HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_002096075.1)

Select a Genome:
PROKKA Annotations for GCA_002096075.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
1 2579522 2415 7 1 52
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 2560 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:6]    |    Number of Records Found: 2560 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CP020761.1 GCA_002096075.1_02501 CDS open 2523766-2524236 471_na     156_aa ctsR Transcriptional regulator CtsR
2502 CP020761.1 GCA_002096075.1_02502 CDS open 2524381-2525595 1215_na     404_aa nupC_2 Nucleoside permease NupC
2503 CP020761.1 GCA_002096075.1_02503 CDS open 2525826-2526380 555_na     184_aa pdxT Pyridoxal 5-phosphate synthase subunit PdxT
2504 CP020761.1 GCA_002096075.1_02504 CDS open 2526384-2527271 888_na     295_aa pdxS Pyridoxal 5-phosphate synthase subunit PdxS
2505 CP020761.1 GCA_002096075.1_02505 CDS open 2527369-2528751 1383_na     460_aa gabR HTH-type transcriptional regulatory protein GabR
2506 CP020761.1 rRNA open 2529005-2529113 5S ribosomal RNA
2507 CP020761.1 rRNA open 2529185-2532102 23S ribosomal RNA
2508 CP020761.1 rRNA open 2532476-2532872 16S ribosomal RNA (partial)
2509 CP020761.1 tRNA open 2532998-2533073 tRNA-Ala(tgc)
2510 CP020761.1 tRNA open 2533087-2533161 tRNA-Pro(tgg)
2511 CP020761.1 tRNA open 2533184-2533258 tRNA-Arg(acg)
2512 CP020761.1 tRNA open 2533268-2533356 tRNA-Leu(taa)
2513 CP020761.1 tRNA open 2533364-2533438 tRNA-Gly(gcc)
2514 CP020761.1 tRNA open 2533453-2533527 tRNA-Lys(ttt)
2515 CP020761.1 tRNA open 2533533-2533608 tRNA-Thr(tgt)
2516 CP020761.1 tRNA open 2533617-2533692 tRNA-Val(tac)
2517 CP020761.1 rRNA open 2533709-2533817 5S ribosomal RNA
2518 CP020761.1 GCA_002096075.1_02518 CDS open 2534229-2535716 1488_na     495_aa lysS Lysine--tRNA ligase
2519 CP020761.1 GCA_002096075.1_02519 CDS open 2536241-2536720 480_na     159_aa folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2520 CP020761.1 GCA_002096075.1_02520 CDS open 2536721-2537086 366_na     121_aa folB Dihydroneopterin aldolase
2521 CP020761.1 GCA_002096075.1_02521 CDS open 2537064-2537867 804_na     267_aa folP Dihydropteroate synthase
2522 CP020761.1 GCA_002096075.1_02522 CDS open 2538089-2539021 933_na     310_aa cysK Cysteine synthase
2523 CP020761.1 GCA_002096075.1_02523 CDS open 2539198-2540082 885_na     294_aa hslO 33 kDa chaperonin
2524 CP020761.1 GCA_002096075.1_02524 CDS open 2540263-2542350 2088_na     695_aa ftsH ATP-dependent zinc metalloprotease FtsH
2525 CP020761.1 GCA_002096075.1_02525 CDS open 2542628-2543167 540_na     179_aa hpt Hypoxanthine-guanine phosphoribosyltransferase
2526 CP020761.1 GCA_002096075.1_02526 CDS open 2543170-2544462 1293_na     430_aa tilS tRNA(Ile)-lysidine synthase
2527 CP020761.1 GCA_002096075.1_02527 CDS open 2544566-2544964 399_na     132_aa yugI_2 General stress protein 13
2528 CP020761.1 GCA_002096075.1_02528 CDS open 2545132-2545530 399_na     132_aa divIC Cell division protein DivIC
2529 CP020761.1 GCA_002096075.1_02529 CDS open 2545554-2545832 279_na     92_aa hypothetical protein
2530 CP020761.1 GCA_002096075.1_02530 CDS open 2545829-2547019 1191_na     396_aa hypothetical protein
