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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Streptococcus gordonii (GCA_003944065.1)

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PROKKA Annotations for GCA_003944065.1
Genome Selected: Streptococcus gordonii
ContigsBases CDSrRNA tmRNAtRNA
22 2136640 2003 7 1 56
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Annotation Table [page:5]    |    Number of Records Found: 2127 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 RJOS01000007.1 GCA_003944065.1_02001 CDS open 41421-41936 516_na     171_aa dps DNA protection during starvation protein
2002 RJOS01000007.1 GCA_003944065.1_02002 CDS open 42105-42761 657_na     218_aa hypothetical protein
2003 RJOS01000007.1 GCA_003944065.1_02003 CDS open 42815-43507 693_na     230_aa hypothetical protein
2004 RJOS01000007.1 GCA_003944065.1_02004 CDS open 43544-44323 780_na     259_aa trpA Tryptophan synthase alpha chain
2005 RJOS01000007.1 GCA_003944065.1_02005 CDS open 44316-45539 1224_na     407_aa trpB_1 Tryptophan synthase beta chain
2006 RJOS01000007.1 GCA_003944065.1_02006 CDS open 45529-46116 588_na     195_aa trpF N-(5-phosphoribosyl)anthranilate isomerase
2007 RJOS01000007.1 GCA_003944065.1_02007 CDS open 46103-46870 768_na     255_aa trpC Indole-3-glycerol phosphate synthase
2008 RJOS01000007.1 GCA_003944065.1_02008 CDS open 46867-47871 1005_na     334_aa trpD Anthranilate phosphoribosyltransferase
2009 RJOS01000007.1 GCA_003944065.1_02009 CDS open 47882-48445 564_na     187_aa pabA Aminodeoxychorismateanthranilate synthase component 2
2010 RJOS01000007.1 GCA_003944065.1_02010 CDS open 48442-49800 1359_na     452_aa trpE Anthranilate synthase component 1
2011 RJOS01000007.1 GCA_003944065.1_02011 CDS open 50196-51377 1182_na     393_aa trpB_2 Tryptophan synthase beta chain
2012 RJOS01000007.1 misc_RNA open 51439-51673 T-box
2013 RJOS01000007.1 GCA_003944065.1_02013 CDS open 51744-52283 540_na     179_aa hypothetical protein
2014 RJOS01000007.1 GCA_003944065.1_02014 CDS open 52270-53358 1089_na     362_aa rlmN putative dual-specificity RNA methyltransferase RlmN
2015 RJOS01000007.1 GCA_003944065.1_02015 CDS open 53368-53904 537_na     178_aa hypothetical protein
2016 RJOS01000007.1 GCA_003944065.1_02016 CDS open 54076-55119 1044_na     347_aa ylbL putative protein YlbL
2017 RJOS01000007.1 GCA_003944065.1_02017 CDS open 55106-55600 495_na     164_aa coaD Phosphopantetheine adenylyltransferase
2018 RJOS01000007.1 GCA_003944065.1_02018 CDS open 55590-56129 540_na     179_aa rsmD Ribosomal RNA small subunit methyltransferase D
2019 RJOS01000007.1 GCA_003944065.1_02019 CDS open 56211-56699 489_na     162_aa hypothetical protein
2020 RJOS01000007.1 GCA_003944065.1_02020 CDS open 56842-57519 678_na     225_aa hypothetical protein
2021 RJOS01000007.1 GCA_003944065.1_02021 CDS open 57524-58939 1416_na     471_aa dinB_2 DNA polymerase IV
2022 RJOS01000007.1 GCA_003944065.1_02022 CDS open 58936-59310 375_na     124_aa hypothetical protein
2023 RJOS01000007.1 GCA_003944065.1_02023 CDS open 59288-59581 294_na     97_aa hypothetical protein
2024 RJOS01000007.1 GCA_003944065.1_02024 CDS open 59663-59947 285_na     94_aa hypothetical protein
