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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Fusobacterium necrophorum (GCA_003732505.1)

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PROKKA Annotations for GCA_003732505.1
Genome Selected: Fusobacterium necrophorum
ContigsBases CDSrRNA tmRNAtRNA
1 2135983 2010 17 1 51
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Annotation Table [page:5]    |    Number of Records Found: 2095 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CP018196.1 GCA_003732505.1_02001 CDS open 2060685-2061593 909_na     302_aa ISL3 family transposase ISFnu5
2002 CP018196.1 GCA_003732505.1_02002 CDS open 2061821-2063101 1281_na     426_aa secY Protein translocase subunit SecY
2003 CP018196.1 GCA_003732505.1_02003 CDS open 2063140-2063622 483_na     160_aa rplO 50S ribosomal protein L15
2004 CP018196.1 GCA_003732505.1_02004 CDS open 2063622-2063807 186_na     61_aa rpmD 50S ribosomal protein L30
2005 CP018196.1 GCA_003732505.1_02005 CDS open 2063822-2064325 504_na     167_aa rpsE 30S ribosomal protein S5
2006 CP018196.1 GCA_003732505.1_02006 CDS open 2064352-2064714 363_na     120_aa rplR 50S ribosomal protein L18
2007 CP018196.1 GCA_003732505.1_02007 CDS open 2064741-2065274 534_na     177_aa rplF 50S ribosomal protein L6
2008 CP018196.1 GCA_003732505.1_02008 CDS open 2065298-2065693 396_na     131_aa rpsH 30S ribosomal protein S8
2009 CP018196.1 GCA_003732505.1_02009 CDS open 2065722-2066009 288_na     95_aa rpsN2 Alternate 30S ribosomal protein S14
2010 CP018196.1 GCA_003732505.1_02010 CDS open 2066031-2066582 552_na     183_aa rplE 50S ribosomal protein L5
2011 CP018196.1 GCA_003732505.1_02011 CDS open 2066601-2066942 342_na     113_aa rplX 50S ribosomal protein L24
2012 CP018196.1 GCA_003732505.1_02012 CDS open 2066965-2067333 369_na     122_aa rplN 50S ribosomal protein L14
2013 CP018196.1 GCA_003732505.1_02013 CDS open 2067367-2067618 252_na     83_aa rpsQ 30S ribosomal protein S17
2014 CP018196.1 GCA_003732505.1_02014 CDS open 2067660-2067842 183_na     60_aa rpmC 50S ribosomal protein L29
2015 CP018196.1 GCA_003732505.1_02015 CDS open 2067842-2068267 426_na     141_aa rplP 50S ribosomal protein L16
2016 CP018196.1 GCA_003732505.1_02016 CDS open 2068270-2068926 657_na     218_aa rpsC 30S ribosomal protein S3
2017 CP018196.1 GCA_003732505.1_02017 CDS open 2068949-2069281 333_na     110_aa rplV 50S ribosomal protein L22
2018 CP018196.1 GCA_003732505.1_02018 CDS open 2069334-2069609 276_na     91_aa rpsS 30S ribosomal protein S19
2019 CP018196.1 GCA_003732505.1_02019 CDS open 2069633-2070463 831_na     276_aa rplB 50S ribosomal protein L2
2020 CP018196.1 GCA_003732505.1_02020 CDS open 2070507-2070794 288_na     95_aa rplW 50S ribosomal protein L23
2021 CP018196.1 GCA_003732505.1_02021 CDS open 2070796-2071428 633_na     210_aa rplD 50S ribosomal protein L4
2022 CP018196.1 GCA_003732505.1_02022 CDS open 2071457-2072083 627_na     208_aa rplC 50S ribosomal protein L3
2023 CP018196.1 GCA_003732505.1_02023 CDS open 2072231-2072542 312_na     103_aa rpsJ 30S ribosomal protein S10
2024 CP018196.1 GCA_003732505.1_02024 CDS open 2072768-2073127 360_na     119_aa hypothetical protein
2025 CP018196.1 GCA_003732505.1_02025 CDS open 2073354-2073737 384_na     127_aa dfx Desulfoferrodoxin
2026 CP018196.1 GCA_003732505.1_02026 CDS open 2073758-2074183 426_na     141_aa perR Transcriptional regulator PerR
2027 CP018196.1 GCA_003732505.1_02027 CDS open 2074281-2074733 453_na     150_aa hypothetical protein
