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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Veillonella sp. HMT-780 (GCA_003992235.1)

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PROKKA Annotations for GCA_003992235.1
Genome Selected: Veillonella sp. HMT-780
ContigsBases CDSrRNA tmRNAtRNA
15 1,770,519 1579 3 1 42
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Annotation Table [page:4]    |    Number of Records Found: 1645 [4 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
1501 RQVF01000006.1 GCA_003992235.1_01501 CDS open 101745-102698 954_na     317_aa rfbB dTDP-glucose 4%2C6-dehydratase
1502 RQVF01000006.1 GCA_003992235.1_01502 CDS open 102725-104680 1956_na     651_aa hypothetical protein
1503 RQVF01000006.1 GCA_003992235.1_01503 CDS open 104837-105709 873_na     290_aa cbiK_3 Sirohydrochlorin cobaltochelatase
1504 RQVF01000006.1 GCA_003992235.1_01504 CDS open 105899-106213 315_na     104_aa hypothetical protein
1505 RQVF01000006.1 GCA_003992235.1_01505 CDS open 106313-106903 591_na     196_aa bcrC Undecaprenyl-diphosphatase BcrC
1506 RQVF01000006.1 GCA_003992235.1_01506 CDS open 107078-108337 1260_na     419_aa hypothetical protein
1507 RQVF01000006.1 GCA_003992235.1_01507 CDS open 108623-109867 1245_na     414_aa hypothetical protein
1508 RQVF01000006.1 GCA_003992235.1_01508 CDS open 110153-111427 1275_na     424_aa hypothetical protein
1509 RQVF01000006.1 GCA_003992235.1_01509 CDS open 111826-113850 2025_na     674_aa btuD_4 Vitamin B12 import ATP-binding protein BtuD
1510 RQVF01000006.1 GCA_003992235.1_01510 CDS open 114039-114398 360_na     119_aa hypothetical protein
1511 RQVF01000006.1 GCA_003992235.1_01511 CDS open 114518-115636 1119_na     372_aa ugtP Processive diacylglycerol beta-glucosyltransferase
1512 RQVF01000006.1 GCA_003992235.1_01512 CDS open 115944-116255 312_na     103_aa hup DNA-binding protein HU
1513 RQVF01000006.1 GCA_003992235.1_01513 CDS open 116303-117094 792_na     263_aa mazG Nucleoside triphosphate pyrophosphohydrolasepyrophosphatase MazG
1514 RQVF01000006.1 GCA_003992235.1_01514 CDS open 117091-118635 1545_na     514_aa spoVB_2 Stage V sporulation protein B
1515 RQVF01000006.1 GCA_003992235.1_01515 CDS open 118637-121918 3282_na     1093_aa mfd Transcription-repair-coupling factor
1516 RQVF01000006.1 GCA_003992235.1_01516 CDS open 121974-122156 183_na     60_aa hypothetical protein
1517 RQVF01000006.1 tRNA open 122246-122329 tRNA-Leu(tag)
1518 RQVF01000006.1 tRNA open 122336-122412 tRNA-Arg(acg)
1519 RQVF01000006.1 tRNA open 122427-122502 tRNA-Trp(cca)
1520 RQVF01000007.1 tRNA open 131-206 tRNA-Lys(ttt)
1521 RQVF01000007.1 tRNA open 213-287 tRNA-Gln(ttg)
1522 RQVF01000007.1 tRNA open 294-369 tRNA-His(gtg)
1523 RQVF01000007.1 GCA_003992235.1_01523 CDS open 725-2047 1323_na     440_aa rclA putative pyridine nucleotide-disulfide oxidoreductase RclA
1524 RQVF01000007.1 GCA_003992235.1_01524 CDS open 2381-3229 849_na     282_aa speE Polyamine aminopropyltransferase
1525 RQVF01000007.1 GCA_003992235.1_01525 CDS open 3233-3877 645_na     214_aa hypothetical protein
1526 RQVF01000007.1 GCA_003992235.1_01526 CDS open 3877-4308 432_na     143_aa ppiB Peptidyl-prolyl cis-trans isomerase B
