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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Limosilactobacillus fermentum (GCA_002192435.1)

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PROKKA Annotations for GCA_002192435.1
Genome Selected: Limosilactobacillus fermentum
ContigsBases CDSrRNA tmRNAtRNA
1 2063606 2023 20 1 62
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Annotation Table [page:5]    |    Number of Records Found: 2134 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CP021790.1 GCA_002192435.1_02001 CDS open 1937985-1938950 966_na     321_aa hypothetical protein
2002 CP021790.1 GCA_002192435.1_02002 CDS open 1940329-1941207 879_na     292_aa IS3 family transposase ISBce13
2003 CP021790.1 GCA_002192435.1_02003 CDS open 1941231-1941518 288_na     95_aa hypothetical protein
2004 CP021790.1 GCA_002192435.1_02004 CDS open 1941784-1942128 345_na     114_aa hypothetical protein
2005 CP021790.1 GCA_002192435.1_02005 CDS open 1942093-1942755 663_na     220_aa hypothetical protein
2006 CP021790.1 GCA_002192435.1_02006 CDS open 1943336-1944706 1371_na     456_aa hypothetical protein
2007 CP021790.1 GCA_002192435.1_02007 CDS open 1944769-1945158 390_na     129_aa hypothetical protein
2008 CP021790.1 GCA_002192435.1_02008 CDS open 1945168-1945488 321_na     106_aa hypothetical protein
2009 CP021790.1 GCA_002192435.1_02009 CDS open 1945713-1945814 102_na     33_aa hypothetical protein
2010 CP021790.1 GCA_002192435.1_02010 CDS open 1946001-1946501 501_na     166_aa insK_2 Putative transposase InsK for insertion sequence element IS150
2011 CP021790.1 GCA_002192435.1_02011 CDS open 1946593-1947159 567_na     188_aa narH Respiratory nitrate reductase 1 beta chain
2012 CP021790.1 GCA_002192435.1_02012 CDS open 1947101-1947730 630_na     209_aa hypothetical protein
2013 CP021790.1 GCA_002192435.1_02013 CDS open 1947723-1948412 690_na     229_aa narX Nitrate reductase-like protein NarX
2014 CP021790.1 GCA_002192435.1_02014 CDS open 1948463-1948918 456_na     151_aa hypothetical protein
2015 CP021790.1 GCA_002192435.1_02015 CDS open 1948992-1949597 606_na     201_aa hypothetical protein
2016 CP021790.1 tRNA open 1949879-1949953 tRNA-Thr(cgt)
2017 CP021790.1 tRNA open 1949999-1950073 tRNA-Asn(gtt)
2018 CP021790.1 rRNA open 1950081-1950192 5S ribosomal RNA
2019 CP021790.1 GCA_002192435.1_02019 CDS open 1950528-1950923 396_na     131_aa hypothetical protein
2020 CP021790.1 GCA_002192435.1_02020 CDS open 1951011-1951220 210_na     69_aa cas2 CRISPR-associated endoribonuclease Cas2
2021 CP021790.1 GCA_002192435.1_02021 CDS open 1951183-1952088 906_na     301_aa cas1 CRISPR-associated endonuclease Cas1
2022 CP021790.1 GCA_002192435.1_02022 CDS open 1952283-1952417 135_na     44_aa hypothetical protein
2023 CP021790.1 GCA_002192435.1_02023 CDS open 1952414-1953004 591_na     196_aa IS256 family transposase ISCARN68
2024 CP021790.1 GCA_002192435.1_02024 CDS open 1953304-1953756 453_na     150_aa hypothetical protein
2025 CP021790.1 GCA_002192435.1_02025 CDS open 1953835-1955085 1251_na     416_aa IS200IS605 family transposase ISMmu1
2026 CP021790.1 GCA_002192435.1_02026 CDS open 1955820-1957040 1221_na     406_aa IS256 family transposase ISCARN68
2027 CP021790.1 GCA_002192435.1_02027 CDS open 1957037-1957447 411_na     136_aa hypothetical protein
2028 CP021790.1 GCA_002192435.1_02028 CDS open 1957477-1957680 204_na     67_aa hypothetical protein
2029 CP021790.1 GCA_002192435.1_02029 CDS open 1957754-1959004 1251_na     416_aa IS200IS605 family transposase ISLjo5
