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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Streptococcus gordonii (GCA_003943255.1)

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PROKKA Annotations for GCA_003943255.1
Genome Selected: Streptococcus gordonii
ContigsBases CDSrRNA tmRNAtRNA
24 2182769 2083 4 1 49
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Annotation Table [page:5]    |    Number of Records Found: 2163 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 RJOZ01000012.1 GCA_003943255.1_02001 CDS open 17337-18005 669_na     222_aa 5-nucleotidase
2002 RJOZ01000012.1 misc_RNA open 18028-18121 csRNA
2003 RJOZ01000012.1 GCA_003943255.1_02003 CDS open 18403-18711 309_na     102_aa rpsJ 30S ribosomal protein S10
2004 RJOZ01000012.1 GCA_003943255.1_02004 CDS open 18902-19528 627_na     208_aa rplC 50S ribosomal protein L3
2005 RJOZ01000012.1 GCA_003943255.1_02005 CDS open 19553-20176 624_na     207_aa rplD 50S ribosomal protein L4
2006 RJOZ01000012.1 GCA_003943255.1_02006 CDS open 20176-20472 297_na     98_aa rplW 50S ribosomal protein L23
2007 RJOZ01000012.1 GCA_003943255.1_02007 CDS open 20490-21323 834_na     277_aa rplB 50S ribosomal protein L2
2008 RJOZ01000012.1 GCA_003943255.1_02008 CDS open 21410-21691 282_na     93_aa rpsS 30S ribosomal protein S19
2009 RJOZ01000012.1 GCA_003943255.1_02009 CDS open 21703-22047 345_na     114_aa rplV 50S ribosomal protein L22
2010 RJOZ01000012.1 GCA_003943255.1_02010 CDS open 22060-22713 654_na     217_aa rpsC 30S ribosomal protein S3
2011 RJOZ01000012.1 GCA_003943255.1_02011 CDS open 22717-23130 414_na     137_aa rplP 50S ribosomal protein L16
2012 RJOZ01000012.1 GCA_003943255.1_02012 CDS open 23140-23346 207_na     68_aa rpmC 50S ribosomal protein L29
2013 RJOZ01000012.1 GCA_003943255.1_02013 CDS open 23370-23630 261_na     86_aa rpsQ 30S ribosomal protein S17
2014 RJOZ01000012.1 GCA_003943255.1_02014 CDS open 23656-24024 369_na     122_aa rplN 50S ribosomal protein L14
2015 RJOZ01000012.1 GCA_003943255.1_02015 CDS open 24097-24402 306_na     101_aa rplX 50S ribosomal protein L24
2016 RJOZ01000012.1 GCA_003943255.1_02016 CDS open 24426-24968 543_na     180_aa rplE 50S ribosomal protein L5
2017 RJOZ01000012.1 GCA_003943255.1_02017 CDS open 24986-25171 186_na     61_aa rpsZ 30S ribosomal protein S14 type Z
2018 RJOZ01000012.1 GCA_003943255.1_02018 CDS open 25456-25854 399_na     132_aa rpsH 30S ribosomal protein S8
2019 RJOZ01000012.1 GCA_003943255.1_02019 CDS open 26043-26579 537_na     178_aa rplF 50S ribosomal protein L6
2020 RJOZ01000012.1 GCA_003943255.1_02020 CDS open 26662-27018 357_na     118_aa rplR 50S ribosomal protein L18
2021 RJOZ01000012.1 GCA_003943255.1_02021 CDS open 27037-27531 495_na     164_aa rpsE 30S ribosomal protein S5
2022 RJOZ01000012.1 GCA_003943255.1_02022 CDS open 27545-27727 183_na     60_aa rpmD 50S ribosomal protein L30
2023 RJOZ01000012.1 GCA_003943255.1_02023 CDS open 27883-28323 441_na     146_aa rplO 50S ribosomal protein L15
2024 RJOZ01000012.1 GCA_003943255.1_02024 CDS open 28336-29646 1311_na     436_aa secY_2 Protein translocase subunit SecY
2025 RJOZ01000012.1 GCA_003943255.1_02025 CDS open 29742-30380 639_na     212_aa adk Adenylate kinase
2026 RJOZ01000012.1 GCA_003943255.1_02026 CDS open 30498-30716 219_na     72_aa infA Translation initiation factor IF-1
