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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Streptococcus gordonii (GCA_003943355.1)

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PROKKA Annotations for GCA_003943355.1
Genome Selected: Streptococcus gordonii
ContigsBases CDSrRNA tmRNAtRNA
13 2194129 2090 6 1 47
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Annotation Table [page:5]    |    Number of Records Found: 2171 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 RJPG01000006.1 GCA_003943355.1_02001 CDS open 2345-3400 1056_na     351_aa wbbI Beta-1%2C6-galactofuranosyltransferase WbbI
2002 RJPG01000006.1 GCA_003943355.1_02002 CDS open 3428-4531 1104_na     367_aa glf UDP-galactopyranose mutase
2003 RJPG01000006.1 GCA_003943355.1_02003 CDS open 4541-5953 1413_na     470_aa rfbX Putative O-antigen transporter
2004 RJPG01000006.1 GCA_003943355.1_02004 CDS open 5950-7110 1161_na     386_aa hypothetical protein
2005 RJPG01000006.1 GCA_003943355.1_02005 CDS open 7149-8114 966_na     321_aa hypothetical protein
2006 RJPG01000006.1 GCA_003943355.1_02006 CDS open 8149-9147 999_na     332_aa hypothetical protein
2007 RJPG01000006.1 GCA_003943355.1_02007 CDS open 9150-10307 1158_na     385_aa mshA D-inositol-3-phosphate glycosyltransferase
2008 RJPG01000006.1 GCA_003943355.1_02008 CDS open 10311-11483 1173_na     390_aa hypothetical protein
2009 RJPG01000006.1 GCA_003943355.1_02009 CDS open 11521-12897 1377_na     458_aa hypothetical protein
2010 RJPG01000006.1 GCA_003943355.1_02010 CDS open 12917-13618 702_na     233_aa cpsD Tyrosine-protein kinase CpsD
2011 RJPG01000006.1 GCA_003943355.1_02011 CDS open 13631-14323 693_na     230_aa ywqC putative capsular polysaccharide biosynthesis protein YwqC
2012 RJPG01000006.1 GCA_003943355.1_02012 CDS open 14354-15085 732_na     243_aa cpsB Tyrosine-protein phosphatase CpsB
2013 RJPG01000006.1 GCA_003943355.1_02013 CDS open 15089-16549 1461_na     486_aa tagU_2 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU
2014 RJPG01000006.1 GCA_003943355.1_02014 CDS open 16845-17444 600_na     199_aa hypothetical protein
2015 RJPG01000006.1 GCA_003943355.1_02015 CDS open 17441-17959 519_na     172_aa hypothetical protein
2016 RJPG01000006.1 GCA_003943355.1_02016 CDS open 17969-18475 507_na     168_aa hypothetical protein
2017 RJPG01000006.1 GCA_003943355.1_02017 CDS open 18485-18988 504_na     167_aa hypothetical protein
2018 RJPG01000006.1 GCA_003943355.1_02018 CDS open 19003-19146 144_na     47_aa hypothetical protein
2019 RJPG01000006.1 GCA_003943355.1_02019 CDS open 19228-21432 2205_na     734_aa nrdD Anaerobic ribonucleoside-triphosphate reductase
2020 RJPG01000006.1 GCA_003943355.1_02020 CDS open 21542-23110 1569_na     522_aa hypothetical protein
2021 RJPG01000006.1 GCA_003943355.1_02021 CDS open 23200-23343 144_na     47_aa hypothetical protein
2022 RJPG01000006.1 GCA_003943355.1_02022 CDS open 23441-24967 1527_na     508_aa cls Cardiolipin synthase