2030 CP021790.1 GCA_002192435.1_02030 CDS open 1959340-1959561 222_na     73_aa hypothetical protein
2031 CP021790.1 GCA_002192435.1_02031 CDS open 1959730-1960284 555_na     184_aa ISL3 family transposase ISLjo2
2032 CP021790.1 GCA_002192435.1_02032 CDS open 1960589-1961809 1221_na     406_aa IS256 family transposase ISCARN68
2033 CP021790.1 GCA_002192435.1_02033 CDS open 1961806-1961940 135_na     44_aa hypothetical protein
2034 CP021790.1 tRNA open 1962222-1962294 tRNA-Glu(ttc)
2035 CP021790.1 GCA_002192435.1_02035 CDS open 1962414-1962869 456_na     151_aa hypothetical protein
2036 CP021790.1 GCA_002192435.1_02036 CDS open 1962943-1964193 1251_na     416_aa IS200IS605 family transposase ISLjo5
2037 CP021790.1 rRNA open 1964872-1966444 16S ribosomal RNA
2038 CP021790.1 tRNA open 1966533-1966609 tRNA-Ile(gat)
2039 CP021790.1 tRNA open 1966611-1966685 tRNA-Ala(tgc)
2040 CP021790.1 rRNA open 1966839-1969755 23S ribosomal RNA
2041 CP021790.1 rRNA open 1969825-1969936 5S ribosomal RNA
2042 CP021790.1 GCA_002192435.1_02042 CDS open 1970607-1971965 1359_na     452_aa IS4 family transposase ISLre1
2043 CP021790.1 GCA_002192435.1_02043 CDS open 1972335-1973321 987_na     328_aa IS30 family transposase ISSlu1
2044 CP021790.1 GCA_002192435.1_02044 CDS open 1973758-1974726 969_na     322_aa IS4 family transposase ISLre1
2045 CP021790.1 GCA_002192435.1_02045 CDS open 1974854-1975108 255_na     84_aa hypothetical protein
2046 CP021790.1 GCA_002192435.1_02046 CDS open 1975411-1976598 1188_na     395_aa IS256 family transposase IS1310
2047 CP021790.1 GCA_002192435.1_02047 CDS open 1977059-1978246 1188_na     395_aa IS256 family transposase IS1310
2048 CP021790.1 GCA_002192435.1_02048 CDS open 1978308-1978496 189_na     62_aa ptsI_3 Phosphoenolpyruvate-protein phosphotransferase
2049 CP021790.1 GCA_002192435.1_02049 CDS open 1978900-1979508 609_na     202_aa IS30 family transposase IS1070
2050 CP021790.1 GCA_002192435.1_02050 CDS open 1980133-1980222 90_na     29_aa hypothetical protein
2051 CP021790.1 GCA_002192435.1_02051 CDS open 1980293-1981291 999_na     332_aa IS30 family transposase ISSlu1
2052 CP021790.1 GCA_002192435.1_02052 CDS open 1981453-1981773 321_na     106_aa hypothetical protein
2053 CP021790.1 GCA_002192435.1_02053 CDS open 1981770-1982990 1221_na     406_aa IS256 family transposase ISCARN68
2054 CP021790.1 GCA_002192435.1_02054 CDS open 1983237-1984412 1176_na     391_aa IS200IS605 family transposase ISLhe65
2055 CP021790.1 GCA_002192435.1_02055 CDS open 1984964-1985089 126_na     41_aa hypothetical protein
2056 CP021790.1 GCA_002192435.1_02056 CDS open 1985725-1986579 855_na     284_aa IS3 family transposase ISEnfa5
2057 CP021790.1 GCA_002192435.1_02057 CDS open 1986931-1987629 699_na     232_aa hypothetical protein
2058 CP021790.1 GCA_002192435.1_02058 CDS open 1987626-1987982 357_na     118_aa hypothetical protein
2059 CP021790.1 GCA_002192435.1_02059 CDS open 1989233-1990483 1251_na     416_aa IS200IS605 family transposase ISLjo5
2060 CP021790.1 GCA_002192435.1_02060 CDS open 1990557-1991012 456_na     151_aa hypothetical protein
2061 CP021790.1 GCA_002192435.1_02061 CDS open 1991513-1992676 1164_na     387_aa IS200IS605 family transposase ISLhe65
2062 CP021790.1 GCA_002192435.1_02062 CDS open 1993255-1993371 117_na     38_aa hypothetical protein
2063 CP021790.1 GCA_002192435.1_02063 CDS open 1993644-1994186 543_na     180_aa insK_3 Putative transposase InsK for insertion sequence element IS150
2064 CP021790.1 GCA_002192435.1_02064 CDS open 1994462-1994686 225_na     74_aa gmuE_2 Putative fructokinase