2027 RJOZ01000012.1 GCA_003943255.1_02027 CDS open 30741-30857 117_na     38_aa rpmJ 50S ribosomal protein L36
2028 RJOZ01000012.1 GCA_003943255.1_02028 CDS open 30874-31239 366_na     121_aa rpsM 30S ribosomal protein S13
2029 RJOZ01000012.1 GCA_003943255.1_02029 CDS open 31259-31642 384_na     127_aa rpsK 30S ribosomal protein S11
2030 RJOZ01000012.1 GCA_003943255.1_02030 CDS open 31688-32626 939_na     312_aa rpoA DNA-directed RNA polymerase subunit alpha
2031 RJOZ01000012.1 GCA_003943255.1_02031 CDS open 32638-33024 387_na     128_aa rplQ 50S ribosomal protein L17
2032 RJOZ01000012.1 misc_RNA open 33041-33116 L17DE
2033 RJOZ01000012.1 GCA_003943255.1_02033 CDS open 33401-34681 1281_na     426_aa hypothetical protein
2034 RJOZ01000013.1 tRNA open 98-173 tRNA-Met(cat)
2035 RJOZ01000013.1 tRNA open 176-248 tRNA-Phe(gaa)
2036 RJOZ01000013.1 tRNA open 261-333 tRNA-Gly(tcc)
2037 RJOZ01000013.1 tRNA open 367-442 tRNA-Ile(gat)
2038 RJOZ01000013.1 tRNA open 451-541 tRNA-Ser(gct)
2039 RJOZ01000013.1 GCA_003943255.1_02039 CDS open 616-1431 816_na     271_aa mreC Cell shape-determining protein MreC
2040 RJOZ01000013.1 GCA_003943255.1_02040 CDS open 1433-1933 501_na     166_aa hypothetical protein
2041 RJOZ01000013.1 GCA_003943255.1_02041 CDS open 2033-3223 1191_na     396_aa hypothetical protein
2042 RJOZ01000013.1 GCA_003943255.1_02042 CDS open 3384-4349 966_na     321_aa prs Ribose-phosphate pyrophosphokinase
2043 RJOZ01000013.1 GCA_003943255.1_02043 CDS open 4566-5156 591_na     196_aa hypothetical protein
2044 RJOZ01000013.1 GCA_003943255.1_02044 CDS open 5244-6101 858_na     285_aa hypothetical protein
2045 RJOZ01000013.1 GCA_003943255.1_02045 CDS open 6180-6839 660_na     219_aa hypothetical protein
2046 RJOZ01000013.1 misc_RNA open 6853-6954 TPP
2047 RJOZ01000013.1 GCA_003943255.1_02047 CDS open 7179-7469 291_na     96_aa hypothetical protein
2048 RJOZ01000013.1 GCA_003943255.1_02048 CDS open 7432-8184 753_na     250_aa ribX Riboflavin transport system permease protein RibX
2049 RJOZ01000013.1 GCA_003943255.1_02049 CDS open 8228-9226 999_na     332_aa thiY Formylaminopyrimidine-binding protein
2050 RJOZ01000013.1 GCA_003943255.1_02050 CDS open 9226-9948 723_na     240_aa cysA Sulfatethiosulfate import ATP-binding protein CysA
2051 RJOZ01000013.1 GCA_003943255.1_02051 CDS open 10217-10828 612_na     203_aa rpsD 30S ribosomal protein S4
2052 RJOZ01000013.1 GCA_003943255.1_02052 CDS open 11282-13435 2154_na     717_aa lagD Lactococcin-G-processing and transport ATP-binding protein LagD
2053 RJOZ01000013.1 GCA_003943255.1_02053 CDS open 13445-14803 1359_na     452_aa lcnD Lactococcin A secretion protein LcnD
2054 RJOZ01000013.1 GCA_003943255.1_02054 CDS open 14911-16560 1650_na     549_aa hypothetical protein
2055 RJOZ01000013.1 GCA_003943255.1_02055 CDS open 16805-18064 1260_na     419_aa purD Phosphoribosylamine--glycine ligase
2056 RJOZ01000013.1 GCA_003943255.1_02056 CDS open 18124-19317 1194_na     397_aa hypothetical protein
2057 RJOZ01000013.1 GCA_003943255.1_02057 CDS open 19337-19825 489_na     162_aa purE N5-carboxyaminoimidazole ribonucleotide mutase
2058 RJOZ01000013.1 GCA_003943255.1_02058 CDS open 19812-20903 1092_na     363_aa purK N5-carboxyaminoimidazole ribonucleotide synthase