2023 RJPG01000006.1 GCA_003943355.1_02023 CDS open 25091-25570 480_na     159_aa hypothetical protein
2024 RJPG01000006.1 GCA_003943355.1_02024 CDS open 25678-26916 1239_na     412_aa fpgS_2 Folylpolyglutamate synthase
2025 RJPG01000006.1 GCA_003943355.1_02025 CDS open 27167-27478 312_na     103_aa hypothetical protein
2026 RJPG01000006.1 GCA_003943355.1_02026 CDS open 27500-27919 420_na     139_aa yrrK Putative pre-16S rRNA nuclease
2027 RJPG01000006.1 GCA_003943355.1_02027 CDS open 27919-28185 267_na     88_aa hypothetical protein
2028 RJPG01000006.1 GCA_003943355.1_02028 CDS open 28297-28869 573_na     190_aa hypothetical protein
2029 RJPG01000006.1 GCA_003943355.1_02029 CDS open 29016-29414 399_na     132_aa spxA_2 Regulatory protein Spx
2030 RJPG01000006.1 GCA_003943355.1_02030 CDS open 29501-30652 1152_na     383_aa recA Protein RecA
2031 RJPG01000006.1 GCA_003943355.1_02031 CDS open 30710-31966 1257_na     418_aa cinA Putative competence-damage inducible protein
2032 RJPG01000006.1 GCA_003943355.1_02032 CDS open 32236-32646 411_na     136_aa bcrR HTH-type transcriptional activator BcrR
2033 RJPG01000006.1 GCA_003943355.1_02033 CDS open 32697-33392 696_na     231_aa hypothetical protein
2034 RJPG01000006.1 GCA_003943355.1_02034 CDS open 33361-33915 555_na     184_aa tag DNA-3-methyladenine glycosylase 1
2035 RJPG01000006.1 GCA_003943355.1_02035 CDS open 33925-34518 594_na     197_aa ruvA Holliday junction ATP-dependent DNA helicase RuvA
2036 RJPG01000006.1 GCA_003943355.1_02036 CDS open 34686-35189 504_na     167_aa hypothetical protein
2037 RJPG01000006.1 GCA_003943355.1_02037 CDS open 35173-35694 522_na     173_aa hypothetical protein
2038 RJPG01000006.1 GCA_003943355.1_02038 CDS open 35730-37673 1944_na     647_aa mutL DNA mismatch repair protein MutL
2039 RJPG01000006.1 GCA_003943355.1_02039 CDS open 37858-38298 441_na     146_aa putative HTH-type transcriptional regulator
2040 RJPG01000006.1 GCA_003943355.1_02040 CDS open 38295-38765 471_na     156_aa hypothetical protein
2041 RJPG01000006.1 GCA_003943355.1_02041 CDS open 38956-41499 2544_na     847_aa mutS_2 DNA mismatch repair protein MutS
2042 RJPG01000006.1 GCA_003943355.1_02042 CDS open 41678-42115 438_na     145_aa argR_3 Arginine repressor
2043 RJPG01000006.1 GCA_003943355.1_02043 CDS open 42244-43932 1689_na     562_aa argS Arginine--tRNA ligase
2044 RJPG01000006.1 GCA_003943355.1_02044 CDS open 44161-45096 936_na     311_aa hypothetical protein
2045 RJPG01000006.1 GCA_003943355.1_02045 CDS open 45083-46837 1755_na     584_aa aspS_2 Aspartate--tRNA ligase
2046 RJPG01000006.1 GCA_003943355.1_02046 CDS open 46968-47177 210_na     69_aa hypothetical protein
2047 RJPG01000006.1 GCA_003943355.1_02047 CDS open 47267-48547 1281_na     426_aa hisS Histidine--tRNA ligase
2048 RJPG01000006.1 GCA_003943355.1_02048 CDS open 48728-49069 342_na     113_aa hypothetical protein
2049 RJPG01000006.1 GCA_003943355.1_02049 CDS open 49135-50841 1707_na     568_aa ilvD Dihydroxy-acid dehydratase
