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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Haemophilus parainfluenzae (GCA_001053535.1)

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PROKKA Annotations for GCA_001053535.1
Genome Selected: Haemophilus parainfluenzae
ContigsBases CDSrRNA tmRNAtRNA
117 2175985 2054 5 1 28
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Annotation Table [page:5]    |    Number of Records Found: 2119 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 JVSU01000117.1 rRNA open 6-1391 23S ribosomal RNA (partial)
2002 JVSU01000117.1 rRNA open 1539-1648 5S ribosomal RNA
2003 JVSU01000117.1 GCA_001053535.1_02003 CDS open 1776-2285 510_na     169_aa def Peptide deformylase
2004 JVSU01000117.1 GCA_001053535.1_02004 CDS open 2345-3301 957_na     318_aa fmt Methionyl-tRNA formyltransferase
2005 JVSU01000117.1 GCA_001053535.1_02005 CDS open 3301-4638 1338_na     445_aa rsmB Ribosomal RNA small subunit methyltransferase B
2006 JVSU01000117.1 GCA_001053535.1_02006 CDS open 4639-5454 816_na     271_aa hypothetical protein
2007 JVSU01000117.1 GCA_001053535.1_02007 CDS open 5451-6827 1377_na     458_aa trkA Trk system potassium uptake protein TrkA
2008 JVSU01000117.1 GCA_001053535.1_02008 CDS open 6906-7292 387_na     128_aa mscL Large-conductance mechanosensitive channel
2009 JVSU01000117.1 GCA_001053535.1_02009 CDS open 7353-7829 477_na     158_aa ispF 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase
2010 JVSU01000117.1 GCA_001053535.1_02010 CDS open 7826-8509 684_na     227_aa ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
2011 JVSU01000117.1 GCA_001053535.1_02011 CDS open 8509-8787 279_na     92_aa ftsB Cell division protein FtsB
2012 JVSU01000117.1 GCA_001053535.1_02012 CDS open 9039-9857 819_na     272_aa hel Lipoprotein E
2013 JVSU01000117.1 GCA_001053535.1_02013 CDS open 9925-10548 624_na     207_aa fabR HTH-type transcriptional repressor FabR
2014 JVSU01000117.1 GCA_001053535.1_02014 CDS open 10574-11479 906_na     301_aa oxyR Hydrogen peroxide-inducible genes activator
2015 JVSU01000117.1 GCA_001053535.1_02015 CDS open 11612-12337 726_na     241_aa PGdx Hybrid peroxiredoxin hyPrx5
2016 JVSU01000117.1 GCA_001053535.1_02016 CDS open 12441-12758 318_na     105_aa hypothetical protein
2017 JVSU01000117.1 GCA_001053535.1_02017 CDS open 12808-13434 627_na     208_aa glpG Rhomboid protease GlpG
2018 JVSU01000117.1 GCA_001053535.1_02018 CDS open 13456-14211 756_na     251_aa glpR Glycerol-3-phosphate regulon repressor
2019 JVSU01000117.1 GCA_001053535.1_02019 CDS open 14169-14306 138_na     45_aa hypothetical protein
2020 JVSU01000117.1 GCA_001053535.1_02020 CDS open 14636-15112 477_na     158_aa trmL tRNA (cytidine(34)-2-O)-methyltransferase
2021 JVSU01000117.1 GCA_001053535.1_02021 CDS open 15122-15706 585_na     194_aa rsmD Ribosomal RNA small subunit methyltransferase D
2022 JVSU01000117.1 GCA_001053535.1_02022 CDS open 15805-17262 1458_na     485_aa ftsY Signal recognition particle receptor FtsY
2023 JVSU01000117.1 GCA_001053535.1_02023 CDS open 17277-17933 657_na     218_aa ftsE Cell division ATP-binding protein FtsE
2024 JVSU01000117.1 GCA_001053535.1_02024 CDS open 17943-18875 933_na     310_aa ftsX Cell division protein FtsX
2025 JVSU01000001.1 GCA_001053535.1_02025 CDS open 280-696 417_na     138_aa hypothetical protein
2026 JVSU01000001.1 GCA_001053535.1_02026 CDS open 912-2423 1512_na     503_aa glpK Glycerol kinase
2027 JVSU01000001.1 GCA_001053535.1_02027 CDS open 2795-3538 744_na     247_aa glpF putative glycerol uptake facilitator protein