2059 RJOZ01000013.1 GCA_003943255.1_02059 CDS open 20905-21168 264_na     87_aa hypothetical protein
2060 RJOZ01000013.1 GCA_003943255.1_02060 CDS open 21188-21415 228_na     75_aa hypothetical protein
2061 RJOZ01000013.1 GCA_003943255.1_02061 CDS open 21547-22800 1254_na     417_aa hypothetical protein
2062 RJOZ01000013.1 GCA_003943255.1_02062 CDS open 22871-24166 1296_na     431_aa purB Adenylosuccinate lyase
2063 RJOZ01000013.1 GCA_003943255.1_02063 CDS open 24211-24777 567_na     188_aa azoR_2 FMN-dependent NADH-azoreductase
2064 RJOZ01000013.1 GCA_003943255.1_02064 CDS open 24774-25370 597_na     198_aa hypothetical protein
2065 RJOZ01000013.1 GCA_003943255.1_02065 CDS open 25621-26334 714_na     237_aa hypothetical protein
2066 RJOZ01000013.1 GCA_003943255.1_02066 CDS open 26350-27042 693_na     230_aa hypothetical protein
2067 RJOZ01000013.1 GCA_003943255.1_02067 CDS open 27607-28074 468_na     155_aa hypothetical protein
2068 RJOZ01000013.1 GCA_003943255.1_02068 CDS open 28333-28446 114_na     37_aa hypothetical protein
2069 RJOZ01000014.1 GCA_003943255.1_02069 CDS open 213-1430 1218_na     405_aa hypothetical protein
2070 RJOZ01000014.1 GCA_003943255.1_02070 CDS open 1427-2194 768_na     255_aa hypothetical protein
2071 RJOZ01000014.1 tRNA open 2255-2328 tRNA-Glu(ttc)
2072 RJOZ01000014.1 tRNA open 2333-2406 tRNA-Asn(gtt)
2073 RJOZ01000014.1 GCA_003943255.1_02073 CDS open 2516-3631 1116_na     371_aa ychF Ribosome-binding ATPase YchF
2074 RJOZ01000014.1 GCA_003943255.1_02074 CDS open 3705-4274 570_na     189_aa pth Peptidyl-tRNA hydrolase
2075 RJOZ01000014.1 GCA_003943255.1_02075 CDS open 4267-7770 3504_na     1167_aa mfd Transcription-repair-coupling factor
2076 RJOZ01000014.1 GCA_003943255.1_02076 CDS open 7836-8102 267_na     88_aa hypothetical protein
2077 RJOZ01000014.1 GCA_003943255.1_02077 CDS open 8095-8463 369_na     122_aa hypothetical protein
2078 RJOZ01000014.1 GCA_003943255.1_02078 CDS open 8585-9865 1281_na     426_aa hypothetical protein
2079 RJOZ01000014.1 GCA_003943255.1_02079 CDS open 9862-11139 1278_na     425_aa tilS tRNA(Ile)-lysidine synthase
2080 RJOZ01000014.1 GCA_003943255.1_02080 CDS open 11144-11686 543_na     180_aa hpt Hypoxanthine-guanine phosphoribosyltransferase
2081 RJOZ01000014.1 GCA_003943255.1_02081 CDS open 11705-13687 1983_na     660_aa ftsH ATP-dependent zinc metalloprotease FtsH
2082 RJOZ01000014.1 tRNA open 13863-13936 tRNA-Glu(ttc)
2083 RJOZ01000014.1 tRNA open 13941-14014 tRNA-Asn(gtt)
2084 RJOZ01000014.1 GCA_003943255.1_02084 CDS open 14216-14698 483_na     160_aa hypothetical protein
2085 RJOZ01000014.1 rRNA open 15083-16149 16S ribosomal RNA (partial)
2086 RJOZ01000014.1 tRNA open 16204-16278 tRNA-Ala(tgc)
2087 RJOZ01000014.1 rRNA open 16400-19295 23S ribosomal RNA
2088 RJOZ01000014.1 tRNA open 19397-19469 tRNA-Gly(tcc)
2089 RJOZ01000014.1 tRNA open 19503-19578 tRNA-Ile(gat)
2090 RJOZ01000014.1 tRNA open 19591-19664 tRNA-Glu(ttc)
2091 RJOZ01000014.1 tRNA open 19675-19764 tRNA-Ser(tga)
2092 RJOZ01000014.1 tRNA open 19783-19858 tRNA-Met(cat)
2093 RJOZ01000014.1 tRNA open 19861-19933 tRNA-Phe(gaa)
2094 RJOZ01000014.1 tRNA open 20000-20083 tRNA-Leu(caa)
2095 RJOZ01000014.1 GCA_003943255.1_02095 CDS open 20721-21164 444_na     147_aa adcR Transcriptional regulator AdcR