2065 CP021790.1 GCA_002192435.1_02065 CDS open 1994700-1996052 1353_na     450_aa pgi_5 Glucose-6-phosphate isomerase
2066 CP021790.1 GCA_002192435.1_02066 CDS open 1996300-1997475 1176_na     391_aa IS200IS605 family transposase ISLhe65
2067 CP021790.1 GCA_002192435.1_02067 CDS open 1997840-1999027 1188_na     395_aa IS256 family transposase IS1310
2068 CP021790.1 GCA_002192435.1_02068 CDS open 1999191-1999340 150_na     49_aa hypothetical protein
2069 CP021790.1 GCA_002192435.1_02069 CDS open 1999735-2000985 1251_na     416_aa IS200IS605 family transposase ISMmu1
2070 CP021790.1 GCA_002192435.1_02070 CDS open 2001064-2001516 453_na     150_aa hypothetical protein
2071 CP021790.1 GCA_002192435.1_02071 CDS open 2001724-2001921 198_na     65_aa hypothetical protein
2072 CP021790.1 GCA_002192435.1_02072 CDS open 2002107-2003357 1251_na     416_aa IS200IS605 family transposase ISMmu1
2073 CP021790.1 GCA_002192435.1_02073 CDS open 2003436-2003888 453_na     150_aa hypothetical protein
2074 CP021790.1 GCA_002192435.1_02074 CDS open 2003986-2004240 255_na     84_aa hypothetical protein
2075 CP021790.1 GCA_002192435.1_02075 CDS open 2004360-2004812 453_na     150_aa hypothetical protein
2076 CP021790.1 GCA_002192435.1_02076 CDS open 2004891-2006180 1290_na     429_aa IS200IS605 family transposase ISMmu1
2077 CP021790.1 GCA_002192435.1_02077 CDS open 2006314-2007312 999_na     332_aa IS30 family transposase ISSlu1
2078 CP021790.1 GCA_002192435.1_02078 CDS open 2007843-2009093 1251_na     416_aa IS200IS605 family transposase ISMmu1
2079 CP021790.1 GCA_002192435.1_02079 CDS open 2009172-2009588 417_na     138_aa hypothetical protein
2080 CP021790.1 GCA_002192435.1_02080 CDS open 2009830-2011080 1251_na     416_aa IS200IS605 family transposase ISLjo5
2081 CP021790.1 GCA_002192435.1_02081 CDS open 2011154-2011609 456_na     151_aa hypothetical protein
2082 CP021790.1 GCA_002192435.1_02082 CDS open 2011660-2011956 297_na     98_aa hypothetical protein
2083 CP021790.1 GCA_002192435.1_02083 CDS open 2013284-2014186 903_na     300_aa IS256 family transposase IS1201
2084 CP021790.1 GCA_002192435.1_02084 CDS open 2014226-2014471 246_na     81_aa IS256 family transposase ISEfa13
2085 CP021790.1 GCA_002192435.1_02085 CDS open 2014897-2016084 1188_na     395_aa IS256 family transposase IS1310
2086 CP021790.1 GCA_002192435.1_02086 CDS open 2017045-2017383 339_na     112_aa hypothetical protein
2087 CP021790.1 GCA_002192435.1_02087 CDS open 2017380-2018078 699_na     232_aa hypothetical protein
2088 CP021790.1 GCA_002192435.1_02088 CDS open 2018478-2019836 1359_na     452_aa IS4 family transposase ISLre1
2089 CP021790.1 GCA_002192435.1_02089 CDS open 2019897-2020901 1005_na     334_aa IS200IS605 family transposase ISLhe65
2090 CP021790.1 rRNA open 2021625-2022652 23S ribosomal RNA (partial)
2091 CP021790.1 rRNA open 2022722-2022833 5S ribosomal RNA
2092 CP021790.1 tRNA open 2022841-2022915 tRNA-Asn(gtt)
2093 CP021790.1 rRNA open 2022983-2023858 16S ribosomal RNA (partial)
2094 CP021790.1 GCA_002192435.1_02094 CDS open 2024499-2025497 999_na     332_aa IS30 family transposase ISSlu1
2095 CP021790.1 GCA_002192435.1_02095 CDS open 2025871-2027157 1287_na     428_aa ISL3 family transposase ISL3
2096 CP021790.1 GCA_002192435.1_02096 CDS open 2027492-2028490 999_na     332_aa IS200IS605 family transposase ISLhe65
2097 CP021790.1 GCA_002192435.1_02097 CDS open 2028945-2029130 186_na     61_aa hypothetical protein
2098 CP021790.1 GCA_002192435.1_02098 CDS open 2029900-2030745 846_na     281_aa IS3 family transposase ISEnfa5