2050 RJPG01000006.1 GCA_003943355.1_02050 CDS open 51083-51265 183_na     60_aa rpmF 50S ribosomal protein L32
2051 RJPG01000006.1 GCA_003943355.1_02051 CDS open 51281-51430 150_na     49_aa rpmGA 50S ribosomal protein L33 1
2052 RJPG01000006.1 GCA_003943355.1_02052 CDS open 52065-53582 1518_na     505_aa btuD_6 Vitamin B12 import ATP-binding protein BtuD
2053 RJPG01000006.1 GCA_003943355.1_02053 CDS open 54615-55307 693_na     230_aa hypothetical protein
2054 RJPG01000006.1 GCA_003943355.1_02054 CDS open 55323-56030 708_na     235_aa hypothetical protein
2055 RJPG01000006.1 GCA_003943355.1_02055 CDS open 56281-56877 597_na     198_aa hypothetical protein
2056 RJPG01000006.1 GCA_003943355.1_02056 CDS open 56874-57440 567_na     188_aa azoR FMN-dependent NADH-azoreductase
2057 RJPG01000006.1 GCA_003943355.1_02057 CDS open 57922-58533 612_na     203_aa hypothetical protein
2058 RJPG01000006.1 GCA_003943355.1_02058 CDS open 58533-59798 1266_na     421_aa hypothetical protein
2059 RJPG01000006.1 GCA_003943355.1_02059 CDS open 60131-60424 294_na     97_aa IS3 family transposase ISSth6
2060 RJPG01000006.1 GCA_003943355.1_02060 CDS open 60479-60667 189_na     62_aa hypothetical protein
2061 RJPG01000006.1 GCA_003943355.1_02061 CDS open 60643-61374 732_na     243_aa IS3 family transposase ISSpn4
2062 RJPG01000006.1 GCA_003943355.1_02062 CDS open 61532-62827 1296_na     431_aa purB Adenylosuccinate lyase
2063 RJPG01000006.1 GCA_003943355.1_02063 CDS open 62921-63481 561_na     186_aa hypothetical protein
2064 RJPG01000006.1 GCA_003943355.1_02064 CDS open 63727-64422 696_na     231_aa hypothetical protein
2065 RJPG01000006.1 GCA_003943355.1_02065 CDS open 64520-65212 693_na     230_aa ygeA L-aspartateglutamate-specific racemase
2066 RJPG01000006.1 GCA_003943355.1_02066 CDS open 65216-65443 228_na     75_aa hypothetical protein
2067 RJPG01000006.1 GCA_003943355.1_02067 CDS open 65464-65727 264_na     87_aa hypothetical protein
2068 RJPG01000006.1 GCA_003943355.1_02068 CDS open 65848-66927 1080_na     359_aa purK N5-carboxyaminoimidazole ribonucleotide synthase
2069 RJPG01000006.1 GCA_003943355.1_02069 CDS open 66914-67402 489_na     162_aa purE N5-carboxyaminoimidazole ribonucleotide mutase
2070 RJPG01000006.1 GCA_003943355.1_02070 CDS open 67422-68615 1194_na     397_aa hypothetical protein
2071 RJPG01000006.1 GCA_003943355.1_02071 CDS open 68675-69934 1260_na     419_aa purD Phosphoribosylamine--glycine ligase
2072 RJPG01000006.1 GCA_003943355.1_02072 CDS open 70179-71828 1650_na     549_aa hypothetical protein
2073 RJPG01000006.1 GCA_003943355.1_02073 CDS open 71936-73294 1359_na     452_aa lcnD Lactococcin A secretion protein LcnD
2074 RJPG01000006.1 GCA_003943355.1_02074 CDS open 73304-75457 2154_na     717_aa lagD Lactococcin-G-processing and transport ATP-binding protein LagD
2075 RJPG01000006.1 GCA_003943355.1_02075 CDS open 75869-76480 612_na     203_aa rpsD 30S ribosomal protein S4
2076 RJPG01000006.1 GCA_003943355.1_02076 CDS open 76746-77468 723_na     240_aa cysA Sulfatethiosulfate import ATP-binding protein CysA