2096 RJOZ01000014.1 GCA_003943255.1_02096 CDS open 21161-21871 711_na     236_aa znuC High-affinity zinc uptake system ATP-binding protein ZnuC
2097 RJOZ01000014.1 GCA_003943255.1_02097 CDS open 21864-22670 807_na     268_aa znuB High-affinity zinc uptake system membrane protein ZnuB
2098 RJOZ01000014.1 GCA_003943255.1_02098 CDS open 22680-24182 1503_na     500_aa hypothetical protein
2099 RJOZ01000014.1 GCA_003943255.1_02099 CDS open 24331-24762 432_na     143_aa copY_2 Transcriptional repressor CopY
2100 RJOZ01000014.1 GCA_003943255.1_02100 CDS open 24773-27016 2244_na     747_aa actP Copper-transporting P-type ATPase
2101 RJOZ01000014.1 GCA_003943255.1_02101 CDS open 27037-27246 210_na     69_aa hypothetical protein
2102 RJOZ01000014.1 GCA_003943255.1_02102 CDS open 27383-27994 612_na     203_aa hypothetical protein
2103 RJOZ01000014.1 GCA_003943255.1_02103 CDS open 28090-28635 546_na     181_aa hypothetical protein
2104 RJOZ01000014.1 GCA_003943255.1_02104 CDS open 28661-29509 849_na     282_aa rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase
2105 RJOZ01000014.1 GCA_003943255.1_02105 CDS open 29597-30853 1257_na     418_aa tyrS Tyrosine--tRNA ligase
2106 RJOZ01000014.1 GCA_003943255.1_02106 CDS open 31031-33580 2550_na     849_aa mtgA_1 Biosynthetic peptidoglycan transglycosylase
2107 RJOZ01000014.1 misc_RNA open 33650-33705 Lacto-rpoB
2108 RJOZ01000014.1 GCA_003943255.1_02108 CDS open 34003-37569 3567_na     1188_aa rpoB DNA-directed RNA polymerase subunit beta
2109 RJOZ01000014.1 GCA_003943255.1_02109 CDS open 37610-41257 3648_na     1215_aa rpoC DNA-directed RNA polymerase subunit beta
2110 RJOZ01000014.1 GCA_003943255.1_02110 CDS open 41508-41876 369_na     122_aa hypothetical protein
2111 RJOZ01000014.1 GCA_003943255.1_02111 CDS open 41979-42917 939_na     312_aa comGA ComG operon protein 1
2112 RJOZ01000014.1 GCA_003943255.1_02112 CDS open 42862-43884 1023_na     340_aa gspF Putative type II secretion system protein F
2113 RJOZ01000014.1 GCA_003943255.1_02113 CDS open 43948-44076 129_na     42_aa hypothetical protein
2114 RJOZ01000015.1 GCA_003943255.1_02114 CDS open 31-1527 1497_na     498_aa hypothetical protein
2115 RJOZ01000015.1 GCA_003943255.1_02115 CDS open 1792-2763 972_na     323_aa hypothetical protein
2116 RJOZ01000015.1 GCA_003943255.1_02116 CDS open 2936-3808 873_na     290_aa rluC Ribosomal large subunit pseudouridine synthase C
2117 RJOZ01000015.1 GCA_003943255.1_02117 CDS open 3923-6181 2259_na     752_aa mtgA_2 Biosynthetic peptidoglycan transglycosylase
2118 RJOZ01000015.1 GCA_003943255.1_02118 CDS open 6306-7220 915_na     304_aa hypothetical protein
2119 RJOZ01000015.1 GCA_003943255.1_02119 CDS open 7533-7709 177_na     58_aa hypothetical protein
2120 RJOZ01000015.1 GCA_003943255.1_02120 CDS open 7893-8432 540_na     179_aa nusG Transcription terminationantitermination protein NusG
2121 RJOZ01000015.1 GCA_003943255.1_02121 CDS open 8812-9375 564_na     187_aa resA_4 Thiol-disulfide oxidoreductase ResA
2122 RJOZ01000015.1 GCA_003943255.1_02122 CDS open 9440-20383 10944_na     3647_aa hypothetical protein
2123 RJOZ01000016.1 GCA_003943255.1_02123 CDS open 488-829 342_na     113_aa nfi Endonuclease V
2124 RJOZ01000016.1 GCA_003943255.1_02124 CDS open 1132-1890 759_na     252_aa hypothetical protein