1527 RQVF01000007.1 GCA_003992235.1_01527 CDS open 4308-5009 702_na     233_aa tcdA tRNA threonylcarbamoyladenosine dehydratase
1528 RQVF01000007.1 GCA_003992235.1_01528 CDS open 5011-5385 375_na     124_aa hypothetical protein
1529 RQVF01000007.1 GCA_003992235.1_01529 CDS open 5449-8613 3165_na     1054_aa smc_2 Chromosome partition protein Smc
1530 RQVF01000007.1 GCA_003992235.1_01530 CDS open 8610-9854 1245_na     414_aa sbcD Nuclease SbcCD subunit D
1531 RQVF01000007.1 GCA_003992235.1_01531 CDS open 9857-10702 846_na     281_aa nfo putative endonuclease 4
1532 RQVF01000007.1 GCA_003992235.1_01532 CDS open 10837-11256 420_na     139_aa perR Transcriptional regulator PerR
1533 RQVF01000007.1 GCA_003992235.1_01533 CDS open 11390-12931 1542_na     513_aa cshA DEAD-box ATP-dependent RNA helicase CshA
1534 RQVF01000007.1 tRNA open 13110-13184 tRNA-Arg(ccg)
1535 RQVF01000007.1 GCA_003992235.1_01535 CDS open 13319-13783 465_na     154_aa yfkJ Low molecular weight protein-tyrosine-phosphatase YfkJ
1536 RQVF01000007.1 GCA_003992235.1_01536 CDS open 13851-16094 2244_na     747_aa hypothetical protein
1537 RQVF01000007.1 GCA_003992235.1_01537 CDS open 16417-16512 96_na     31_aa hypothetical protein
1538 RQVF01000007.1 GCA_003992235.1_01538 CDS open 16651-17658 1008_na     335_aa aroF Phospho-2-dehydro-3-deoxyheptonate aldolase
1539 RQVF01000007.1 GCA_003992235.1_01539 CDS open 17668-18723 1056_na     351_aa aroB 3-dehydroquinate synthase
1540 RQVF01000007.1 GCA_003992235.1_01540 CDS open 18861-20126 1266_na     421_aa aroA 3-phosphoshikimate 1-carboxyvinyltransferase
1541 RQVF01000007.1 GCA_003992235.1_01541 CDS open 20153-21277 1125_na     374_aa aroC Chorismate synthase
1542 RQVF01000007.1 GCA_003992235.1_01542 CDS open 21278-22513 1236_na     411_aa aroE Shikimate dehydrogenase (NADP(+))
1543 RQVF01000007.1 GCA_003992235.1_01543 CDS open 22892-24265 1374_na     457_aa cycA D-serineD-alanineglycine transporter
1544 RQVF01000007.1 GCA_003992235.1_01544 CDS open 25390-27279 1890_na     629_aa uvrC UvrABC system protein C
1545 RQVF01000007.1 GCA_003992235.1_01545 CDS open 27276-30140 2865_na     954_aa uvrA UvrABC system protein A
1546 RQVF01000007.1 GCA_003992235.1_01546 CDS open 30149-32257 2109_na     702_aa uvrB UvrABC system protein B
1547 RQVF01000007.1 GCA_003992235.1_01547 CDS open 32718-33116 399_na     132_aa hypothetical protein
1548 RQVF01000007.1 GCA_003992235.1_01548 CDS open 33123-34043 921_na     306_aa ftsY Signal recognition particle receptor FtsY
1549 RQVF01000007.1 GCA_003992235.1_01549 CDS open 34033-37596 3564_na     1187_aa smc_3 Chromosome partition protein Smc
1550 RQVF01000007.1 GCA_003992235.1_01550 CDS open 37759-38826 1068_na     355_aa hypothetical protein
1551 RQVF01000007.1 GCA_003992235.1_01551 CDS open 38884-39615 732_na     243_aa rnc Ribonuclease 3
1552 RQVF01000007.1 GCA_003992235.1_01552 CDS open 39618-40862 1245_na     414_aa fabF 3-oxoacyl-[acyl-carrier-protein] synthase 2
1553 RQVF01000007.1 GCA_003992235.1_01553 CDS open 40887-41843 957_na     318_aa hypothetical protein
1554 RQVF01000007.1 GCA_003992235.1_01554 CDS open 41914-42144 231_na     76_aa acpP Acyl carrier protein