2025 RJOS01000007.1 GCA_003944065.1_02025 CDS open 59940-60164 225_na     74_aa hypothetical protein
2026 RJOS01000007.1 GCA_003944065.1_02026 CDS open 60508-61605 1098_na     365_aa hypothetical protein
2027 RJOS01000007.1 GCA_003944065.1_02027 CDS open 61602-64247 2646_na     881_aa valS Valine--tRNA ligase
2028 RJOS01000007.1 GCA_003944065.1_02028 CDS open 64240-64818 579_na     192_aa hypothetical protein
2029 RJOS01000007.1 GCA_003944065.1_02029 CDS open 64818-65378 561_na     186_aa hypothetical protein
2030 RJOS01000007.1 GCA_003944065.1_02030 CDS open 65616-65870 255_na     84_aa hypothetical protein
2031 RJOS01000007.1 GCA_003944065.1_02031 CDS open 65897-67258 1362_na     453_aa hypothetical protein
2032 RJOS01000007.1 GCA_003944065.1_02032 CDS open 67261-67491 231_na     76_aa hypothetical protein
2033 RJOS01000007.1 GCA_003944065.1_02033 CDS open 67745-69172 1428_na     475_aa hypothetical protein
2034 RJOS01000007.1 GCA_003944065.1_02034 CDS open 69330-70838 1509_na     502_aa glpK Glycerol kinase
2035 RJOS01000007.1 GCA_003944065.1_02035 CDS open 70880-72706 1827_na     608_aa glpO Alpha-glycerophosphate oxidase
2036 RJOS01000007.1 GCA_003944065.1_02036 CDS open 72774-73478 705_na     234_aa glpF Glycerol uptake facilitator protein
2037 RJOS01000007.1 GCA_003944065.1_02037 CDS open 73652-75043 1392_na     463_aa rlmCD 23S rRNA (uracil-C(5))-methyltransferase RlmCD
2038 RJOS01000007.1 GCA_003944065.1_02038 CDS open 75099-75875 777_na     258_aa hypothetical protein
2039 RJOS01000007.1 GCA_003944065.1_02039 CDS open 75902-76678 777_na     258_aa recX Regulatory protein RecX
2040 RJOS01000007.1 GCA_003944065.1_02040 CDS open 76768-77301 534_na     177_aa hypothetical protein
2041 RJOS01000007.1 GCA_003944065.1_02041 CDS open 77417-77734 318_na     105_aa hypothetical protein
2042 RJOS01000007.1 tRNA open 77835-77908 tRNA-Pro(tgg)
2043 RJOS01000007.1 tRNA open 77937-78010 tRNA-Arg(acg)
2044 RJOS01000008.1 GCA_003944065.1_02044 CDS open 201-2702 2502_na     833_aa hypothetical protein
2045 RJOS01000008.1 GCA_003944065.1_02045 CDS open 2779-5499 2721_na     906_aa hypothetical protein
2046 RJOS01000008.1 tRNA open 5722-5794 tRNA-Cys(gca)
2047 RJOS01000008.1 GCA_003944065.1_02047 CDS open 6078-6860 783_na     260_aa rpsB 30S ribosomal protein S2
2048 RJOS01000008.1 GCA_003944065.1_02048 CDS open 6939-7982 1044_na     347_aa tsf Elongation factor Ts
2049 RJOS01000008.1 GCA_003944065.1_02049 CDS open 8090-8440 351_na     116_aa hypothetical protein
2050 RJOS01000008.1 GCA_003944065.1_02050 CDS open 8759-9217 459_na     152_aa ctsR Transcriptional regulator CtsR
2051 RJOS01000008.1 GCA_003944065.1_02051 CDS open 9224-11653 2430_na     809_aa clpC_2 ATP-dependent Clp protease ATP-binding subunit ClpC
2052 RJOS01000008.1 GCA_003944065.1_02052 CDS open 11873-12931 1059_na     352_aa nadR Trifunctional NAD biosynthesisregulator protein NadR
2053 RJOS01000008.1 GCA_003944065.1_02053 CDS open 12953-13768 816_na     271_aa hypothetical protein
2054 RJOS01000008.1 GCA_003944065.1_02054 CDS open 13812-14600 789_na     262_aa hypothetical protein