2028 JVSU01000001.1 GCA_001053535.1_02028 CDS open 3611-4381 771_na     256_aa tcyC L-cystine import ATP-binding protein TcyC
2029 JVSU01000001.1 GCA_001053535.1_02029 CDS open 4391-5107 717_na     238_aa tcyB L-cystine transport system permease protein TcyB
2030 JVSU01000001.1 GCA_001053535.1_02030 CDS open 5091-5864 774_na     257_aa putative amino-acid ABC transporter-binding protein
2031 JVSU01000001.1 GCA_001053535.1_02031 CDS open 6047-6997 951_na     316_aa cysK Cysteine synthase
2032 JVSU01000001.1 GCA_001053535.1_02032 CDS open 7098-7943 846_na     281_aa cysZ Sulfate transporter CysZ
2033 JVSU01000001.1 GCA_001053535.1_02033 CDS open 8114-9145 1032_na     343_aa zipA Cell division protein ZipA
2034 JVSU01000001.1 GCA_001053535.1_02034 CDS open 9228-11231 2004_na     667_aa ligA_2 DNA ligase
2035 JVSU01000001.1 GCA_001053535.1_02035 CDS open 11334-11897 564_na     187_aa hypothetical protein
2036 JVSU01000001.1 GCA_001053535.1_02036 CDS open 11955-12341 387_na     128_aa ygiW Protein YgiW
2037 JVSU01000001.1 GCA_001053535.1_02037 CDS open 12617-13837 1221_na     406_aa tyrP_3 Tyrosine-specific transport protein
2038 JVSU01000001.1 GCA_001053535.1_02038 CDS open 13874-14455 582_na     193_aa tdk Thymidine kinase
2039 JVSU01000001.1 GCA_001053535.1_02039 CDS open 14455-14691 237_na     78_aa hypothetical protein
2040 JVSU01000001.1 GCA_001053535.1_02040 CDS open 14701-15729 1029_na     342_aa tsaD tRNA N6-adenosine threonylcarbamoyltransferase
2041 JVSU01000001.1 GCA_001053535.1_02041 CDS open 15948-16163 216_na     71_aa rpsU 30S ribosomal protein S21
2042 JVSU01000001.1 GCA_001053535.1_02042 CDS open 16301-18085 1785_na     594_aa dnaG DNA primase
2043 JVSU01000001.1 GCA_001053535.1_02043 CDS open 18155-20044 1890_na     629_aa rpoD RNA polymerase sigma factor RpoD
2044 JVSU01000001.1 GCA_001053535.1_02044 CDS open 20177-20593 417_na     138_aa psiE Protein PsiE
2045 JVSU01000001.1 GCA_001053535.1_02045 CDS open 20629-21474 846_na     281_aa rlmJ Ribosomal RNA large subunit methyltransferase J
2046 JVSU01000001.1 misc_RNA open 21896-21987 TPP
2047 JVSU01000001.1 GCA_001053535.1_02047 CDS open 22062-22787 726_na     241_aa ssuB_2 Aliphatic sulfonates import ATP-binding protein SsuB
2048 JVSU01000001.1 GCA_001053535.1_02048 CDS open 22784-23521 738_na     245_aa ribX Riboflavin transport system permease protein RibX
2049 JVSU01000001.1 GCA_001053535.1_02049 CDS open 23547-24491 945_na     314_aa Putative thiamine biosynthesis protein
2050 JVSU01000001.1 GCA_001053535.1_02050 CDS open 24501-25148 648_na     215_aa tenA Aminopyrimidine aminohydrolase
2051 JVSU01000001.1 GCA_001053535.1_02051 CDS open 25164-25958 795_na     264_aa thiM Hydroxyethylthiazole kinase
2052 JVSU01000001.1 GCA_001053535.1_02052 CDS open 25951-26760 810_na     269_aa thiD Hydroxymethylpyrimidinephosphomethylpyrimidine kinase
2053 JVSU01000001.1 GCA_001053535.1_02053 CDS open 26771-27448 678_na     225_aa thiE Thiamine-phosphate synthase
2054 JVSU01000001.1 GCA_001053535.1_02054 CDS open 27436-28749 1314_na     437_aa yhjE_2 Inner membrane metabolite transport protein YhjE
2055 JVSU01000001.1 GCA_001053535.1_02055 CDS open 28874-31486 2613_na     870_aa mrcA Penicillin-binding protein 1A
2056 JVSU01000001.1 GCA_001053535.1_02056 CDS open 31586-32434 849_na     282_aa hypothetical protein
2057 JVSU01000001.1 GCA_001053535.1_02057 CDS open 32421-32933 513_na     170_aa hypothetical protein
2058 JVSU01000001.1 GCA_001053535.1_02058 CDS open 32930-33472 543_na     180_aa hypothetical protein
