protein A
2526 AP012331.1 GCA_001042635.1_02526 CDS open 3046241-3048733 2493_na     830_aa hypothetical protein
2527 AP012331.1 GCA_001042635.1_02527 CDS open 3048910-3050223 1314_na     437_aa hypothetical protein
2528 AP012331.1 GCA_001042635.1_02528 CDS open 3050409-3051806 1398_na     465_aa levB Levanbiose-producing levanase
2529 AP012331.1 GCA_001042635.1_02529 CDS open 3052090-3053172 1083_na     360_aa degA_7 HTH-type transcriptional regulator DegA
2530 AP012331.1 GCA_001042635.1_02530 CDS open 3053179-3053892 714_na     237_aa hypothetical protein
2531 AP012331.1 GCA_001042635.1_02531 CDS open 3054237-3055601 1365_na     454_aa hypothetical protein
2532 AP012331.1 GCA_001042635.1_02532 CDS open 3055844-3057598 1755_na     584_aa malL_1 Oligo-1%2C6-glucosidase
2533 AP012331.1 GCA_001042635.1_02533 CDS open 3057930-3058766 837_na     278_aa melC_6 Melibioseraffinosestachyose import permease protein MelC
2534 AP012331.1 GCA_001042635.1_02534 CDS open 3058763-3059617 855_na     284_aa melD_7 Melibioseraffinosestachyose import permease protein MelD
2535 AP012331.1 GCA_001042635.1_02535 CDS open 3059946-3060968 1023_na     340_aa exuR putative HTH-type transcriptional repressor ExuR
2536 AP012331.1 GCA_001042635.1_02536 CDS open 3061109-3062443 1335_na     444_aa hypothetical protein
2537 AP012331.1 GCA_001042635.1_02537 CDS open 3062784-3063884 1101_na     366_aa hypothetical protein
2538 AP012331.1 GCA_001042635.1_02538 CDS open 3064032-3065378 1347_na     448_aa hypothetical protein
2539 AP012331.1 GCA_001042635.1_02539 CDS open 3065627-3068122 2496_na     831_aa Extracellular exo-alpha-L-arabinofuranosidase
2540 AP012331.1 GCA_001042635.1_02540 CDS open 3068218-3070059 1842_na     613_aa ycdG putative oligo-1%2C6-glucosidase 2
2541 AP012331.1 GCA_001042635.1_02541 CDS open 3070210-3071580 1371_na     456_aa hypothetical protein
2542 AP012331.1 GCA_001042635.1_02542 CDS open 3071740-3072753 1014_na     337_aa hypothetical protein
2543 AP012331.1 GCA_001042635.1_02543 CDS open 3073119-3074150 1032_na     343_aa degA_8 HTH-type transcriptional regulator DegA
2544 AP012331.1 GCA_001042635.1_02544 CDS open 3074253-3074942 690_na     229_aa gpm2 Acid phosphatase
2545 AP012331.1 GCA_001042635.1_02545 CDS open 3075073-3075357 285_na     94_aa hypothetical protein
2546 AP012331.1 GCA_001042635.1_02546 CDS open 3075381-3076193 813_na     270_aa nfrA1 FMN reductase (NADPH)
2547 AP012331.1 GCA_001042635.1_02547 CDS open 3076475-3076726 252_na     83_aa hypothetical protein
2548 AP012331.1 rRNA open 3077140-3080192 23S ribosomal RNA
2549 AP012331.1 rRNA open 3080657-3082178 16S ribosomal RNA
2550 AP012331.1 GCA_001042635.1_02550 CDS open 3082798-3083559 762_na     253_aa cobB NAD-dependent protein deacetylase
2551 AP012331.1 GCA_001042635.1_02551 CDS open 3083670-3084935 1266_na     421_aa tdcB L-threonine ammonia-lyase
2552 AP012331.1 GCA_001042635.1_02552 CDS open 3085097-3086917 1821_na     606_aa malL_2 Oligo-1%2C6-glucosidase