2055 RJOS01000008.1 GCA_003944065.1_02055 CDS open 14836-15510 675_na     224_aa hypothetical protein
2056 RJOS01000008.1 GCA_003944065.1_02056 CDS open 15550-16527 978_na     325_aa dusB tRNA-dihydrouridine synthase B
2057 RJOS01000008.1 GCA_003944065.1_02057 CDS open 16514-17386 873_na     290_aa hslO 33 kDa chaperonin
2058 RJOS01000008.1 GCA_003944065.1_02058 CDS open 17575-19830 2256_na     751_aa gshAB Glutathione biosynthesis bifunctional protein GshAB
2059 RJOS01000008.1 GCA_003944065.1_02059 CDS open 20127-21419 1293_na     430_aa purA Adenylosuccinate synthetase
2060 RJOS01000008.1 GCA_003944065.1_02060 CDS open 21476-22132 657_na     218_aa 5-nucleotidase
2061 RJOS01000008.1 misc_RNA open 22166-22259 csRNA
2062 RJOS01000008.1 GCA_003944065.1_02062 CDS open 22542-22850 309_na     102_aa rpsJ 30S ribosomal protein S10
2063 RJOS01000008.1 GCA_003944065.1_02063 CDS open 23065-23691 627_na     208_aa rplC 50S ribosomal protein L3
2064 RJOS01000008.1 GCA_003944065.1_02064 CDS open 23716-24339 624_na     207_aa rplD 50S ribosomal protein L4
2065 RJOS01000008.1 GCA_003944065.1_02065 CDS open 24339-24635 297_na     98_aa rplW 50S ribosomal protein L23
2066 RJOS01000008.1 GCA_003944065.1_02066 CDS open 24653-25486 834_na     277_aa rplB 50S ribosomal protein L2
2067 RJOS01000008.1 GCA_003944065.1_02067 CDS open 25573-25854 282_na     93_aa rpsS 30S ribosomal protein S19
2068 RJOS01000008.1 GCA_003944065.1_02068 CDS open 25866-26210 345_na     114_aa rplV 50S ribosomal protein L22
2069 RJOS01000008.1 GCA_003944065.1_02069 CDS open 26223-26876 654_na     217_aa rpsC 30S ribosomal protein S3
2070 RJOS01000008.1 GCA_003944065.1_02070 CDS open 26880-27293 414_na     137_aa rplP 50S ribosomal protein L16
2071 RJOS01000008.1 GCA_003944065.1_02071 CDS open 27303-27509 207_na     68_aa rpmC 50S ribosomal protein L29
2072 RJOS01000008.1 GCA_003944065.1_02072 CDS open 27533-27793 261_na     86_aa rpsQ 30S ribosomal protein S17
2073 RJOS01000008.1 GCA_003944065.1_02073 CDS open 27819-28187 369_na     122_aa rplN 50S ribosomal protein L14
2074 RJOS01000008.1 GCA_003944065.1_02074 CDS open 28261-28566 306_na     101_aa rplX 50S ribosomal protein L24
2075 RJOS01000008.1 GCA_003944065.1_02075 CDS open 28590-29132 543_na     180_aa rplE 50S ribosomal protein L5
2076 RJOS01000008.1 GCA_003944065.1_02076 CDS open 29150-29335 186_na     61_aa rpsZ 30S ribosomal protein S14 type Z
2077 RJOS01000008.1 GCA_003944065.1_02077 CDS open 29549-29947 399_na     132_aa rpsH 30S ribosomal protein S8
2078 RJOS01000008.1 GCA_003944065.1_02078 CDS open 30135-30671 537_na     178_aa rplF 50S ribosomal protein L6
2079 RJOS01000008.1 GCA_003944065.1_02079 CDS open 30754-31110 357_na     118_aa rplR 50S ribosomal protein L18
2080 RJOS01000008.1 GCA_003944065.1_02080 CDS open 31129-31623 495_na     164_aa rpsE 30S ribosomal protein S5
2081 RJOS01000008.1 GCA_003944065.1_02081 CDS open 31637-31819 183_na     60_aa rpmD 50S ribosomal protein L30
2082 RJOS01000008.1 GCA_003944065.1_02082 CDS open 31975-32415 441_na     146_aa rplO 50S ribosomal protein L15
2083 RJOS01000008.1 GCA_003944065.1_02083 CDS open 32428-33738 1311_na     436_aa secY_2 Protein translocase subunit SecY