2125 RJOZ01000016.1 GCA_003943255.1_02125 CDS open 2145-2924 780_na     259_aa yxdL_2 ABC transporter ATP-binding protein YxdL
2126 RJOZ01000016.1 GCA_003943255.1_02126 CDS open 2905-4896 1992_na     663_aa bceB_2 Bacitracin export permease protein BceB
2127 RJOZ01000016.1 GCA_003943255.1_02127 CDS open 5047-5913 867_na     288_aa drrA Daunorubicindoxorubicin resistance ATP-binding protein DrrA
2128 RJOZ01000016.1 GCA_003943255.1_02128 CDS open 5915-6760 846_na     281_aa hypothetical protein
2129 RJOZ01000016.1 GCA_003943255.1_02129 CDS open 6783-7238 456_na     151_aa hypothetical protein
2130 RJOZ01000016.1 GCA_003943255.1_02130 CDS open 7249-7665 417_na     138_aa hypothetical protein
2131 RJOZ01000016.1 GCA_003943255.1_02131 CDS open 7783-8733 951_na     316_aa hypothetical protein
2132 RJOZ01000016.1 GCA_003943255.1_02132 CDS open 8882-9448 567_na     188_aa hypothetical protein
2133 RJOZ01000016.1 GCA_003943255.1_02133 CDS open 9680-10003 324_na     107_aa hypothetical protein
2134 RJOZ01000016.1 GCA_003943255.1_02134 CDS open 10013-10360 348_na     115_aa nrdI Protein NrdI
2135 RJOZ01000016.1 GCA_003943255.1_02135 CDS open 10766-11506 741_na     246_aa COQ5_3 2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase%2C mitochondrial
2136 RJOZ01000016.1 GCA_003943255.1_02136 CDS open 13915-14715 801_na     266_aa hypothetical protein
2137 RJOZ01000017.1 GCA_003943255.1_02137 CDS open 13-1341 1329_na     442_aa hypothetical protein
2138 RJOZ01000017.1 GCA_003943255.1_02138 CDS open 1354-2088 735_na     244_aa agrA Accessory gene regulator protein A
2139 RJOZ01000017.1 GCA_003943255.1_02139 CDS open 3745-4065 321_na     106_aa hypothetical protein
2140 RJOZ01000017.1 GCA_003943255.1_02140 CDS open 4099-4233 135_na     44_aa hypothetical protein
2141 RJOZ01000017.1 GCA_003943255.1_02141 CDS open 4277-4615 339_na     112_aa cadC Cadmium resistance transcriptional regulatory protein CadC
2142 RJOZ01000017.1 GCA_003943255.1_02142 CDS open 4627-5079 453_na     150_aa hypothetical protein
2143 RJOZ01000019.1 GCA_003943255.1_02143 CDS open 136-615 480_na     159_aa rlmH Ribosomal RNA large subunit methyltransferase H
2144 RJOZ01000019.1 tRNA open 657-732 tRNA-Arg(tct)
2145 RJOZ01000020.1 tRNA open 1-86 tRNA-Leu(taa)
2146 RJOZ01000020.1 tRNA open 92-163 tRNA-Gly(gcc)
2147 RJOZ01000020.1 tRNA open 184-256 tRNA-Thr(tgt)
2148 RJOZ01000020.1 tRNA open 267-348 tRNA-Leu(tag)
2149 RJOZ01000020.1 tRNA open 354-426 tRNA-Lys(ttt)
2150 RJOZ01000020.1 tRNA open 454-526 tRNA-Asp(gtc)
2151 RJOZ01000020.1 tRNA open 528-602 tRNA-Val(tac)
2152 RJOZ01000020.1 rRNA open 736-845 5S ribosomal RNA
2153 RJOZ01000021.1 tRNA open 1-86 tRNA-Leu(taa)
2154 RJOZ01000021.1 tRNA open 92-163 tRNA-Gly(gcc)
2155 RJOZ01000021.1 tRNA open 184-255 tRNA-Thr(tgt)
2156 RJOZ01000021.1 tRNA open 259-334 tRNA-Met(cat)
2157 RJOZ01000021.1 tRNA open 353-442 tRNA-Ser(tga)
2158 RJOZ01000021.1 tRNA open 458-533 tRNA-Met(cat)
2159 RJOZ01000021.1 tRNA open 545-620 tRNA-Met(cat)
2160 RJOZ01000021.1 tRNA open 626-699 tRNA-Pro(tgg)
2161 RJOZ01000021.1 tRNA open 728-801 tRNA-Arg(acg)
2162 RJOZ01000023.1 GCA_003943255.1_02162 CDS open 51-329 279_na     92_aa hypothetical protein
2163 RJOZ01000024.1 GCA_003943255.1_02163 CDS open 195-473 279_na     92_aa hypothetical protein