1555 RQVF01000007.1 GCA_003992235.1_01555 CDS open 42189-42932 744_na     247_aa fabG 3-oxoacyl-[acyl-carrier-protein] reductase FabG
1556 RQVF01000007.1 GCA_003992235.1_01556 CDS open 42934-43872 939_na     312_aa fabD Malonyl CoA-acyl carrier protein transacylase
1557 RQVF01000007.1 GCA_003992235.1_01557 CDS open 43888-44832 945_na     314_aa NADH:quinone reductase
1558 RQVF01000007.1 GCA_003992235.1_01558 CDS open 44843-45838 996_na     331_aa fabHA 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1
1559 RQVF01000007.1 GCA_003992235.1_01559 CDS open 45822-46850 1029_na     342_aa plsX Phosphate acyltransferase
1560 RQVF01000007.1 GCA_003992235.1_01560 CDS open 46860-47414 555_na     184_aa fapR Transcription factor FapR
1561 RQVF01000007.1 GCA_003992235.1_01561 CDS open 47518-48666 1149_na     382_aa hypothetical protein
1562 RQVF01000007.1 GCA_003992235.1_01562 CDS open 48850-51111 2262_na     753_aa pfeA Ferric enterobactin receptor
1563 RQVF01000007.1 GCA_003992235.1_01563 CDS open 51255-51521 267_na     88_aa rpsO 30S ribosomal protein S15
1564 RQVF01000007.1 GCA_003992235.1_01564 CDS open 51645-52436 792_na     263_aa bceA Bacitracin export ATP-binding protein BceA
1565 RQVF01000007.1 GCA_003992235.1_01565 CDS open 52452-53351 900_na     299_aa hypothetical protein
1566 RQVF01000007.1 GCA_003992235.1_01566 CDS open 53387-54352 966_na     321_aa hypothetical protein
1567 RQVF01000007.1 GCA_003992235.1_01567 CDS open 54566-55906 1341_na     446_aa brnQ_2 Branched-chain amino acid transport system 2 carrier protein
1568 RQVF01000007.1 GCA_003992235.1_01568 CDS open 55919-57547 1629_na     542_aa pckA Phosphoenolpyruvate carboxykinase (ATP)
1569 RQVF01000007.1 GCA_003992235.1_01569 CDS open 57773-58660 888_na     295_aa gtaB UTP--glucose-1-phosphate uridylyltransferase
1570 RQVF01000007.1 GCA_003992235.1_01570 CDS open 58675-60234 1560_na     519_aa hypothetical protein
1571 RQVF01000007.1 GCA_003992235.1_01571 CDS open 60244-61350 1107_na     368_aa hypothetical protein
1572 RQVF01000007.1 GCA_003992235.1_01572 CDS open 61408-61854 447_na     148_aa hypothetical protein
1573 RQVF01000007.1 GCA_003992235.1_01573 CDS open 61957-62964 1008_na     335_aa hypE Carbamoyl dehydratase HypE
1574 RQVF01000007.1 GCA_003992235.1_01574 CDS open 62965-64083 1119_na     372_aa hypD Hydrogenase maturation factor HypD
1575 RQVF01000007.1 GCA_003992235.1_01575 CDS open 64040-64294 255_na     84_aa hybG Hydrogenase maturation factor HybG
1576 RQVF01000007.1 GCA_003992235.1_01576 CDS open 64303-66561 2259_na     752_aa hypF Carbamoyltransferase HypF
1577 RQVF01000007.1 GCA_003992235.1_01577 CDS open 66591-67985 1395_na     464_aa moaA_2 GTP 3%2C8-cyclase
1578 RQVF01000007.1 GCA_003992235.1_01578 CDS open 68301-68444 144_na     47_aa hypothetical protein
1579 RQVF01000007.1 GCA_003992235.1_01579 CDS open 68523-69545 1023_na     340_aa znuA High-affinity zinc uptake system binding-protein ZnuA
1580 RQVF01000007.1 GCA_003992235.1_01580 CDS open 69673-70272 600_na     199_aa hypothetical protein
1581 RQVF01000007.1 GCA_003992235.1_01581 CDS open 70487-70648 162_na     53_aa hypothetical protein
1582 RQVF01000007.1 GCA_003992235.1_01582 CDS open 70782-71381 600_na     199_aa hypothetical protein