2084 RJOS01000008.1 GCA_003944065.1_02084 CDS open 33834-34472 639_na     212_aa adk Adenylate kinase
2085 RJOS01000008.1 GCA_003944065.1_02085 CDS open 34590-34808 219_na     72_aa infA Translation initiation factor IF-1
2086 RJOS01000008.1 GCA_003944065.1_02086 CDS open 34833-34949 117_na     38_aa rpmJ 50S ribosomal protein L36
2087 RJOS01000008.1 GCA_003944065.1_02087 CDS open 34966-35331 366_na     121_aa rpsM 30S ribosomal protein S13
2088 RJOS01000008.1 GCA_003944065.1_02088 CDS open 35351-35734 384_na     127_aa rpsK 30S ribosomal protein S11
2089 RJOS01000008.1 GCA_003944065.1_02089 CDS open 35780-36718 939_na     312_aa rpoA DNA-directed RNA polymerase subunit alpha
2090 RJOS01000008.1 GCA_003944065.1_02090 CDS open 36730-37116 387_na     128_aa rplQ 50S ribosomal protein L17
2091 RJOS01000008.1 misc_RNA open 37133-37207 L17DE
2092 RJOS01000008.1 GCA_003944065.1_02092 CDS open 37493-38773 1281_na     426_aa hypothetical protein
2093 RJOS01000009.1 rRNA open 24-2918 23S ribosomal RNA
2094 RJOS01000009.1 tRNA open 3039-3113 tRNA-Ala(tgc)
2095 RJOS01000009.1 rRNA open 3168-4619 16S ribosomal RNA
2096 RJOS01000010.1 GCA_003944065.1_02096 CDS open 370-1074 705_na     234_aa hypothetical protein
2097 RJOS01000010.1 GCA_003944065.1_02097 CDS open 1078-1437 360_na     119_aa hypothetical protein
2098 RJOS01000010.1 GCA_003944065.1_02098 CDS open 1723-1920 198_na     65_aa IS200IS605 family transposase ISStin10
2099 RJOS01000010.1 GCA_003944065.1_02099 CDS open 2148-2462 315_na     104_aa hypothetical protein
2100 RJOS01000010.1 GCA_003944065.1_02100 CDS open 2462-3091 630_na     209_aa hypothetical protein
2101 RJOS01000010.1 GCA_003944065.1_02101 CDS open 3108-3968 861_na     286_aa hypothetical protein
2102 RJOS01000012.1 GCA_003944065.1_02102 CDS open 53-1354 1302_na     433_aa lcfB Long-chain-fatty-acid--CoA ligase
2103 RJOS01000013.1 tRNA open 65-140 tRNA-Met(cat)
2104 RJOS01000013.1 tRNA open 159-248 tRNA-Ser(tga)
2105 RJOS01000013.1 tRNA open 259-332 tRNA-Glu(ttc)
2106 RJOS01000013.1 tRNA open 345-420 tRNA-Ile(gat)
2107 RJOS01000013.1 tRNA open 454-526 tRNA-Gly(tcc)
2108 RJOS01000013.1 tRNA open 532-606 tRNA-Val(tac)
2109 RJOS01000013.1 rRNA open 642-751 5S ribosomal RNA
2110 RJOS01000015.1 tRNA open 7-80 tRNA-Pro(tgg)
2111 RJOS01000015.1 tRNA open 109-182 tRNA-Arg(acg)
2112 RJOS01000015.1 tRNA open 196-281 tRNA-Leu(taa)
2113 RJOS01000015.1 tRNA open 287-358 tRNA-Gly(gcc)
2114 RJOS01000015.1 tRNA open 379-451 tRNA-Thr(tgt)
2115 RJOS01000015.1 tRNA open 462-543 tRNA-Leu(tag)
2116 RJOS01000015.1 tRNA open 549-621 tRNA-Lys(ttt)
2117 RJOS01000015.1 tRNA open 649-721 tRNA-Asp(gtc)
2118 RJOS01000015.1 tRNA open 723-797 tRNA-Val(tac)
2119 RJOS01000016.1 rRNA open 338-447 5S ribosomal RNA
2120 RJOS01000016.1 tRNA open 483-557 tRNA-Val(tac)
2121 RJOS01000016.1 tRNA open 559-631 tRNA-Asp(gtc)
2122 RJOS01000016.1 tRNA open 659-730 tRNA-Lys(ttt)
2123 RJOS01000017.1 rRNA open 136-245 5S ribosomal RNA
2124 RJOS01000017.1 tRNA open 380-454 tRNA-Val(tac)
2125 RJOS01000017.1 tRNA open 456-528 tRNA-Asp(gtc)
2126 RJOS01000017.1 tRNA open 556-627 tRNA-Lys(ttt)
2127 RJOS01000018.1 rRNA open 154-609 16S ribosomal RNA (partial)