2553 AP012331.1 GCA_001042635.1_02553 CDS open 3087099-3088034 936_na     311_aa ngcG Diacetylchitobiose uptake system permease protein NgcG
2554 AP012331.1 GCA_001042635.1_02554 CDS open 3088040-3088984 945_na     314_aa melD_8 Melibioseraffinosestachyose import permease protein MelD
2555 AP012331.1 GCA_001042635.1_02555 CDS open 3089001-3090293 1293_na     430_aa hypothetical protein
2556 AP012331.1 GCA_001042635.1_02556 CDS open 3090541-3091698 1158_na     385_aa nagC_6 N-acetylglucosamine repressor
2557 AP012331.1 GCA_001042635.1_02557 CDS open 3091927-3094161 2235_na     744_aa rafA_3 Alpha-galactosidase
2558 AP012331.1 GCA_001042635.1_02558 CDS open 3094309-3094740 432_na     143_aa tadA tRNA-specific adenosine deaminase
2559 AP012331.1 GCA_001042635.1_02559 CDS open 3094903-3096978 2076_na     691_aa hypothetical protein
2560 AP012331.1 GCA_001042635.1_02560 CDS open 3096987-3097610 624_na     207_aa hypothetical protein
2561 AP012331.1 GCA_001042635.1_02561 CDS open 3097628-3098680 1053_na     350_aa hypothetical protein
2562 AP012331.1 GCA_001042635.1_02562 CDS open 3098859-3099599 741_na     246_aa hypothetical protein
2563 AP012331.1 GCA_001042635.1_02563 CDS open 3100216-3100797 582_na     193_aa dcd dCTP deaminase%2C dUMP-forming
2564 AP012331.1 GCA_001042635.1_02564 CDS open 3100893-3103874 2982_na     993_aa pacL_2 Calcium-transporting ATPase
2565 AP012331.1 GCA_001042635.1_02565 CDS open 3104314-3105045 732_na     243_aa hypothetical protein
2566 AP012331.1 GCA_001042635.1_02566 CDS open 3105051-3106004 954_na     317_aa hypothetical protein
2567 AP012331.1 GCA_001042635.1_02567 CDS open 3106151-3106396 246_na     81_aa mazE Antitoxin MazE
2568 AP012331.1 GCA_001042635.1_02568 CDS open 3106396-3106719 324_na     107_aa pemK Endoribonuclease PemK
2569 AP012331.1 GCA_001042635.1_02569 CDS open 3106790-3108052 1263_na     420_aa mdrP Na(+)%2C Li(+)%2C K(+)H(+) antiporter
2570 AP012331.1 GCA_001042635.1_02570 CDS open 3108159-3109154 996_na     331_aa putative tRNArRNA methyltransferase
2571 AP012331.1 GCA_001042635.1_02571 CDS open 3109375-3110784 1410_na     469_aa hypothetical protein
2572 AP012331.1 GCA_001042635.1_02572 CDS open 3110978-3112105 1128_na     375_aa msiK Diacetylchitobiose uptake system ATP-binding protein MsiK
2573 AP012331.1 misc_RNA open 3112108-3112166 msiK
2574 AP012331.1 GCA_001042635.1_02574 CDS open 3112405-3113166 762_na     253_aa yurK putative HTH-type transcriptional regulator YurK
2575 AP012331.1 GCA_001042635.1_02575 CDS open 3113372-3114754 1383_na     460_aa ulaA Ascorbate-specific PTS system EIIC component
2576 AP012331.1 GCA_001042635.1_02576 CDS open 3114795-3115091 297_na     98_aa hypothetical protein
2577 AP012331.1 GCA_001042635.1_02577 CDS open 3115225-3115665 441_na     146_aa cmtB Mannitol-specific cryptic phosphotransferase enzyme IIA component
2578 AP012331.1 GCA_001042635.1_02578 CDS open 3115962-3116747 786_na     261_aa hypothetical protein
2579 AP012331.1 GCA_001042635.1_02579 CDS open 3116744-3118084 1341_na     446_aa hypothetical protein