2059 JVSU01000001.1 GCA_001053535.1_02059 CDS open 33472-33855 384_na     127_aa hypothetical protein
2060 JVSU01000001.1 GCA_001053535.1_02060 CDS open 33857-35239 1383_na     460_aa pilQ Type IV pilus biogenesis and competence protein PilQ
2061 JVSU01000001.1 GCA_001053535.1_02061 CDS open 35423-35947 525_na     174_aa hypothetical protein
2062 JVSU01000001.1 GCA_001053535.1_02062 CDS open 36063-36647 585_na     194_aa nfuA FeS biogenesis protein NfuA
2063 JVSU01000001.1 GCA_001053535.1_02063 CDS open 36691-38220 1530_na     509_aa comM Competence protein ComM
2064 JVSU01000001.1 GCA_001053535.1_02064 CDS open 38350-38964 615_na     204_aa engB putative GTP-binding protein EngB
2065 JVSU01000001.1 GCA_001053535.1_02065 CDS open 39077-39946 870_na     289_aa putative protein
2066 JVSU01000001.1 GCA_001053535.1_02066 CDS open 39986-40984 999_na     332_aa oppF_3 Oligopeptide transport ATP-binding protein OppF
2067 JVSU01000001.1 GCA_001053535.1_02067 CDS open 40981-41952 972_na     323_aa oppD Oligopeptide transport ATP-binding protein OppD
2068 JVSU01000001.1 GCA_001053535.1_02068 CDS open 41962-42897 936_na     311_aa oppC Oligopeptide transport system permease protein OppC
2069 JVSU01000001.1 GCA_001053535.1_02069 CDS open 42907-43827 921_na     306_aa oppB Oligopeptide transport system permease protein OppB
2070 JVSU01000001.1 GCA_001053535.1_02070 CDS open 43908-45533 1626_na     541_aa oppA_2 Periplasmic oligopeptide-binding protein
2071 JVSU01000001.1 GCA_001053535.1_02071 CDS open 45826-46779 954_na     317_aa talB Transaldolase B
2072 JVSU01000001.1 GCA_001053535.1_02072 CDS open 46978-47601 624_na     207_aa yagU Inner membrane protein YagU
2073 JVSU01000001.1 GCA_001053535.1_02073 CDS open 47801-48547 747_na     248_aa mlaA Intermembrane phospholipid transport system lipoprotein MlaA
2074 JVSU01000001.1 GCA_001053535.1_02074 CDS open 48628-49017 390_na     129_aa RutC family protein
2075 JVSU01000001.1 GCA_001053535.1_02075 CDS open 49330-49821 492_na     163_aa rplJ 50S ribosomal protein L10
2076 JVSU01000001.1 GCA_001053535.1_02076 CDS open 49876-50247 372_na     123_aa rplL 50S ribosomal protein L7L12
2077 JVSU01000001.1 GCA_001053535.1_02077 CDS open 50543-54571 4029_na     1342_aa rpoB DNA-directed RNA polymerase subunit beta
2078 JVSU01000001.1 GCA_001053535.1_02078 CDS open 54695-58945 4251_na     1416_aa rpoC DNA-directed RNA polymerase subunit beta
2079 JVSU01000001.1 GCA_001053535.1_02079 CDS open 59131-59961 831_na     276_aa metQ putative D-methionine-binding lipoprotein MetQ
2080 JVSU01000001.1 GCA_001053535.1_02080 CDS open 60001-60693 693_na     230_aa metP Methionine import system permease protein MetP
2081 JVSU01000001.1 GCA_001053535.1_02081 CDS open 60683-61720 1038_na     345_aa metN Methionine import ATP-binding protein MetN
2082 JVSU01000001.1 GCA_001053535.1_02082 CDS open 61895-62449 555_na     184_aa gmhB D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase
2083 JVSU01000002.1 GCA_001053535.1_02083 CDS open 170-1690 1521_na     506_aa der GTPase Der
2084 JVSU01000002.1 GCA_001053535.1_02084 CDS open 1758-2297 540_na     179_aa hpt Hypoxanthine phosphoribosyltransferase
2085 JVSU01000002.1 misc_RNA open 2339-2438 HrrF
2086 JVSU01000002.1 GCA_001053535.1_02086 CDS open 2501-3856 1356_na     451_aa pmbA Metalloprotease PmbA
2087 JVSU01000002.1 GCA_001053535.1_02087 CDS open 3945-4481 537_na     178_aa hypothetical protein
2088 JVSU01000002.1 GCA_001053535.1_02088 CDS open 4524-5171 648_na     215_aa lptC Lipopolysaccharide export system protein LptC
