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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Helicobacter pylori (GCA_004295525.1)

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PROKKA Annotations for GCA_004295525.1
Genome Selected: Helicobacter pylori
ContigsBases CDSrRNA tmRNAtRNA
1 1680829 1609 4 1 36
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Annotation Table [page:4]    |    Number of Records Found: 1668 [4 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
1501 AP017632.1 GCA_004295525.1_01501 CDS open 1501844-1503484 1641_na     546_aa hbpA Heme-binding protein A
1502 AP017632.1 GCA_004295525.1_01502 CDS open 1503608-1503874 267_na     88_aa rpmA 50S ribosomal protein L27
1503 AP017632.1 GCA_004295525.1_01503 CDS open 1503888-1504202 315_na     104_aa rplU 50S ribosomal protein L21
1504 AP017632.1 GCA_004295525.1_01504 CDS open 1504444-1506930 2487_na     828_aa hypothetical protein
1505 AP017632.1 GCA_004295525.1_01505 CDS open 1507013-1507996 984_na     327_aa amiE Aliphatic amidase
1506 AP017632.1 GCA_004295525.1_01506 CDS open 1508224-1509903 1680_na     559_aa menF Isochorismate synthase MenF
1507 AP017632.1 GCA_004295525.1_01507 CDS open 1509904-1510776 873_na     290_aa hypothetical protein
1508 AP017632.1 GCA_004295525.1_01508 CDS open 1510789-1511079 291_na     96_aa hypothetical protein
1509 AP017632.1 GCA_004295525.1_01509 CDS open 1511084-1512301 1218_na     405_aa lysA Diaminopimelate decarboxylase
1510 AP017632.1 GCA_004295525.1_01510 CDS open 1512349-1521054 8706_na     2901_aa hypothetical protein
1511 AP017632.1 GCA_004295525.1_01511 CDS open 1521118-1521591 474_na     157_aa hypothetical protein
1512 AP017632.1 GCA_004295525.1_01512 CDS open 1521604-1522122 519_na     172_aa hypothetical protein
1513 AP017632.1 GCA_004295525.1_01513 CDS open 1522125-1523777 1653_na     550_aa ftsH_2 ATP-dependent zinc metalloprotease FtsH
1514 AP017632.1 GCA_004295525.1_01514 CDS open 1523764-1525020 1257_na     418_aa mtaB Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB
1515 AP017632.1 GCA_004295525.1_01515 CDS open 1525017-1526588 1572_na     523_aa hypothetical protein
1516 AP017632.1 GCA_004295525.1_01516 CDS open 1526579-1527610 1032_na     343_aa aroB 3-dehydroquinate synthase
1517 AP017632.1 GCA_004295525.1_01517 CDS open 1527615-1529051 1437_na     478_aa hypothetical protein
1518 AP017632.1 GCA_004295525.1_01518 CDS open 1529108-1530223 1116_na     371_aa tgt Queuine tRNA-ribosyltransferase
1519 AP017632.1 GCA_004295525.1_01519 CDS open 1530323-1531309 987_na     328_aa lpxL Lipid A biosynthesis lauroyltransferase
1520 AP017632.1 GCA_004295525.1_01520 CDS open 1531306-1532316 1011_na     336_aa rfaC Lipopolysaccharide heptosyltransferase 1
1521 AP017632.1 GCA_004295525.1_01521 CDS open 1532313-1533767 1455_na     484_aa ppx Exopolyphosphatase
1522 AP017632.1 GCA_004295525.1_01522 CDS open 1533777-1534031 255_na     84_aa fdx Ferredoxin