2077 RJPG01000006.1 GCA_003943355.1_02077 CDS open 77468-78466 999_na     332_aa thiY Formylaminopyrimidine-binding protein
2078 RJPG01000006.1 GCA_003943355.1_02078 CDS open 78510-79262 753_na     250_aa ribX Riboflavin transport system permease protein RibX
2079 RJPG01000006.1 GCA_003943355.1_02079 CDS open 79225-79515 291_na     96_aa hypothetical protein
2080 RJPG01000006.1 misc_RNA open 79740-79841 TPP
2081 RJPG01000006.1 GCA_003943355.1_02081 CDS open 79855-80514 660_na     219_aa hypothetical protein
2082 RJPG01000006.1 GCA_003943355.1_02082 CDS open 80593-81450 858_na     285_aa hypothetical protein
2083 RJPG01000006.1 GCA_003943355.1_02083 CDS open 81539-82126 588_na     195_aa hypothetical protein
2084 RJPG01000006.1 GCA_003943355.1_02084 CDS open 82343-83308 966_na     321_aa prs Ribose-phosphate pyrophosphokinase
2085 RJPG01000006.1 GCA_003943355.1_02085 CDS open 83468-84658 1191_na     396_aa hypothetical protein
2086 RJPG01000006.1 GCA_003943355.1_02086 CDS open 84758-85258 501_na     166_aa hypothetical protein
2087 RJPG01000006.1 GCA_003943355.1_02087 CDS open 85260-86042 783_na     260_aa mreC Cell shape-determining protein MreC
2088 RJPG01000006.1 tRNA open 86141-86231 tRNA-Ser(gct)
2089 RJPG01000006.1 tRNA open 86240-86315 tRNA-Ile(gat)
2090 RJPG01000006.1 tRNA open 86349-86421 tRNA-Gly(tcc)
2091 RJPG01000006.1 tRNA open 86434-86506 tRNA-Phe(gaa)
2092 RJPG01000006.1 tRNA open 86509-86584 tRNA-Met(cat)
2093 RJPG01000006.1 tRNA open 86709-86782 tRNA-Arg(acg)
2094 RJPG01000006.1 tRNA open 86796-86881 tRNA-Leu(taa)
2095 RJPG01000006.1 tRNA open 86989-87061 tRNA-Asp(gtc)
2096 RJPG01000006.1 tRNA open 87065-87139 tRNA-Val(tac)
2097 RJPG01000007.1 GCA_003943355.1_02097 CDS open 58-1863 1806_na     601_aa hypothetical protein
2098 RJPG01000007.1 GCA_003943355.1_02098 CDS open 2115-3086 972_na     323_aa hypothetical protein
2099 RJPG01000007.1 GCA_003943355.1_02099 CDS open 3275-4138 864_na     287_aa rluC Ribosomal large subunit pseudouridine synthase C
2100 RJPG01000007.1 GCA_003943355.1_02100 CDS open 4253-6511 2259_na     752_aa mtgA_2 Biosynthetic peptidoglycan transglycosylase
2101 RJPG01000007.1 GCA_003943355.1_02101 CDS open 6636-7550 915_na     304_aa hypothetical protein
2102 RJPG01000007.1 GCA_003943355.1_02102 CDS open 7863-8039 177_na     58_aa hypothetical protein
2103 RJPG01000007.1 GCA_003943355.1_02103 CDS open 8223-8759 537_na     178_aa nusG Transcription terminationantitermination protein NusG
2104 RJPG01000007.1 GCA_003943355.1_02104 CDS open 9147-9710 564_na     187_aa resA_4 Thiol-disulfide oxidoreductase ResA
2105 RJPG01000007.1 GCA_003943355.1_02105 CDS open 9775-20712 10938_na     3645_aa hypothetical protein
2106 RJPG01000007.1 GCA_003943355.1_02106 CDS open 20789-23023 2235_na     744_aa hypothetical protein
2107 RJPG01000007.1 tRNA open 23246-23318 tRNA-Cys(gca)
2108 RJPG01000007.1 GCA_003943355.1_02108 CDS open 23602-24384 783_na     260_aa rpsB 30S ribosomal protein S2
