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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Afipia broomeae (GCA_003963205.1)

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PROKKA Annotations for GCA_003963205.1
Genome Selected: Afipia broomeae
ContigsBases CDSrRNA tmRNAtRNA
60 5173336 4960 1 1 50
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Annotation Table [page:11]    |    Number of Records Found: 5045 [11 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  11  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
5001 RXJE01000020.1 tRNA open 20541-20615 tRNA-Glu(ctc)
5002 RXJE01000020.1 GCA_003963205.1_05002 CDS open 20683-20976 294_na     97_aa hypothetical protein
5003 RXJE01000020.1 GCA_003963205.1_05003 CDS open 21246-22571 1326_na     441_aa hypothetical protein
5004 RXJE01000020.1 GCA_003963205.1_05004 CDS open 22868-24493 1626_na     541_aa gapN NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
5005 RXJE01000020.1 GCA_003963205.1_05005 CDS open 24681-25526 846_na     281_aa hypothetical protein
5006 RXJE01000020.1 GCA_003963205.1_05006 CDS open 25652-25879 228_na     75_aa hypothetical protein
5007 RXJE01000020.1 GCA_003963205.1_05007 CDS open 25965-27179 1215_na     404_aa emrD Multidrug resistance protein D
5008 RXJE01000020.1 GCA_003963205.1_05008 CDS open 27417-28322 906_na     301_aa htpX_2 Protease HtpX
5009 RXJE01000020.1 GCA_003963205.1_05009 CDS open 28396-28596 201_na     66_aa cspA_5 Cold shock protein CspA
5010 RXJE01000020.1 GCA_003963205.1_05010 CDS open 28755-30494 1740_na     579_aa hypothetical protein
5011 RXJE01000020.1 GCA_003963205.1_05011 CDS open 30663-32228 1566_na     521_aa hypothetical protein
5012 RXJE01000020.1 GCA_003963205.1_05012 CDS open 32286-32534 249_na     82_aa hypothetical protein
5013 RXJE01000020.1 GCA_003963205.1_05013 CDS open 32675-33718 1044_na     347_aa hypothetical protein
5014 RXJE01000020.1 GCA_003963205.1_05014 CDS open 33715-35184 1470_na     489_aa ycjX putative protein YcjX
5015 RXJE01000020.1 GCA_003963205.1_05015 CDS open 35388-36089 702_na     233_aa hypothetical protein
5016 RXJE01000020.1 GCA_003963205.1_05016 CDS open 36268-37065 798_na     265_aa 3-beta-hydroxycholanate 3-dehydrogenase (NAD(+)) 2
5017 RXJE01000020.1 GCA_003963205.1_05017 CDS open 37171-38022 852_na     283_aa meh Mesaconyl-C(4)-CoA hydratase
5018 RXJE01000020.1 GCA_003963205.1_05018 CDS open 38019-39143 1125_na     374_aa yfdE_3 Acetyl-CoA:oxalate CoA-transferase
5019 RXJE01000020.1 GCA_003963205.1_05019 CDS open 39378-40544 1167_na     388_aa mmgC_4 Acyl-CoA dehydrogenase
5020 RXJE01000020.1 GCA_003963205.1_05020 CDS open 40541-40978 438_na     145_aa hypothetical protein
5021 RXJE01000020.1 GCA_003963205.1_05021 CDS open 40996-42261 1266_na     421_aa linC_1 Linalool 8-monooxygenase
5022 RXJE01000020.1 GCA_003963205.1_05022 CDS open 42336-43607 1272_na     423_aa linC_2 Linalool 8-monooxygenase
5023 RXJE01000020.1 GCA_003963205.1_05023 CDS open 43839-45320 1482_na     493_aa bdlA Biofilm dispersion protein BdlA
5024 RXJE01000020.1 GCA_003963205.1_05024 CDS open 45534-46706 1173_na     390_aa mmgC_5 Acyl-CoA dehydrogenase
5025 RXJE01000020.1 GCA_003963205.1_05025 CDS open 46830-47642 813_na     270_aa hypothetical protein
5026 RXJE01000020.1 GCA_003963205.1_05026 CDS open 47786-48355 570_na     189_aa erfK putative L%2CD-transpeptidase ErfKSrfK
5027 RXJE01000020.1 GCA_003963205.1_05027 CDS open 48656-50200 1545_na     514_aa ilvX Putative acetolactate synthase large subunit IlvX
5028 RXJE01000020.1 GCA_003963205.1_05028 CDS open 50277-50495 219_na     72_aa hypothetical protein
5029 RXJE01000020.1 GCA_003963205.1_05029 CDS open 50649-50810 162_na     53_aa hypothetical protein
5030 RXJE01000020.1 GCA_003963205.1_05030 CDS open 50825-52525 1701_na     566_aa hypothetical protein
5031 RXJE01000020.1 tRNA open 52589-52663 tRNA-Val(cac)
5032 RXJE01000020.1 GCA_003963205.1_05032 CDS open 52785-54086 1302_na     433_aa smc_2 Chromosome partition protein Smc
5033 RXJE01000020.1 GCA_003963205.1_05033 CDS open 54233-54802 570_na     189_aa hypothetical protein
5034 RXJE01000020.1 GCA_003963205.1_05034 CDS open 54925-55422 498_na     165_aa hypothetical protein
5035 RXJE01000020.1 GCA_003963205.1_05035 CDS open 55416-56243 828_na     275_aa cysQ_2 3(2)%2C5-bisphosphate nucleotidase CysQ
5036 RXJE01000020.1 GCA_003963205.1_05036 CDS open 56398-57045 648_na     215_aa chpT Protein phosphotransferase ChpT
5037 RXJE01000020.1 GCA_003963205.1_05037 CDS open 57240-59948 2709_na     902_aa rcsC_13 Sensor histidine kinase RcsC
5038 RXJE01000020.1 GCA_003963205.1_05038 CDS open 59960-60430 471_na     156_aa cheW Chemotaxis protein CheW
5039 RXJE01000020.1 GCA_003963205.1_05039 CDS open 60503-60868 366_na     121_aa cheY_2 Chemotaxis protein CheY
5040 RXJE01000020.1 GCA_003963205.1_05040 CDS open 60963-62138 1176_na     391_aa cheB_2 Protein-glutamate methylesteraseprotein-glutamine glutaminase
5041 RXJE01000020.1 GCA_003963205.1_05041 CDS open 62135-63007 873_na     290_aa cheR1 Chemotaxis protein methyltransferase 1
5042 RXJE01000020.1 GCA_003963205.1_05042 CDS open 63057-63677 621_na     206_aa hypothetical protein
5043 RXJE01000020.1 GCA_003963205.1_05043 CDS open 63637-64464 828_na     275_aa hypothetical protein
5044 RXJE01000020.1 GCA_003963205.1_05044 CDS open 64534-65331 798_na     265_aa hypothetical protein
5045 RXJE01000020.1 GCA_003963205.1_05045 CDS open 65411-66058 648_na     215_aa ctrA Cell cycle response regulator CtrA