1523 AP017632.1 GCA_004295525.1_01523 CDS open 1534088-1534645 558_na     185_aa trpC_2 Indole-3-glycerol phosphate synthase
1524 AP017632.1 GCA_004295525.1_01524 CDS open 1534633-1535925 1293_na     430_aa hypothetical protein
1525 AP017632.1 GCA_004295525.1_01525 CDS open 1535962-1536360 399_na     132_aa hypothetical protein
1526 AP017632.1 GCA_004295525.1_01526 CDS open 1536376-1536915 540_na     179_aa hypothetical protein
1527 AP017632.1 GCA_004295525.1_01527 CDS open 1536912-1537445 534_na     177_aa hypothetical protein
1528 AP017632.1 GCA_004295525.1_01528 CDS open 1537435-1538445 1011_na     336_aa hypothetical protein
1529 AP017632.1 GCA_004295525.1_01529 CDS open 1538408-1539070 663_na     220_aa hypothetical protein
1530 AP017632.1 GCA_004295525.1_01530 CDS open 1539101-1540414 1314_na     437_aa miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
1531 AP017632.1 GCA_004295525.1_01531 CDS open 1540424-1540666 243_na     80_aa hypothetical protein
1532 AP017632.1 GCA_004295525.1_01532 CDS open 1540727-1541953 1227_na     408_aa Adenosine deaminase
1533 AP017632.1 GCA_004295525.1_01533 CDS open 1541941-1543074 1134_na     377_aa pyrC_2 Dihydroorotase
1534 AP017632.1 GCA_004295525.1_01534 CDS open 1543084-1543803 720_na     239_aa dipZ Protein DipZ
1535 AP017632.1 GCA_004295525.1_01535 CDS open 1543860-1546430 2571_na     856_aa clpB Chaperone protein ClpB
1536 AP017632.1 GCA_004295525.1_01536 CDS open 1546503-1547261 759_na     252_aa dpnA_3 Modification methylase DpnIIB
1537 AP017632.1 GCA_004295525.1_01537 CDS open 1547351-1547653 303_na     100_aa hypothetical protein
1538 AP017632.1 GCA_004295525.1_01538 CDS open 1547598-1547954 357_na     118_aa hypothetical protein
1539 AP017632.1 GCA_004295525.1_01539 CDS open 1548139-1548294 156_na     51_aa hypothetical protein
1540 AP017632.1 GCA_004295525.1_01540 CDS open 1548269-1548754 486_na     161_aa hypothetical protein
1541 AP017632.1 GCA_004295525.1_01541 CDS open 1548747-1549919 1173_na     390_aa hypothetical protein
1542 AP017632.1 GCA_004295525.1_01542 CDS open 1549938-1551191 1254_na     417_aa xseA Exodeoxyribonuclease 7 large subunit
1543 AP017632.1 GCA_004295525.1_01543 CDS open 1551213-1552259 1047_na     348_aa mmpA Metalloprotease MmpA
1544 AP017632.1 GCA_004295525.1_01544 CDS open 1552259-1552918 660_na     219_aa hypothetical protein
1545 AP017632.1 GCA_004295525.1_01545 CDS open 1552911-1553339 429_na     142_aa hypothetical protein
1546 AP017632.1 GCA_004295525.1_01546 CDS open 1553336-1554571 1236_na     411_aa purA Adenylosuccinate synthetase
1547 AP017632.1 GCA_004295525.1_01547 CDS open 1554670-1556088 1419_na     472_aa hypothetical protein
1548 AP017632.1 GCA_004295525.1_01548 CDS open 1556101-1557558 1458_na     485_aa hypothetical protein
1549 AP017632.1 tRNA open 1557717-1557792 tRNA-Ala(ggc)
1550 AP017632.1 GCA_004295525.1_01550 CDS open 1557900-1558916 1017_na     338_aa yejE Inner membrane ABC transporter permease protein YejE
1551 AP017632.1 GCA_004295525.1_01551 CDS open 1558926-1560236 1311_na     436_aa yejF putative ABC transporter ATP-binding protein YejF
