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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Limosilactobacillus fermentum (GCA_003255875.1)

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PROKKA Annotations for GCA_003255875.1
Genome Selected: Limosilactobacillus fermentum
ContigsBases CDSrRNA tmRNAtRNA
1 2042277 1974 15 1 59
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2077 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CP021964.1 GCA_003255875.1_02001 CDS open 1964803-1965426 624_na     207_aa hypothetical protein
2002 CP021964.1 GCA_003255875.1_02002 CDS open 1965396-1966022 627_na     208_aa pinR Serine recombinase PinR
2003 CP021964.1 GCA_003255875.1_02003 CDS open 1966502-1966891 390_na     129_aa hypothetical protein
2004 CP021964.1 GCA_003255875.1_02004 CDS open 1967083-1967571 489_na     162_aa hypothetical protein
2005 CP021964.1 GCA_003255875.1_02005 CDS open 1967641-1968537 897_na     298_aa hemH Ferrochelatase
2006 CP021964.1 GCA_003255875.1_02006 CDS open 1968561-1969940 1380_na     459_aa bmr3 Multidrug resistance protein 3
2007 CP021964.1 GCA_003255875.1_02007 CDS open 1970545-1971765 1221_na     406_aa IS256 family transposase ISCARN68
2008 CP021964.1 GCA_003255875.1_02008 CDS open 1972343-1972507 165_na     54_aa hypothetical protein
2009 CP021964.1 GCA_003255875.1_02009 CDS open 1972560-1974755 2196_na     731_aa copB Copper-exporting P-type ATPase B
2010 CP021964.1 GCA_003255875.1_02010 CDS open 1975006-1975437 432_na     143_aa copY_2 Transcriptional repressor CopY
2011 CP021964.1 GCA_003255875.1_02011 CDS open 1976022-1976603 582_na     193_aa bin3_2 Putative transposon Tn552 DNA-invertase bin3
2012 CP021964.1 GCA_003255875.1_02012 CDS open 1976932-1977603 672_na     223_aa hrtA Putative hemin import ATP-binding protein HrtA
2013 CP021964.1 GCA_003255875.1_02013 CDS open 1977608-1978654 1047_na     348_aa hypothetical protein
2014 CP021964.1 GCA_003255875.1_02014 CDS open 1978694-1979029 336_na     111_aa hypothetical protein
2015 CP021964.1 GCA_003255875.1_02015 CDS open 1979245-1980123 879_na     292_aa IS3 family transposase ISBce13
2016 CP021964.1 GCA_003255875.1_02016 CDS open 1980147-1980434 288_na     95_aa hypothetical protein
2017 CP021964.1 GCA_003255875.1_02017 CDS open 1980687-1980950 264_na     87_aa hypothetical protein
2018 CP021964.1 GCA_003255875.1_02018 CDS open 1981033-1981383 351_na     116_aa hypothetical protein
2019 CP021964.1 GCA_003255875.1_02019 CDS open 1981380-1981727 348_na     115_aa hypothetical protein
2020 CP021964.1 GCA_003255875.1_02020 CDS open 1982484-1984427 1944_na     647_aa lacS Lactose permease
2021 CP021964.1 GCA_003255875.1_02021 CDS open 1984503-1986725 2223_na     740_aa agaA Alpha-galactosidase AgaA
2022 CP021964.1 GCA_003255875.1_02022 CDS open 1986940-1987941 1002_na     333_aa melR HTH-type transcriptional repressor MelR
2023 CP021964.1 GCA_003255875.1_02023 CDS open 1987969-1989423 1455_na     484_aa galT Galactose-1-phosphate uridylyltransferase
2024 CP021964.1 GCA_003255875.1_02024 CDS open 1989451-1990617 1167_na     388_aa galK_2 Galactokinase
2025 CP021964.1 GCA_003255875.1_02025 CDS open 1990789-1991739 951_na     316_aa hypothetical protein
2026 CP021964.1 GCA_003255875.1_02026 CDS open 1991745-1992533 789_na     262_aa hypothetical protein
2027 CP021964.1 GCA_003255875.1_02027 CDS open 1992552-1993064 513_na     170_aa hypothetical protein
2028 CP021964.1 GCA_003255875.1_02028 CDS open 1993077-1993301 225_na     74_aa hypothetical protein
2029 CP021964.1 GCA_003255875.1_02029 CDS open 1993417-1994151 735_na     244_aa artM_2 Arginine transport ATP-binding protein ArtM
2030 CP021964.1 GCA_003255875.1_02030 CDS open 1994153-1994842 690_na     229_aa tcyB_2 L-cystine transport system permease protein TcyB
2031 CP021964.1 GCA_003255875.1_02031 CDS open 1994945-1995745 801_na     266_aa putative amino-acid ABC transporter-binding protein
2032 CP021964.1 GCA_003255875.1_02032 CDS open 1995884-1996210 327_na     108_aa hypothetical protein
2033 CP021964.1 GCA_003255875.1_02033 CDS open 1996312-1997250 939_na     312_aa ghrB Glyoxylatehydroxypyruvate reductase B
2034 CP021964.1 GCA_003255875.1_02034 CDS open 1997252-1997734 483_na     160_aa greA_2 Transcription elongation factor GreA
2035 CP021964.1 GCA_003255875.1_02035 CDS open 1997951-1998745 795_na     264_aa hypothetical protein
2036 CP021964.1 GCA_003255875.1_02036 CDS open 1998852-1999361 510_na     169_aa ymdB O-acetyl-ADP-ribose deacetylase
2037 CP021964.1 GCA_003255875.1_02037 CDS open 1999370-2001274 1905_na     634_aa pepO Neutral endopeptidase
