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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Pseudomonas fluorescens (GCA_003417575.1)

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PROKKA Annotations for GCA_003417575.1
Genome Selected: Pseudomonas fluorescens
ContigsBases CDSrRNA tmRNAtRNA
279 6,447,692 6398 7 1 66
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:14]    |    Number of Records Found: 6566 [14 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  11  12  13  14  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
6501 QVNA01000220.1 GCA_003417575.1_06501 CDS open 86-370 285_na     94_aa phnL Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL
6502 QVNA01000220.1 GCA_003417575.1_06502 CDS open 360-1352 993_na     330_aa phnM Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase
6503 QVNA01000220.1 GCA_003417575.1_06503 CDS open 1307-1912 606_na     201_aa phnN Ribose 1%2C5-bisphosphate phosphokinase PhnN
6504 QVNA01000221.1 tRNA open 48-123 tRNA-Val(tac)
6505 QVNA01000221.1 tRNA open 300-376 tRNA-Asp(gtc)
6506 QVNA01000221.1 tRNA open 396-471 tRNA-Val(tac)
6507 QVNA01000221.1 GCA_003417575.1_06507 CDS open 631-1551 921_na     306_aa rdgC Recombination-associated protein RdgC
6508 QVNA01000222.1 GCA_003417575.1_06508 CDS open 31-516 486_na     161_aa fecE_2 Fe(3+) dicitrate transport ATP-binding protein FecE
6509 QVNA01000222.1 GCA_003417575.1_06509 CDS open 547-1044 498_na     165_aa hypothetical protein
6510 QVNA01000222.1 GCA_003417575.1_06510 CDS open 1041-1265 225_na     74_aa hypothetical protein
6511 QVNA01000222.1 GCA_003417575.1_06511 CDS open 1323-1631 309_na     102_aa hypothetical protein
6512 QVNA01000222.1 GCA_003417575.1_06512 CDS open 1591-1881 291_na     96_aa hypothetical protein
6513 QVNA01000223.1 GCA_003417575.1_06513 CDS open 504-1874 1371_na     456_aa cheA_4 Chemotaxis protein CheA
6514 QVNA01000224.1 GCA_003417575.1_06514 CDS open 171-743 573_na     190_aa yscN_1 putative ATP synthase YscN
6515 QVNA01000224.1 GCA_003417575.1_06515 CDS open 689-949 261_na     86_aa hypothetical protein
6516 QVNA01000224.1 GCA_003417575.1_06516 CDS open 1001-1498 498_na     165_aa yscN_2 putative ATP synthase YscN
6517 QVNA01000225.1 GCA_003417575.1_06517 CDS open 392-946 555_na     184_aa hypothetical protein
6518 QVNA01000225.1 GCA_003417575.1_06518 CDS open 1137-1544 408_na     135_aa exbD_4 Biopolymer transport protein ExbD
6519 QVNA01000226.1 rRNA open 66-1597 16S ribosomal RNA
6520 QVNA01000227.1 GCA_003417575.1_06520 CDS open 58-888 831_na     276_aa uspE_4 Universal stress protein E
6521 QVNA01000228.1 GCA_003417575.1_06521 CDS open 489-1508 1020_na     339_aa hypothetical protein
6522 QVNA01000229.1 GCA_003417575.1_06522 CDS open 465-914 450_na     149_aa hypothetical protein
6523 QVNA01000229.1 GCA_003417575.1_06523 CDS open 1064-1504 441_na     146_aa lgrE Linear gramicidin dehydrogenase LgrE
6524 QVNA01000230.1 GCA_003417575.1_06524 CDS open 34-1083 1050_na     349_aa nicB_4 Nicotinate dehydrogenase subunit B
6525 QVNA01000231.1 GCA_003417575.1_06525 CDS open 13-201 189_na     62_aa hypothetical protein
6526 QVNA01000231.1 GCA_003417575.1_06526 CDS open 198-1040 843_na     280_aa madC Malonyl-S-ACP:biotin-protein carboxyltransferase MADC
6527 QVNA01000231.1 GCA_003417575.1_06527 CDS open 1033-1332 300_na     99_aa mdcC Malonate decarboxylase acyl carrier protein
6528 QVNA01000232.1 GCA_003417575.1_06528 CDS open 3-1271 1269_na     422_aa kdpD_2 Sensor protein KdpD