2028 CP018196.1 GCA_003732505.1_02028 CDS open 2074753-2075481 729_na     242_aa truA tRNA pseudouridine synthase A
2029 CP018196.1 GCA_003732505.1_02029 CDS open 2075598-2075954 357_na     118_aa hypothetical protein
2030 CP018196.1 GCA_003732505.1_02030 CDS open 2075986-2076588 603_na     200_aa hypothetical protein
2031 CP018196.1 GCA_003732505.1_02031 CDS open 2076667-2076909 243_na     80_aa hypothetical protein
2032 CP018196.1 GCA_003732505.1_02032 CDS open 2076906-2077388 483_na     160_aa tadA tRNA-specific adenosine deaminase
2033 CP018196.1 GCA_003732505.1_02033 CDS open 2077444-2079081 1638_na     545_aa rpsA 30S ribosomal protein S1
2034 CP018196.1 GCA_003732505.1_02034 CDS open 2079074-2079949 876_na     291_aa ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
2035 CP018196.1 GCA_003732505.1_02035 CDS open 2079939-2080208 270_na     89_aa crh HPr-like protein Crh
2036 CP018196.1 GCA_003732505.1_02036 CDS open 2080365-2082470 2106_na     701_aa glnA Glutamine synthetase
2037 CP018196.1 GCA_003732505.1_02037 CDS open 2082664-2083578 915_na     304_aa glsA2 Glutaminase 2
2038 CP018196.1 GCA_003732505.1_02038 CDS open 2083739-2084137 399_na     132_aa rpsI 30S ribosomal protein S9
2039 CP018196.1 GCA_003732505.1_02039 CDS open 2084154-2084588 435_na     144_aa rplM 50S ribosomal protein L13
2040 CP018196.1 GCA_003732505.1_02040 CDS open 2084780-2086213 1434_na     477_aa cstA Peptide transporter CstA
2041 CP018196.1 GCA_003732505.1_02041 CDS open 2086345-2087049 705_na     234_aa ypdB Transcriptional regulatory protein YpdB
2042 CP018196.1 GCA_003732505.1_02042 CDS open 2087046-2088719 1674_na     557_aa ypdA Sensor histidine kinase YpdA
2043 CP018196.1 GCA_003732505.1_02043 CDS open 2088729-2089628 900_na     299_aa impX Riboflavin transporter ImpX
2044 CP018196.1 GCA_003732505.1_02044 CDS open 2089749-2090132 384_na     127_aa hypothetical protein
2045 CP018196.1 tRNA open 2090293-2090369 tRNA-Arg(acg)
2046 CP018196.1 GCA_003732505.1_02046 CDS open 2090460-2091158 699_na     232_aa hypothetical protein
2047 CP018196.1 GCA_003732505.1_02047 CDS open 2091155-2092018 864_na     287_aa yddE putative isomerase YddE
2048 CP018196.1 GCA_003732505.1_02048 CDS open 2092032-2092676 645_na     214_aa lexA LexA repressor
2049 CP018196.1 GCA_003732505.1_02049 CDS open 2092852-2093076 225_na     74_aa hypothetical protein
2050 CP018196.1 GCA_003732505.1_02050 CDS open 2093200-2094399 1200_na     399_aa hypothetical protein
2051 CP018196.1 GCA_003732505.1_02051 CDS open 2094396-2095088 693_na     230_aa ureG Urease accessory protein UreG
2052 CP018196.1 GCA_003732505.1_02052 CDS open 2095089-2095913 825_na     274_aa btuD_3 Vitamin B12 import ATP-binding protein BtuD
2053 CP018196.1 GCA_003732505.1_02053 CDS open 2096563-2096826 264_na     87_aa yoeB Toxin YoeB
2054 CP018196.1 GCA_003732505.1_02054 CDS open 2096826-2097080 255_na     84_aa hypothetical protein
2055 CP018196.1 GCA_003732505.1_02055 CDS open 2097236-2098003 768_na     255_aa cntK Histidine racemase
2056 CP018196.1 GCA_003732505.1_02056 CDS open 2098082-2098918 837_na     278_aa kdsA 2-dehydro-3-deoxyphosphooctonate aldolase
2057 CP018196.1 GCA_003732505.1_02057 CDS open 2098923-2100374 1452_na     483_aa murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase
2058 CP018196.1 GCA_003732505.1_02058 CDS open 2100398-2101069 672_na     223_aa ung Uracil-DNA glycosylase
2059 CP018196.1 GCA_003732505.1_02059 CDS open 2101082-2102842 1761_na     586_aa hypothetical protein
2060 CP018196.1 GCA_003732505.1_02060 CDS open 2102864-2103286 423_na     140_aa hypothetical protein