1552 AP017632.1 GCA_004295525.1_01552 CDS open 1560276-1560476 201_na     66_aa putative ABC transporter ATP-binding protein
1553 AP017632.1 GCA_004295525.1_01553 CDS open 1560550-1561089 540_na     179_aa hypothetical protein
1554 AP017632.1 GCA_004295525.1_01554 CDS open 1561096-1562184 1089_na     362_aa hypothetical protein
1555 AP017632.1 GCA_004295525.1_01555 CDS open 1562205-1563683 1479_na     492_aa rhpA DEAD-box ATP-dependent RNA helicase RhpA
1556 AP017632.1 GCA_004295525.1_01556 CDS open 1563872-1564900 1029_na     342_aa flgI Flagellar P-ring protein
1557 AP017632.1 GCA_004295525.1_01557 CDS open 1564897-1565214 318_na     105_aa hypothetical protein
1558 AP017632.1 GCA_004295525.1_01558 CDS open 1565211-1566356 1146_na     381_aa hypothetical protein
1559 AP017632.1 GCA_004295525.1_01559 CDS open 1566562-1566996 435_na     144_aa dps DNA protection during starvation protein
1560 AP017632.1 GCA_004295525.1_01560 CDS open 1567017-1567301 285_na     94_aa hypothetical protein
1561 AP017632.1 GCA_004295525.1_01561 CDS open 1567294-1567689 396_na     131_aa hypothetical protein
1562 AP017632.1 GCA_004295525.1_01562 CDS open 1567699-1568622 924_na     307_aa ispB Octaprenyl diphosphate synthase
1563 AP017632.1 GCA_004295525.1_01563 CDS open 1568622-1569971 1350_na     449_aa hemA Glutamyl-tRNA reductase
1564 AP017632.1 GCA_004295525.1_01564 CDS open 1569975-1571708 1734_na     577_aa proS Proline--tRNA ligase
1565 AP017632.1 GCA_004295525.1_01565 CDS open 1571719-1572639 921_na     306_aa hemC Porphobilinogen deaminase
1566 AP017632.1 GCA_004295525.1_01566 CDS open 1572639-1573010 372_na     123_aa hypothetical protein
1567 AP017632.1 GCA_004295525.1_01567 CDS open 1573103-1574164 1062_na     353_aa hypothetical protein
1568 AP017632.1 GCA_004295525.1_01568 CDS open 1574889-1575407 519_na     172_aa hypothetical protein
1569 AP017632.1 GCA_004295525.1_01569 CDS open 1575419-1576591 1173_na     390_aa ygiC Putative acid--amine ligase YgiC
1570 AP017632.1 GCA_004295525.1_01570 CDS open 1576613-1577260 648_na     215_aa hypothetical protein
1571 AP017632.1 GCA_004295525.1_01571 CDS open 1577276-1578073 798_na     265_aa hypothetical protein
1572 AP017632.1 GCA_004295525.1_01572 CDS open 1578186-1578917 732_na     243_aa kdsB 3-deoxy-manno-octulosonate cytidylyltransferase
1573 AP017632.1 GCA_004295525.1_01573 CDS open 1579112-1580560 1449_na     482_aa hypothetical protein
1574 AP017632.1 tRNA open 1580688-1580762 tRNA-Asn(gtt)
1575 AP017632.1 GCA_004295525.1_01575 CDS open 1580797-1581954 1158_na     385_aa dauA C4-dicarboxylic acid transporter DauA
1576 AP017632.1 GCA_004295525.1_01576 CDS open 1582131-1584290 2160_na     719_aa hypothetical protein
1577 AP017632.1 GCA_004295525.1_01577 CDS open 1584430-1585158 729_na     242_aa hypothetical protein
1578 AP017632.1 GCA_004295525.1_01578 CDS open 1585165-1586121 957_na     318_aa corA Magnesium transport protein CorA