2038 CP021964.1 GCA_003255875.1_02038 CDS open 2001534-2002844 1311_na     436_aa pbuG Guaninehypoxanthine permease PbuG
2039 CP021964.1 GCA_003255875.1_02039 CDS open 2002941-2003225 285_na     94_aa hypothetical protein
2040 CP021964.1 GCA_003255875.1_02040 CDS open 2003227-2004426 1200_na     399_aa hypothetical protein
2041 CP021964.1 GCA_003255875.1_02041 CDS open 2004380-2005522 1143_na     380_aa hypothetical protein
2042 CP021964.1 GCA_003255875.1_02042 CDS open 2005524-2006153 630_na     209_aa Putative 3-methyladenine DNA glycosylase
2043 CP021964.1 GCA_003255875.1_02043 CDS open 2006216-2006581 366_na     121_aa hypothetical protein
2044 CP021964.1 GCA_003255875.1_02044 CDS open 2006872-2007057 186_na     61_aa hypothetical protein
2045 CP021964.1 GCA_003255875.1_02045 CDS open 2007058-2007732 675_na     224_aa kefG Glutathione-regulated potassium-efflux system ancillary protein KefG
2046 CP021964.1 GCA_003255875.1_02046 CDS open 2007735-2008058 324_na     107_aa hypothetical protein
2047 CP021964.1 GCA_003255875.1_02047 CDS open 2008152-2008778 627_na     208_aa nnr Bifunctional NAD(P)H-hydrate repair enzyme Nnr
2048 CP021964.1 GCA_003255875.1_02048 CDS open 2008959-2009516 558_na     185_aa efp Elongation factor P
2049 CP021964.1 GCA_003255875.1_02049 CDS open 2009663-2010295 633_na     210_aa hypothetical protein
2050 CP021964.1 GCA_003255875.1_02050 CDS open 2010474-2010665 192_na     63_aa hypothetical protein
2051 CP021964.1 GCA_003255875.1_02051 CDS open 2010711-2011658 948_na     315_aa degA_3 HTH-type transcriptional regulator DegA
2052 CP021964.1 GCA_003255875.1_02052 CDS open 2012088-2014151 2064_na     687_aa hypothetical protein
2053 CP021964.1 GCA_003255875.1_02053 CDS open 2014288-2014590 303_na     100_aa ziaR Transcriptional repressor SmtB
2054 CP021964.1 GCA_003255875.1_02054 CDS open 2014773-2015231 459_na     152_aa argR_2 Arginine repressor
2055 CP021964.1 GCA_003255875.1_02055 CDS open 2015393-2016085 693_na     230_aa lolD Lipoprotein-releasing system ATP-binding protein LolD
2056 CP021964.1 GCA_003255875.1_02056 CDS open 2016098-2017123 1026_na     341_aa hypothetical protein
2057 CP021964.1 GCA_003255875.1_02057 CDS open 2017083-2017685 603_na     200_aa hypothetical protein
2058 CP021964.1 GCA_003255875.1_02058 CDS open 2017842-2018852 1011_na     336_aa rspB Starvation-sensing protein RspB
2059 CP021964.1 GCA_003255875.1_02059 CDS open 2019148-2020710 1563_na     520_aa mntH_2 Divalent metal cation transporter MntH
2060 CP021964.1 GCA_003255875.1_02060 CDS open 2021094-2021840 747_na     248_aa hypothetical protein
2061 CP021964.1 GCA_003255875.1_02061 CDS open 2022156-2023961 1806_na     601_aa thrS Threonine--tRNA ligase
2062 CP021964.1 GCA_003255875.1_02062 CDS open 2024106-2024720 615_na     204_aa hypothetical protein
2063 CP021964.1 GCA_003255875.1_02063 CDS open 2024726-2025604 879_na     292_aa hypothetical protein
2064 CP021964.1 GCA_003255875.1_02064 CDS open 2025799-2026410 612_na     203_aa spsB Signal peptidase IB
2065 CP021964.1 GCA_003255875.1_02065 CDS open 2026485-2028041 1557_na     518_aa murE_1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase
2066 CP021964.1 GCA_003255875.1_02066 CDS open 2028046-2029581 1536_na     511_aa murE_2 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase
2067 CP021964.1 GCA_003255875.1_02067 CDS open 2029581-2031491 1911_na     636_aa asnB_2 Asparagine synthetase [glutamine-hydrolyzing] 1
2068 CP021964.1 GCA_003255875.1_02068 CDS open 2031753-2033219 1467_na     488_aa lysP_2 Lysine-specific permease
2069 CP021964.1 GCA_003255875.1_02069 CDS open 2033330-2033707 378_na     125_aa mscL Large-conductance mechanosensitive channel
2070 CP021964.1 GCA_003255875.1_02070 CDS open 2033817-2034269 453_na     150_aa hypothetical protein
2071 CP021964.1 GCA_003255875.1_02071 CDS open 2034348-2035598 1251_na     416_aa IS200IS605 family transposase ISMmu1
2072 CP021964.1 GCA_003255875.1_02072 CDS open 2035972-2037876 1905_na     634_aa mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
2073 CP021964.1 GCA_003255875.1_02073 CDS open 2037891-2039279 1389_na     462_aa mnmE tRNA modification GTPase MnmE
2074 CP021964.1 GCA_003255875.1_02074 CDS open 2039425-2040285 861_na     286_aa hypothetical protein
2075 CP021964.1 GCA_003255875.1_02075 CDS open 2040316-2041149 834_na     277_aa misCA Membrane protein insertase MisCA
2076 CP021964.1 GCA_003255875.1_02076 CDS open 2041165-2041509 345_na     114_aa rnpA Ribonuclease P protein component
2077 CP021964.1 GCA_003255875.1_02077 CDS open 2041625-2041759 135_na     44_aa rpmH 50S ribosomal protein L34