6529 QVNA01000233.1 GCA_003417575.1_06529 CDS open 70-585 516_na     171_aa hypothetical protein
6530 QVNA01000233.1 GCA_003417575.1_06530 CDS open 802-1317 516_na     171_aa hypothetical protein
6531 QVNA01000234.1 GCA_003417575.1_06531 CDS open 635-1072 438_na     145_aa hypothetical protein
6532 QVNA01000235.1 GCA_003417575.1_06532 CDS open 18-707 690_na     229_aa fan1 Fanconi-associated nuclease 1
6533 QVNA01000235.1 GCA_003417575.1_06533 CDS open 680-1156 477_na     158_aa hypothetical protein
6534 QVNA01000236.1 GCA_003417575.1_06534 CDS open 19-894 876_na     291_aa IS3 family transposase ISPsy29
6535 QVNA01000236.1 GCA_003417575.1_06535 CDS open 891-1169 279_na     92_aa hypothetical protein
6536 QVNA01000237.1 GCA_003417575.1_06536 CDS open 15-1190 1176_na     391_aa pgaA_2 Poly-beta-1%2C6-N-acetyl-D-glucosamine export protein
6537 QVNA01000238.1 GCA_003417575.1_06537 CDS open 47-1153 1107_na     368_aa mdtK_2 Multidrug resistance protein MdtK
6538 QVNA01000240.1 GCA_003417575.1_06538 CDS open 27-221 195_na     64_aa putative ABC transporter ATP-binding protein
6539 QVNA01000244.1 GCA_003417575.1_06539 CDS open 29-736 708_na     235_aa hypothetical protein
6540 QVNA01000244.1 GCA_003417575.1_06540 CDS open 805-924 120_na     39_aa hypothetical protein
6541 QVNA01000245.1 GCA_003417575.1_06541 CDS open 22-744 723_na     240_aa hypothetical protein
6542 QVNA01000246.1 GCA_003417575.1_06542 CDS open 349-750 402_na     133_aa hypothetical protein
6543 QVNA01000249.1 GCA_003417575.1_06543 CDS open 208-570 363_na     120_aa Cyclic diguanosine monophosphate-binding protein
6544 QVNA01000251.1 GCA_003417575.1_06544 CDS open 476-718 243_na     80_aa hypothetical protein
6545 QVNA01000252.1 GCA_003417575.1_06545 CDS open 110-517 408_na     135_aa dauB NAD(P)H-dependent anabolic L-arginine dehydrogenase DauB
6546 QVNA01000252.1 GCA_003417575.1_06546 CDS open 538-720 183_na     60_aa dauA_3 FAD-dependent catabolic D-arginine dehydrogenase DauA
6547 QVNA01000253.1 GCA_003417575.1_06547 CDS open 365-616 252_na     83_aa hypothetical protein
6548 QVNA01000255.1 GCA_003417575.1_06548 CDS open 67-501 435_na     144_aa hmuU_3 Hemin transport system permease protein HmuU
6549 QVNA01000257.1 GCA_003417575.1_06549 CDS open 414-536 123_na     40_aa hypothetical protein
6550 QVNA01000258.1 GCA_003417575.1_06550 CDS open 116-295 180_na     59_aa Dodecin
6551 QVNA01000258.1 GCA_003417575.1_06551 CDS open 397-618 222_na     73_aa hypothetical protein
6552 QVNA01000259.1 GCA_003417575.1_06552 CDS open 108-242 135_na     44_aa hypothetical protein
6553 QVNA01000259.1 GCA_003417575.1_06553 CDS open 239-487 249_na     82_aa pglF_2 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
6554 QVNA01000259.1 GCA_003417575.1_06554 CDS open 445-684 240_na     79_aa hypothetical protein
6555 QVNA01000263.1 GCA_003417575.1_06555 CDS open 33-515 483_na     160_aa hypothetical protein
6556 QVNA01000266.1 GCA_003417575.1_06556 CDS open 119-406 288_na     95_aa hypothetical protein
6557 QVNA01000267.1 tRNA open 282-357 tRNA-Ala(tgc)
6558 QVNA01000268.1 tRNA open 23-98 tRNA-Ala(tgc)
6559 QVNA01000268.1 tRNA open 129-204 tRNA-Ile(gat)
6560 QVNA01000270.1 tRNA open 23-98 tRNA-Ala(tgc)
6561 QVNA01000270.1 tRNA open 130-206 tRNA-Ile(gat)
6562 QVNA01000273.1 GCA_003417575.1_06562 CDS open 94-234 141_na     46_aa ftsY_2 Signal recognition particle receptor FtsY
6563 QVNA01000279.1 tRNA open 3-70 tRNA-Ala(tgc)
6564 QVNA01000279.1 tRNA open 101-177 tRNA-Ile(gat)
6565 QVNA01000278.1 tRNA open 4-69 tRNA-Ala(tgc)
6566 QVNA01000278.1 tRNA open 101-176 tRNA-Ile(gat)