1579 AP017632.1 GCA_004295525.1_01579 CDS open 1586137-1587345 1209_na     402_aa pgk Phosphoglycerate kinase
1580 AP017632.1 GCA_004295525.1_01580 CDS open 1587361-1588353 993_na     330_aa gapB Glyceraldehyde-3-phosphate dehydrogenase 2
1581 AP017632.1 GCA_004295525.1_01581 CDS open 1588442-1589143 702_na     233_aa ung Uracil-DNA glycosylase
1582 AP017632.1 GCA_004295525.1_01582 CDS open 1589140-1589856 717_na     238_aa hypothetical protein
1583 AP017632.1 GCA_004295525.1_01583 CDS open 1589843-1590958 1116_na     371_aa hypothetical protein
1584 AP017632.1 GCA_004295525.1_01584 CDS open 1591021-1592385 1365_na     454_aa hypothetical protein
1585 AP017632.1 GCA_004295525.1_01585 CDS open 1592780-1596094 3315_na     1104_aa hypothetical protein
1586 AP017632.1 GCA_004295525.1_01586 CDS open 1596119-1596940 822_na     273_aa nadC putative nicotinate-nucleotide pyrophosphorylase [carboxylating]
1587 AP017632.1 GCA_004295525.1_01587 CDS open 1596940-1597950 1011_na     336_aa nadA Quinolinate synthase A
1588 AP017632.1 GCA_004295525.1_01588 CDS open 1597940-1598743 804_na     267_aa psd Phosphatidylserine decarboxylase proenzyme
1589 AP017632.1 GCA_004295525.1_01589 CDS open 1598737-1599243 507_na     168_aa hypothetical protein
1590 AP017632.1 GCA_004295525.1_01590 CDS open 1599256-1599750 495_na     164_aa hypothetical protein
1591 AP017632.1 GCA_004295525.1_01591 CDS open 1599743-1600627 885_na     294_aa COQ2 4-hydroxybenzoate polyprenyltransferase%2C mitochondrial
1592 AP017632.1 GCA_004295525.1_01592 CDS open 1600656-1601969 1314_na     437_aa hypothetical protein
1593 AP017632.1 GCA_004295525.1_01593 CDS open 1601966-1603432 1467_na     488_aa dnaB Replicative DNA helicase
1594 AP017632.1 GCA_004295525.1_01594 CDS open 1603443-1604843 1401_na     466_aa nnr Bifunctional NAD(P)H-hydrate repair enzyme Nnr
1595 AP017632.1 GCA_004295525.1_01595 CDS open 1604846-1605979 1134_na     377_aa sasA Adaptive-response sensory-kinase SasA
1596 AP017632.1 GCA_004295525.1_01596 CDS open 1606014-1606655 642_na     213_aa qseB Transcriptional regulatory protein QseB
1597 AP017632.1 GCA_004295525.1_01597 CDS open 1606726-1606899 174_na     57_aa hypothetical protein
1598 AP017632.1 GCA_004295525.1_01598 CDS open 1606950-1609184 2235_na     744_aa hypothetical protein
1599 AP017632.1 GCA_004295525.1_01599 CDS open 1609195-1612107 2913_na     970_aa hypothetical protein
1600 AP017632.1 GCA_004295525.1_01600 CDS open 1612158-1612904 747_na     248_aa hypothetical protein
1601 AP017632.1 GCA_004295525.1_01601 CDS open 1612908-1613951 1044_na     347_aa mreB Cell shape-determining protein MreB
1602 AP017632.1 GCA_004295525.1_01602 CDS open 1613994-1615340 1347_na     448_aa clpX ATP-dependent Clp protease ATP-binding subunit ClpX
1603 AP017632.1 GCA_004295525.1_01603 CDS open 1615342-1616154 813_na     270_aa lpxA Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
1604 AP017632.1 GCA_004295525.1_01604 CDS open 1616157-1616636 480_na     159_aa fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