2580 AP012331.1 GCA_001042635.1_02580 CDS open 3118421-3118993 573_na     190_aa hypothetical protein
2581 AP012331.1 GCA_001042635.1_02581 CDS open 3118986-3121439 2454_na     817_aa bglB_2 Thermostable beta-glucosidase B
2582 AP012331.1 GCA_001042635.1_02582 CDS open 3121814-3122464 651_na     216_aa hypothetical protein
2583 AP012331.1 GCA_001042635.1_02583 CDS open 3122445-3123128 684_na     227_aa hypothetical protein
2584 AP012331.1 GCA_001042635.1_02584 CDS open 3123290-3124135 846_na     281_aa hypothetical protein
2585 AP012331.1 GCA_001042635.1_02585 CDS open 3124487-3127612 3126_na     1041_aa hypothetical protein
2586 AP012331.1 GCA_001042635.1_02586 CDS open 3127796-3129100 1305_na     434_aa hypothetical protein
2587 AP012331.1 GCA_001042635.1_02587 CDS open 3129111-3129812 702_na     233_aa hypothetical protein
2588 AP012331.1 GCA_001042635.1_02588 CDS open 3130061-3132925 2865_na     954_aa hypothetical protein
2589 AP012331.1 GCA_001042635.1_02589 CDS open 3133328-3135523 2196_na     731_aa pknD_6 Serinethreonine-protein kinase PknD
2590 AP012331.1 GCA_001042635.1_02590 CDS open 3135784-3136761 978_na     325_aa hypothetical protein
2591 AP012331.1 tRNA open 3137037-3137111 tRNA-Thr(tgt)
2592 AP012331.1 GCA_001042635.1_02592 CDS open 3137496-3139046 1551_na     516_aa hypothetical protein
2593 AP012331.1 GCA_001042635.1_02593 CDS open 3139106-3140071 966_na     321_aa ksgA Ribosomal RNA small subunit methyltransferase A
2594 AP012331.1 GCA_001042635.1_02594 CDS open 3140068-3141045 978_na     325_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2595 AP012331.1 GCA_001042635.1_02595 CDS open 3141077-3141727 651_na     216_aa hypothetical protein
2596 AP012331.1 GCA_001042635.1_02596 CDS open 3141787-3143115 1329_na     442_aa A-adding tRNA nucleotidyltransferase
2597 AP012331.1 GCA_001042635.1_02597 CDS open 3143289-3143990 702_na     233_aa rppH RNA pyrophosphohydrolase
2598 AP012331.1 GCA_001042635.1_02598 CDS open 3144047-3146326 2280_na     759_aa hypothetical protein
2599 AP012331.1 GCA_001042635.1_02599 CDS open 3146323-3150294 3972_na     1323_aa murJ lipid II flippase MurJ
2600 AP012331.1 GCA_001042635.1_02600 CDS open 3150744-3151676 933_na     310_aa trxB Thioredoxin reductase
2601 AP012331.1 GCA_001042635.1_02601 CDS open 3152202-3153566 1365_na     454_aa noc_2 Nucleoid occlusion protein
2602 AP012331.1 GCA_001042635.1_02602 CDS open 3153568-3154554 987_na     328_aa Iron-sulfur cluster carrier protein
2603 AP012331.1 GCA_001042635.1_02603 CDS open 3154784-3155545 762_na     253_aa rsmG Ribosomal RNA small subunit methyltransferase G
2604 AP012331.1 GCA_001042635.1_02604 CDS open 3155548-3156081 534_na     177_aa hypothetical protein
2605 AP012331.1 GCA_001042635.1_02605 CDS open 3156179-3157186 1008_na     335_aa yidC_2 Membrane protein insertase YidC
2606 AP012331.1 GCA_001042635.1_02606 CDS open 3157902-3158036 135_na     44_aa rpmH 50S ribosomal protein L34