2089 JVSU01000002.1 GCA_001053535.1_02089 CDS open 5152-5670 519_na     172_aa lptA Lipopolysaccharide export system protein LptA
2090 JVSU01000002.1 GCA_001053535.1_02090 CDS open 5674-6399 726_na     241_aa lptB Lipopolysaccharide export system ATP-binding protein LptB
2091 JVSU01000002.1 GCA_001053535.1_02091 CDS open 6403-6921 519_na     172_aa ptsN Nitrogen regulatory protein
2092 JVSU01000002.1 GCA_001053535.1_02092 CDS open 6953-7810 858_na     285_aa rapZ RNase adapter protein RapZ
2093 JVSU01000002.1 GCA_001053535.1_02093 CDS open 7851-8531 681_na     226_aa hypothetical protein
2094 JVSU01000002.1 GCA_001053535.1_02094 CDS open 8533-9666 1134_na     377_aa dapE Succinyl-diaminopimelate desuccinylase
2095 JVSU01000002.1 GCA_001053535.1_02095 CDS open 9785-10078 294_na     97_aa hypothetical protein
2096 JVSU01000002.1 GCA_001053535.1_02096 CDS open 10226-11740 1515_na     504_aa hypothetical protein
2097 JVSU01000002.1 GCA_001053535.1_02097 CDS open 11921-12346 426_na     141_aa hypothetical protein
2098 JVSU01000002.1 GCA_001053535.1_02098 CDS open 12426-12770 345_na     114_aa putative protein
2099 JVSU01000002.1 GCA_001053535.1_02099 CDS open 12925-13443 519_na     172_aa putative protein
2100 JVSU01000002.1 GCA_001053535.1_02100 CDS open 13497-13970 474_na     157_aa sprT Protein SprT
2101 JVSU01000002.1 GCA_001053535.1_02101 CDS open 14066-15220 1155_na     384_aa metK S-adenosylmethionine synthase
2102 JVSU01000002.1 GCA_001053535.1_02102 CDS open 15300-15890 591_na     196_aa trpG_2 Anthranilate synthase component 2
2103 JVSU01000002.1 GCA_001053535.1_02103 CDS open 15967-16941 975_na     324_aa menF_2 Isochorismate synthase MenF
2104 JVSU01000002.1 GCA_001053535.1_02104 CDS open 16941-17507 567_na     188_aa hypothetical protein
2105 JVSU01000002.1 GCA_001053535.1_02105 CDS open 17531-19207 1677_na     558_aa recN DNA repair protein RecN
2106 JVSU01000002.1 GCA_001053535.1_02106 CDS open 19284-20174 891_na     296_aa nadK NAD kinase
2107 JVSU01000002.1 GCA_001053535.1_02107 CDS open 20305-20880 576_na     191_aa grpE Protein GrpE
2108 JVSU01000002.1 GCA_001053535.1_02108 CDS open 21146-23272 2127_na     708_aa nrdD Anaerobic ribonucleoside-triphosphate reductase
2109 JVSU01000002.1 GCA_001053535.1_02109 CDS open 23347-23928 582_na     193_aa hypothetical protein
2110 JVSU01000002.1 GCA_001053535.1_02110 CDS open 24076-25473 1398_na     465_aa sdcS_3 Sodium-dependent dicarboxylate transporter SdcS
2111 JVSU01000002.1 GCA_001053535.1_02111 CDS open 25611-26921 1311_na     436_aa xanP Xanthine permease XanP
2112 JVSU01000002.1 GCA_001053535.1_02112 CDS open 27041-27898 858_na     285_aa hypothetical protein
2113 JVSU01000002.1 GCA_001053535.1_02113 CDS open 27988-28941 954_na     317_aa trxB Thioredoxin reductase
2114 JVSU01000002.1 GCA_001053535.1_02114 CDS open 29087-30847 1761_na     586_aa cydD_2 ATP-bindingpermease protein CydD
2115 JVSU01000002.1 GCA_001053535.1_02115 CDS open 30847-32577 1731_na     576_aa msbA_2 Lipid A export ATP-bindingpermease protein MsbA
2116 JVSU01000002.1 misc_RNA open 32604-32702 Bacteria_small_SRP
2117 JVSU01000002.1 GCA_001053535.1_02117 CDS open 32830-33297 468_na     155_aa nrdG Anaerobic ribonucleoside-triphosphate reductase-activating protein
2118 JVSU01000002.1 GCA_001053535.1_02118 CDS open 33294-34082 789_na     262_aa yjjV putative metal-dependent hydrolase YjjV
2119 JVSU01000002.1 GCA_001053535.1_02119 CDS open 34142-34651 510_na     169_aa ppiB Peptidyl-prolyl cis-trans isomerase B