1605 AP017632.1 GCA_004295525.1_01605 CDS open 1616818-1617207 390_na     129_aa fliW2 Flagellar assembly factor FliW 2
1606 AP017632.1 GCA_004295525.1_01606 CDS open 1617424-1617561 138_na     45_aa hypothetical protein
1607 AP017632.1 GCA_004295525.1_01607 CDS open 1617622-1618284 663_na     220_aa bamD Outer membrane protein assembly factor BamD
1608 AP017632.1 GCA_004295525.1_01608 CDS open 1618326-1620803 2478_na     825_aa lon Lon protease
1609 AP017632.1 GCA_004295525.1_01609 CDS open 1620813-1621640 828_na     275_aa tyrC Cyclohexadienyl dehydrogenase
1610 AP017632.1 GCA_004295525.1_01610 CDS open 1621822-1622685 864_na     287_aa hypothetical protein
1611 AP017632.1 GCA_004295525.1_01611 CDS open 1622797-1624398 1602_na     533_aa hypothetical protein
1612 AP017632.1 GCA_004295525.1_01612 CDS open 1624364-1624516 153_na     50_aa hypothetical protein
1613 AP017632.1 GCA_004295525.1_01613 CDS open 1624510-1626852 2343_na     780_aa hypothetical protein
1614 AP017632.1 GCA_004295525.1_01614 CDS open 1627261-1628109 849_na     282_aa bioB Biotin synthase
1615 AP017632.1 GCA_004295525.1_01615 CDS open 1628109-1628987 879_na     292_aa hypothetical protein
1616 AP017632.1 rRNA open 1629954-1632836 23S ribosomal RNA
1617 AP017632.1 GCA_004295525.1_01617 CDS open 1633814-1634296 483_na     160_aa hypothetical protein
1618 AP017632.1 GCA_004295525.1_01618 CDS open 1634307-1636106 1800_na     599_aa hypothetical protein
1619 AP017632.1 GCA_004295525.1_01619 CDS open 1636256-1637152 897_na     298_aa hypothetical protein
1620 AP017632.1 GCA_004295525.1_01620 CDS open 1637265-1637711 447_na     148_aa queF NADPH-dependent 7-cyano-7-deazaguanine reductase
1621 AP017632.1 GCA_004295525.1_01621 CDS open 1637771-1638112 342_na     113_aa rsfS Ribosomal silencing factor RsfS
1622 AP017632.1 GCA_004295525.1_01622 CDS open 1638183-1639016 834_na     277_aa miaA tRNA dimethylallyltransferase
1623 AP017632.1 GCA_004295525.1_01623 CDS open 1639017-1640120 1104_na     367_aa hypothetical protein
1624 AP017632.1 GCA_004295525.1_01624 CDS open 1640130-1640933 804_na     267_aa hypothetical protein
1625 AP017632.1 GCA_004295525.1_01625 CDS open 1640944-1641795 852_na     283_aa cptA Phosphoethanolamine transferase CptA
1626 AP017632.1 GCA_004295525.1_01626 CDS open 1641855-1642634 780_na     259_aa murB UDP-N-acetylenolpyruvoylglucosamine reductase
1627 AP017632.1 GCA_004295525.1_01627 CDS open 1642638-1642904 267_na     88_aa hypothetical protein
1628 AP017632.1 GCA_004295525.1_01628 CDS open 1642915-1644219 1305_na     434_aa fliI Flagellum-specific ATP synthase
1629 AP017632.1 GCA_004295525.1_01629 CDS open 1644220-1645134 915_na     304_aa ptlH Type IV secretion system protein PtlH
1630 AP017632.1 GCA_004295525.1_01630 CDS open 1645151-1647913 2763_na     920_aa ileS Isoleucine--tRNA ligase
1631 AP017632.1 GCA_004295525.1_01631 CDS open 1647938-1648192 255_na     84_aa putative protein
1632 AP017632.1 GCA_004295525.1_01632 CDS open 1648294-1648914 621_na     206_aa hypothetical protein