2109 RJPG01000007.1 GCA_003943355.1_02109 CDS open 24463-25506 1044_na     347_aa tsf Elongation factor Ts
2110 RJPG01000007.1 GCA_003943355.1_02110 CDS open 25614-25964 351_na     116_aa hypothetical protein
2111 RJPG01000007.1 GCA_003943355.1_02111 CDS open 26283-26741 459_na     152_aa ctsR Transcriptional regulator CtsR
2112 RJPG01000007.1 GCA_003943355.1_02112 CDS open 26748-29177 2430_na     809_aa clpC_2 ATP-dependent Clp protease ATP-binding subunit ClpC
2113 RJPG01000007.1 GCA_003943355.1_02113 CDS open 29398-30456 1059_na     352_aa nadR Trifunctional NAD biosynthesisregulator protein NadR
2114 RJPG01000007.1 GCA_003943355.1_02114 CDS open 30478-31293 816_na     271_aa hypothetical protein
2115 RJPG01000007.1 GCA_003943355.1_02115 CDS open 31337-32125 789_na     262_aa hypothetical protein
2116 RJPG01000007.1 GCA_003943355.1_02116 CDS open 32361-33026 666_na     221_aa hypothetical protein
2117 RJPG01000007.1 GCA_003943355.1_02117 CDS open 33065-34042 978_na     325_aa dusB tRNA-dihydrouridine synthase B
2118 RJPG01000007.1 GCA_003943355.1_02118 CDS open 34029-34901 873_na     290_aa hslO 33 kDa chaperonin
2119 RJPG01000007.1 GCA_003943355.1_02119 CDS open 35090-37345 2256_na     751_aa gshAB Glutathione biosynthesis bifunctional protein GshAB
2120 RJPG01000007.1 GCA_003943355.1_02120 CDS open 37642-38934 1293_na     430_aa purA Adenylosuccinate synthetase
2121 RJPG01000007.1 GCA_003943355.1_02121 CDS open 38991-39659 669_na     222_aa 5-nucleotidase
2122 RJPG01000007.1 misc_RNA open 39682-39775 csRNA
2123 RJPG01000007.1 GCA_003943355.1_02123 CDS open 40057-40365 309_na     102_aa rpsJ 30S ribosomal protein S10
2124 RJPG01000007.1 GCA_003943355.1_02124 CDS open 40556-41182 627_na     208_aa rplC 50S ribosomal protein L3
2125 RJPG01000007.1 GCA_003943355.1_02125 CDS open 41207-41830 624_na     207_aa rplD 50S ribosomal protein L4
2126 RJPG01000007.1 GCA_003943355.1_02126 CDS open 41830-42126 297_na     98_aa rplW 50S ribosomal protein L23
2127 RJPG01000007.1 GCA_003943355.1_02127 CDS open 42144-42977 834_na     277_aa rplB 50S ribosomal protein L2
2128 RJPG01000007.1 GCA_003943355.1_02128 CDS open 43064-43345 282_na     93_aa rpsS 30S ribosomal protein S19
2129 RJPG01000007.1 GCA_003943355.1_02129 CDS open 43357-43701 345_na     114_aa rplV 50S ribosomal protein L22
2130 RJPG01000007.1 GCA_003943355.1_02130 CDS open 43714-44367 654_na     217_aa rpsC 30S ribosomal protein S3
2131 RJPG01000007.1 GCA_003943355.1_02131 CDS open 44371-44784 414_na     137_aa rplP 50S ribosomal protein L16
2132 RJPG01000007.1 GCA_003943355.1_02132 CDS open 44794-45000 207_na     68_aa rpmC 50S ribosomal protein L29
2133 RJPG01000007.1 GCA_003943355.1_02133 CDS open 45024-45284 261_na     86_aa rpsQ 30S ribosomal protein S17
2134 RJPG01000007.1 GCA_003943355.1_02134 CDS open 45310-45678 369_na     122_aa rplN 50S ribosomal protein L14
2135 RJPG01000007.1 GCA_003943355.1_02135 CDS open 45753-46058 306_na     101_aa rplX 50S ribosomal protein L24