1583 RQVF01000007.1 GCA_003992235.1_01583 CDS open 71595-72128 534_na     177_aa gmhB D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase
1584 RQVF01000007.1 GCA_003992235.1_01584 CDS open 72128-73093 966_na     321_aa hldD ADP-L-glycero-D-manno-heptose-6-epimerase
1585 RQVF01000007.1 GCA_003992235.1_01585 CDS open 73090-74574 1485_na     494_aa hldE Bifunctional protein HldE
1586 RQVF01000007.1 GCA_003992235.1_01586 CDS open 74567-75139 573_na     190_aa gmhA1 Phosphoheptose isomerase 1
1587 RQVF01000007.1 GCA_003992235.1_01587 CDS open 75132-75605 474_na     157_aa nrdR Transcriptional repressor NrdR
1588 RQVF01000007.1 GCA_003992235.1_01588 CDS open 75617-76534 918_na     305_aa hypothetical protein
1589 RQVF01000007.1 GCA_003992235.1_01589 CDS open 76688-77137 450_na     149_aa dut_2 Deoxyuridine 5-triphosphate nucleotidohydrolase
1590 RQVF01000007.1 GCA_003992235.1_01590 CDS open 77150-79219 2070_na     689_aa pnp Polyribonucleotide nucleotidyltransferase
1591 RQVF01000008.1 GCA_003992235.1_01591 CDS open 407-15910 15504_na     5167_aa hypothetical protein
1592 RQVF01000008.1 GCA_003992235.1_01592 CDS open 16587-21956 5370_na     1789_aa hypothetical protein
1593 RQVF01000008.1 GCA_003992235.1_01593 CDS open 22349-22831 483_na     160_aa hypothetical protein
1594 RQVF01000008.1 GCA_003992235.1_01594 CDS open 22988-23653 666_na     221_aa sdhB_2 L-serine dehydratase%2C beta chain
1595 RQVF01000008.1 GCA_003992235.1_01595 CDS open 23662-24537 876_na     291_aa sdhA_2 L-serine dehydratase%2C alpha chain
1596 RQVF01000008.1 GCA_003992235.1_01596 CDS open 24550-26004 1455_na     484_aa cca CCA-adding enzyme
1597 RQVF01000008.1 GCA_003992235.1_01597 CDS open 26001-27989 1989_na     662_aa spoVD Stage V sporulation protein D
1598 RQVF01000008.1 GCA_003992235.1_01598 CDS open 28067-28915 849_na     282_aa folD Bifunctional protein FolD protein
1599 RQVF01000008.1 GCA_003992235.1_01599 CDS open 28893-29234 342_na     113_aa hybF Hydrogenase maturation factor HybF
1600 RQVF01000008.1 GCA_003992235.1_01600 CDS open 29244-29909 666_na     221_aa hypB Hydrogenase maturation factor HypB
1601 RQVF01000008.1 GCA_003992235.1_01601 CDS open 29899-31614 1716_na     571_aa hypothetical protein
1602 RQVF01000008.1 tRNA open 32501-32576 tRNA-Thr(tgt)
1603 RQVF01000008.1 tRNA open 32584-32668 tRNA-Tyr(gta)
1604 RQVF01000008.1 tRNA open 32676-32751 tRNA-Met(cat)
1605 RQVF01000008.1 tRNA open 32778-32853 tRNA-Thr(ggt)
1606 RQVF01000008.1 tRNA open 32861-32937 tRNA-Met(cat)
1607 RQVF01000008.1 GCA_003992235.1_01607 CDS open 33093-33716 624_na     207_aa hypothetical protein
1608 RQVF01000009.1 GCA_003992235.1_01608 CDS open 360-2003 1644_na     547_aa hypothetical protein
1609 RQVF01000009.1 GCA_003992235.1_01609 CDS open 2118-2456 339_na     112_aa rplQ 50S ribosomal protein L17
1610 RQVF01000009.1 GCA_003992235.1_01610 CDS open 2471-3478 1008_na     335_aa rpoA DNA-directed RNA polymerase subunit alpha
1611 RQVF01000009.1 GCA_003992235.1_01611 CDS open 3530-3919 390_na     129_aa rpsK 30S ribosomal protein S11
1612 RQVF01000009.1 GCA_003992235.1_01612 CDS open 3935-4303 369_na     122_aa rpsM 30S ribosomal protein S13
1613 RQVF01000009.1 GCA_003992235.1_01613 CDS open 4326-4439 114_na     37_aa rpmJ 50S ribosomal protein L36