2099 CP021790.1 rRNA open 2031670-2033600 23S ribosomal RNA (partial)
2100 CP021790.1 rRNA open 2033801-2034422 16S ribosomal RNA (partial)
2101 CP021790.1 GCA_002192435.1_02101 CDS open 2035493-2035690 198_na     65_aa hypothetical protein
2102 CP021790.1 GCA_002192435.1_02102 CDS open 2035645-2036097 453_na     150_aa hypothetical protein
2103 CP021790.1 GCA_002192435.1_02103 CDS open 2036176-2037426 1251_na     416_aa IS200IS605 family transposase ISMmu1
2104 CP021790.1 GCA_002192435.1_02104 CDS open 2038023-2038379 357_na     118_aa hypothetical protein
2105 CP021790.1 rRNA open 2039681-2040329 16S ribosomal RNA (partial)
2106 CP021790.1 GCA_002192435.1_02106 CDS open 2040703-2041788 1086_na     361_aa IS4 family transposase ISLre1
2107 CP021790.1 GCA_002192435.1_02107 CDS open 2042062-2042211 150_na     49_aa hypothetical protein
2108 CP021790.1 GCA_002192435.1_02108 CDS open 2042405-2042986 582_na     193_aa hypothetical protein
2109 CP021790.1 GCA_002192435.1_02109 CDS open 2042951-2043256 306_na     101_aa hypothetical protein
2110 CP021790.1 GCA_002192435.1_02110 CDS open 2043250-2043492 243_na     80_aa hypothetical protein
2111 CP021790.1 GCA_002192435.1_02111 CDS open 2044076-2044963 888_na     295_aa IS200IS605 family transposase ISLhe65
2112 CP021790.1 GCA_002192435.1_02112 CDS open 2046251-2046829 579_na     192_aa hypothetical protein
2113 CP021790.1 GCA_002192435.1_02113 CDS open 2047480-2047932 453_na     150_aa hypothetical protein
2114 CP021790.1 GCA_002192435.1_02114 CDS open 2048011-2048370 360_na     119_aa hypothetical protein
2115 CP021790.1 GCA_002192435.1_02115 CDS open 2048360-2048503 144_na     47_aa purD_2 Phosphoribosylamine--glycine ligase
2116 CP021790.1 GCA_002192435.1_02116 CDS open 2048633-2049085 453_na     150_aa hypothetical protein
2117 CP021790.1 GCA_002192435.1_02117 CDS open 2049164-2049865 702_na     233_aa IS200IS605 family transposase ISLjo5
2118 CP021790.1 GCA_002192435.1_02118 CDS open 2049670-2050308 639_na     212_aa hypothetical protein
2119 CP021790.1 GCA_002192435.1_02119 CDS open 2050382-2050525 144_na     47_aa hypothetical protein
2120 CP021790.1 GCA_002192435.1_02120 CDS open 2050528-2050773 246_na     81_aa hypothetical protein
2121 CP021790.1 GCA_002192435.1_02121 CDS open 2051040-2051141 102_na     33_aa hypothetical protein
2122 CP021790.1 GCA_002192435.1_02122 CDS open 2051328-2051984 657_na     218_aa insK_4 Putative transposase InsK for insertion sequence element IS150
2123 CP021790.1 GCA_002192435.1_02123 CDS open 2052770-2052865 96_na     31_aa hypothetical protein
2124 CP021790.1 GCA_002192435.1_02124 CDS open 2053068-2053766 699_na     232_aa hypothetical protein
2125 CP021790.1 GCA_002192435.1_02125 CDS open 2053763-2054620 858_na     285_aa IS3 family transposase ISSth1b
2126 CP021790.1 GCA_002192435.1_02126 CDS open 2054820-2055800 981_na     326_aa IS256 family transposase IS1201
2127 CP021790.1 rRNA open 2056316-2057189 16S ribosomal RNA (partial)
2128 CP021790.1 GCA_002192435.1_02128 CDS open 2057286-2058290 1005_na     334_aa IS200IS605 family transposase ISLhe65
2129 CP021790.1 tRNA open 2058863-2058948 tRNA-Leu(aag)
2130 CP021790.1 GCA_002192435.1_02130 CDS open 2059184-2060107 924_na     307_aa IS30 family transposase IS1070
2131 CP021790.1 GCA_002192435.1_02131 CDS open 2062460-2062738 279_na     92_aa hypothetical protein
2132 CP021790.1 GCA_002192435.1_02132 CDS open 2062812-2063267 456_na     151_aa hypothetical protein
2133 CP021790.1 tRNA open 2063387-2063459 tRNA-Glu(ttc)
2134 CP021790.1 tRNA open 2063468-2063543 tRNA-Met(cat)