2061 CP018196.1 rRNA open 2103378-2103480 5S ribosomal RNA
2062 CP018196.1 rRNA open 2103576-2106480 23S ribosomal RNA
2063 CP018196.1 rRNA open 2106627-2108130 16S ribosomal RNA
2064 CP018196.1 GCA_003732505.1_02064 CDS open 2108296-2108745 450_na     149_aa msrC Free methionine-R-sulfoxide reductase
2065 CP018196.1 GCA_003732505.1_02065 CDS open 2108792-2109373 582_na     193_aa hypothetical protein
2066 CP018196.1 GCA_003732505.1_02066 CDS open 2109428-2110687 1260_na     419_aa sctC Type 3 secretion system secretin
2067 CP018196.1 GCA_003732505.1_02067 CDS open 2110656-2111249 594_na     197_aa hypothetical protein
2068 CP018196.1 GCA_003732505.1_02068 CDS open 2111227-2112366 1140_na     379_aa hypothetical protein
2069 CP018196.1 GCA_003732505.1_02069 CDS open 2112363-2112839 477_na     158_aa hypothetical protein
2070 CP018196.1 GCA_003732505.1_02070 CDS open 2112853-2113419 567_na     188_aa hypothetical protein
2071 CP018196.1 GCA_003732505.1_02071 CDS open 2113400-2113792 393_na     130_aa hypothetical protein
2072 CP018196.1 GCA_003732505.1_02072 CDS open 2113789-2114232 444_na     147_aa hypothetical protein
2073 CP018196.1 GCA_003732505.1_02073 CDS open 2114217-2114690 474_na     157_aa hypothetical protein
2074 CP018196.1 GCA_003732505.1_02074 CDS open 2114700-2115875 1176_na     391_aa gspF Putative type II secretion system protein F
2075 CP018196.1 GCA_003732505.1_02075 CDS open 2115872-2117344 1473_na     490_aa hypothetical protein
2076 CP018196.1 GCA_003732505.1_02076 CDS open 2117347-2117505 159_na     52_aa hypothetical protein
2077 CP018196.1 GCA_003732505.1_02077 CDS open 2117502-2118122 621_na     206_aa hypothetical protein
2078 CP018196.1 rRNA open 2118515-2121419 23S ribosomal RNA
2079 CP018196.1 tRNA open 2121532-2121608 tRNA-Ala(tgc)
2080 CP018196.1 tRNA open 2121614-2121690 tRNA-Ile(gat)
2081 CP018196.1 rRNA open 2121728-2123231 16S ribosomal RNA
2082 CP018196.1 GCA_003732505.1_02082 CDS open 2123375-2124724 1350_na     449_aa pgi Glucose-6-phosphate isomerase
2083 CP018196.1 GCA_003732505.1_02083 CDS open 2124747-2125178 432_na     143_aa hypothetical protein
2084 CP018196.1 tRNA open 2125299-2125373 tRNA-Gln(ttg)
2085 CP018196.1 GCA_003732505.1_02085 CDS open 2125463-2125750 288_na     95_aa spoVG Putative septation protein SpoVG
2086 CP018196.1 GCA_003732505.1_02086 CDS open 2125773-2126636 864_na     287_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2087 CP018196.1 GCA_003732505.1_02087 CDS open 2126623-2126928 306_na     101_aa hypothetical protein
2088 CP018196.1 GCA_003732505.1_02088 CDS open 2126997-2129948 2952_na     983_aa mfd Transcription-repair-coupling factor
2089 CP018196.1 GCA_003732505.1_02089 CDS open 2130003-2131850 1848_na     615_aa mnmG_2 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
2090 CP018196.1 GCA_003732505.1_02090 CDS open 2131860-2133233 1374_na     457_aa mnmE_2 tRNA modification GTPase MnmE
2091 CP018196.1 GCA_003732505.1_02091 CDS open 2133247-2133942 696_na     231_aa hypothetical protein
2092 CP018196.1 GCA_003732505.1_02092 CDS open 2133945-2134562 618_na     205_aa yidC2 Membrane protein insertase YidC 2
2093 CP018196.1 GCA_003732505.1_02093 CDS open 2134580-2134789 210_na     69_aa yidD Putative membrane protein insertion efficiency factor
2094 CP018196.1 GCA_003732505.1_02094 CDS open 2134798-2135130 333_na     110_aa rnpA Ribonuclease P protein component
2095 CP018196.1 GCA_003732505.1_02095 CDS open 2135195-2135329 135_na     44_aa rpmH 50S ribosomal protein L34