1614 RQVF01000009.1 GCA_003992235.1_01614 CDS open 4466-4684 219_na     72_aa infA Translation initiation factor IF-1
1615 RQVF01000009.1 GCA_003992235.1_01615 CDS open 4708-5478 771_na     256_aa map Methionine aminopeptidase 1
1616 RQVF01000009.1 GCA_003992235.1_01616 CDS open 5482-6045 564_na     187_aa adk Adenylate kinase
1617 RQVF01000009.1 GCA_003992235.1_01617 CDS open 6057-7319 1263_na     420_aa secY Protein translocase subunit SecY
1618 RQVF01000009.1 GCA_003992235.1_01618 CDS open 7321-7761 441_na     146_aa rplO 50S ribosomal protein L15
1619 RQVF01000009.1 GCA_003992235.1_01619 CDS open 7781-7960 180_na     59_aa rpmD 50S ribosomal protein L30
1620 RQVF01000009.1 GCA_003992235.1_01620 CDS open 7975-8475 501_na     166_aa rpsE 30S ribosomal protein S5
1621 RQVF01000009.1 GCA_003992235.1_01621 CDS open 8494-8856 363_na     120_aa rplR 50S ribosomal protein L18
1622 RQVF01000009.1 GCA_003992235.1_01622 CDS open 8888-9433 546_na     181_aa rplF 50S ribosomal protein L6
1623 RQVF01000009.1 GCA_003992235.1_01623 CDS open 9458-9856 399_na     132_aa rpsH 30S ribosomal protein S8
1624 RQVF01000009.1 GCA_003992235.1_01624 CDS open 9885-10154 270_na     89_aa rpsN2 Alternate 30S ribosomal protein S14
1625 RQVF01000009.1 GCA_003992235.1_01625 CDS open 10172-10711 540_na     179_aa rplE 50S ribosomal protein L5
1626 RQVF01000009.1 GCA_003992235.1_01626 CDS open 10739-11056 318_na     105_aa rplX 50S ribosomal protein L24
1627 RQVF01000009.1 GCA_003992235.1_01627 CDS open 11073-11441 369_na     122_aa rplN 50S ribosomal protein L14
1628 RQVF01000009.1 GCA_003992235.1_01628 CDS open 11466-11726 261_na     86_aa rpsQ 30S ribosomal protein S17
1629 RQVF01000009.1 GCA_003992235.1_01629 CDS open 11766-11966 201_na     66_aa rpmC 50S ribosomal protein L29
1630 RQVF01000009.1 GCA_003992235.1_01630 CDS open 11956-12393 438_na     145_aa rplP 50S ribosomal protein L16
1631 RQVF01000009.1 GCA_003992235.1_01631 CDS open 12393-13058 666_na     221_aa rpsC 30S ribosomal protein S3
1632 RQVF01000009.1 GCA_003992235.1_01632 CDS open 13077-13412 336_na     111_aa rplV 50S ribosomal protein L22
1633 RQVF01000009.1 GCA_003992235.1_01633 CDS open 13424-13705 282_na     93_aa rpsS 30S ribosomal protein S19
1634 RQVF01000009.1 GCA_003992235.1_01634 CDS open 13728-14558 831_na     276_aa rplB 50S ribosomal protein L2
1635 RQVF01000009.1 GCA_003992235.1_01635 CDS open 14582-14866 285_na     94_aa rplW 50S ribosomal protein L23
1636 RQVF01000009.1 GCA_003992235.1_01636 CDS open 14866-15489 624_na     207_aa rplD 50S ribosomal protein L4
1637 RQVF01000009.1 GCA_003992235.1_01637 CDS open 15515-16156 642_na     213_aa rplC 50S ribosomal protein L3
1638 RQVF01000009.1 GCA_003992235.1_01638 CDS open 16176-16487 312_na     103_aa rpsJ 30S ribosomal protein S10
1639 RQVF01000010.1 rRNA open 8-1336 16S ribosomal RNA
1640 RQVF01000011.1 rRNA open 140-3059 23S ribosomal RNA
1641 RQVF01000011.1 rRNA open 3130-3239 5S ribosomal RNA
1642 RQVF01000012.1 GCA_003992235.1_01642 CDS open 2-1045 1044_na     347_aa tufA Elongation factor Tu
1643 RQVF01000014.1 tRNA open 185-259 tRNA-Ile(gat)
1644 RQVF01000015.1 tRNA open 1-77 tRNA-Ile(gat)
1645 RQVF01000015.1 tRNA open 179-252 tRNA-Ala(tgc)