2531 CP020761.1 GCA_002096075.1_02531 CDS open 2547021-2548550 1530_na     509_aa hypothetical protein
2532 CP020761.1 GCA_002096075.1_02532 CDS open 2548528-2552049 3522_na     1173_aa mfd Transcription-repair-coupling factor
2533 CP020761.1 GCA_002096075.1_02533 CDS open 2552046-2552618 573_na     190_aa pth Peptidyl-tRNA hydrolase
2534 CP020761.1 GCA_002096075.1_02534 CDS open 2552942-2553592 651_na     216_aa rplY 50S ribosomal protein L25
2535 CP020761.1 GCA_002096075.1_02535 CDS open 2553750-2554715 966_na     321_aa prs Ribose-phosphate pyrophosphokinase
2536 CP020761.1 GCA_002096075.1_02536 CDS open 2554868-2556223 1356_na     451_aa glmU Bifunctional protein GlmU
2537 CP020761.1 GCA_002096075.1_02537 CDS open 2556431-2556736 306_na     101_aa spoVG Putative septation protein SpoVG
2538 CP020761.1 GCA_002096075.1_02538 CDS open 2556808-2557185 378_na     125_aa yabJ 2-iminobutanoate2-iminopropanoate deaminase
2539 CP020761.1 GCA_002096075.1_02539 CDS open 2557202-2558026 825_na     274_aa purR_3 Pur operon repressor
2540 CP020761.1 GCA_002096075.1_02540 CDS open 2558040-2558888 849_na     282_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2541 CP020761.1 GCA_002096075.1_02541 CDS open 2559135-2559398 264_na     87_aa veg Protein Veg
2542 CP020761.1 GCA_002096075.1_02542 CDS open 2559498-2560388 891_na     296_aa rsmA Ribosomal RNA small subunit methyltransferase A
2543 CP020761.1 GCA_002096075.1_02543 CDS open 2560388-2560939 552_na     183_aa rnmV_2 Ribonuclease M5
2544 CP020761.1 GCA_002096075.1_02544 CDS open 2561079-2561849 771_na     256_aa dtd3 D-aminoacyl-tRNA deacylase
2545 CP020761.1 GCA_002096075.1_02545 CDS open 2561875-2563848 1974_na     657_aa metG Methionine--tRNA ligase
2546 CP020761.1 GCA_002096075.1_02546 CDS open 2564077-2564922 846_na     281_aa rsmI Ribosomal RNA small subunit methyltransferase I
2547 CP020761.1 GCA_002096075.1_02547 CDS open 2564924-2565172 249_na     82_aa hypothetical protein
2548 CP020761.1 GCA_002096075.1_02548 CDS open 2565165-2565890 726_na     241_aa yfiC tRNA1(Val) (adenine(37)-N6)-methyltransferase
2549 CP020761.1 GCA_002096075.1_02549 CDS open 2565983-2566330 348_na     115_aa yabA Initiation-control protein YabA
2550 CP020761.1 GCA_002096075.1_02550 CDS open 2566347-2567150 804_na     267_aa hypothetical protein
2551 CP020761.1 GCA_002096075.1_02551 CDS open 2567151-2568077 927_na     308_aa hypothetical protein
2552 CP020761.1 GCA_002096075.1_02552 CDS open 2568374-2568703 330_na     109_aa darA Cyclic di-AMP receptor A
2553 CP020761.1 GCA_002096075.1_02553 CDS open 2568731-2569348 618_na     205_aa tmk Thymidylate kinase
2554 CP020761.1 GCA_002096075.1_02554 CDS open 2569352-2570695 1344_na     447_aa speA Arginine decarboxylase
2555 CP020761.1 GCA_002096075.1_02555 CDS open 2570721-2571248 528_na     175_aa speG Spermidine N(1)-acetyltransferase
2556 CP020761.1 misc_RNA open 2571481-2571713 S35
2557 CP020761.1 GCA_002096075.1_02557 CDS open 2571793-2573490 1698_na     565_aa hypothetical protein
2558 CP020761.1 GCA_002096075.1_02558 CDS open 2573483-2577628 4146_na     1381_aa hypothetical protein
2559 CP020761.1 GCA_002096075.1_02559 CDS open 2577895-2579211 1317_na     438_aa ISL3 family transposase ISSha1
2560 CP020761.1 rRNA open 2579411-2579519 5S ribosomal RNA