2136 RJPG01000007.1 GCA_003943355.1_02136 CDS open 46082-46624 543_na     180_aa rplE 50S ribosomal protein L5
2137 RJPG01000007.1 GCA_003943355.1_02137 CDS open 46642-46827 186_na     61_aa rpsZ 30S ribosomal protein S14 type Z
2138 RJPG01000007.1 GCA_003943355.1_02138 CDS open 47113-47511 399_na     132_aa rpsH 30S ribosomal protein S8
2139 RJPG01000007.1 GCA_003943355.1_02139 CDS open 47775-48311 537_na     178_aa rplF 50S ribosomal protein L6
2140 RJPG01000007.1 GCA_003943355.1_02140 CDS open 48394-48750 357_na     118_aa rplR 50S ribosomal protein L18
2141 RJPG01000007.1 GCA_003943355.1_02141 CDS open 48769-49263 495_na     164_aa rpsE 30S ribosomal protein S5
2142 RJPG01000007.1 GCA_003943355.1_02142 CDS open 49277-49459 183_na     60_aa rpmD 50S ribosomal protein L30
2143 RJPG01000007.1 GCA_003943355.1_02143 CDS open 49615-50055 441_na     146_aa rplO 50S ribosomal protein L15
2144 RJPG01000007.1 GCA_003943355.1_02144 CDS open 50068-51378 1311_na     436_aa secY_2 Protein translocase subunit SecY
2145 RJPG01000007.1 GCA_003943355.1_02145 CDS open 51474-52112 639_na     212_aa adk Adenylate kinase
2146 RJPG01000007.1 GCA_003943355.1_02146 CDS open 52230-52448 219_na     72_aa infA Translation initiation factor IF-1
2147 RJPG01000007.1 GCA_003943355.1_02147 CDS open 52473-52589 117_na     38_aa rpmJ 50S ribosomal protein L36
2148 RJPG01000007.1 GCA_003943355.1_02148 CDS open 52606-52971 366_na     121_aa rpsM 30S ribosomal protein S13
2149 RJPG01000007.1 GCA_003943355.1_02149 CDS open 52991-53374 384_na     127_aa rpsK 30S ribosomal protein S11
2150 RJPG01000007.1 GCA_003943355.1_02150 CDS open 53420-54358 939_na     312_aa rpoA DNA-directed RNA polymerase subunit alpha
2151 RJPG01000007.1 GCA_003943355.1_02151 CDS open 54370-54756 387_na     128_aa rplQ 50S ribosomal protein L17
2152 RJPG01000007.1 misc_RNA open 54773-54848 L17DE
2153 RJPG01000007.1 GCA_003943355.1_02153 CDS open 55134-56414 1281_na     426_aa hypothetical protein
2154 RJPG01000008.1 rRNA open 5-114 5S ribosomal RNA
2155 RJPG01000008.1 rRNA open 200-3095 23S ribosomal RNA
2156 RJPG01000008.1 tRNA open 3216-3290 tRNA-Ala(tgc)
2157 RJPG01000008.1 rRNA open 3345-4897 16S ribosomal RNA
2158 RJPG01000009.1 GCA_003943355.1_02158 CDS open 380-1384 1005_na     334_aa hypothetical protein
2159 RJPG01000009.1 GCA_003943355.1_02159 CDS open 1453-2460 1008_na     335_aa hypothetical protein
2160 RJPG01000010.1 tRNA open 67-142 tRNA-Met(cat)
2161 RJPG01000010.1 tRNA open 161-250 tRNA-Ser(tga)
2162 RJPG01000010.1 tRNA open 261-334 tRNA-Glu(ttc)
2163 RJPG01000010.1 tRNA open 348-423 tRNA-Ile(gat)
2164 RJPG01000010.1 tRNA open 458-530 tRNA-Gly(tcc)
2165 RJPG01000010.1 tRNA open 536-610 tRNA-Val(tac)
2166 RJPG01000010.1 rRNA open 743-852 5S ribosomal RNA
2167 RJPG01000012.1 tRNA open 3-70 tRNA-Lys(ttt)
2168 RJPG01000012.1 tRNA open 98-170 tRNA-Asp(gtc)
2169 RJPG01000012.1 tRNA open 174-248 tRNA-Val(tac)
2170 RJPG01000012.1 rRNA open 380-489 5S ribosomal RNA
2171 RJPG01000013.1 GCA_003943355.1_02171 CDS open 21-164 144_na     47_aa hypothetical protein