1633 AP017632.1 GCA_004295525.1_01633 CDS open 1649045-1649572 528_na     175_aa hypothetical protein
1634 AP017632.1 GCA_004295525.1_01634 CDS open 1649821-1650078 258_na     85_aa hypothetical protein
1635 AP017632.1 GCA_004295525.1_01635 CDS open 1650284-1651357 1074_na     357_aa rlmN putative dual-specificity RNA methyltransferase RlmN
1636 AP017632.1 GCA_004295525.1_01636 CDS open 1651354-1652343 990_na     329_aa kdsD Arabinose 5-phosphate isomerase KdsD
1637 AP017632.1 GCA_004295525.1_01637 CDS open 1652327-1654405 2079_na     692_aa rnj Ribonuclease J
1638 AP017632.1 GCA_004295525.1_01638 CDS open 1654456-1655271 816_na     271_aa rsmA Ribosomal RNA small subunit methyltransferase A
1639 AP017632.1 GCA_004295525.1_01639 CDS open 1655521-1655748 228_na     75_aa hypothetical protein
1640 AP017632.1 GCA_004295525.1_01640 CDS open 1656552-1657046 495_na     164_aa hypothetical protein
1641 AP017632.1 misc_RNA open 1657125-1657228 HPnc0580
1642 AP017632.1 GCA_004295525.1_01642 CDS open 1657270-1657941 672_na     223_aa hypothetical protein
1643 AP017632.1 GCA_004295525.1_01643 CDS open 1657983-1658864 882_na     293_aa purU Formyltetrahydrofolate deformylase
1644 AP017632.1 GCA_004295525.1_01644 CDS open 1658867-1659745 879_na     292_aa hypothetical protein
1645 AP017632.1 GCA_004295525.1_01645 CDS open 1659817-1660089 273_na     90_aa hypothetical protein
1646 AP017632.1 GCA_004295525.1_01646 CDS open 1660332-1661060 729_na     242_aa hypothetical protein
1647 AP017632.1 GCA_004295525.1_01647 CDS open 1661112-1662218 1107_na     368_aa hypothetical protein
1648 AP017632.1 GCA_004295525.1_01648 CDS open 1662228-1662653 426_na     141_aa hypothetical protein
1649 AP017632.1 rRNA open 1663039-1664540 16S ribosomal RNA
1650 AP017632.1 GCA_004295525.1_01650 CDS open 1665040-1665762 723_na     240_aa hypothetical protein
1651 AP017632.1 GCA_004295525.1_01651 CDS open 1665943-1666431 489_na     162_aa ppiB Peptidyl-prolyl cis-trans isomerase B
1652 AP017632.1 GCA_004295525.1_01652 CDS open 1666449-1666679 231_na     76_aa csrA Translational regulator CsrA
1653 AP017632.1 GCA_004295525.1_01653 CDS open 1666679-1667500 822_na     273_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
1654 AP017632.1 GCA_004295525.1_01654 CDS open 1667478-1667936 459_na     152_aa smpB SsrA-binding protein
1655 AP017632.1 GCA_004295525.1_01655 CDS open 1667939-1668391 453_na     150_aa tolQ_2 Tol-Pal system protein TolQ
1656 AP017632.1 GCA_004295525.1_01656 CDS open 1668402-1668803 402_na     133_aa tolR Tol-Pal system protein TolR
1657 AP017632.1 GCA_004295525.1_01657 CDS open 1668969-1669454 486_na     161_aa rnpA Ribonuclease P protein component
1658 AP017632.1 GCA_004295525.1_01658 CDS open 1669800-1671446 1647_na     548_aa yidC Membrane protein insertase YidC
1659 AP017632.1 GCA_004295525.1_01659 CDS open 1671446-1672252 807_na     268_aa hypothetical protein
1660 AP017632.1 GCA_004295525.1_01660 CDS open 1672245-1673597 1353_na     450_aa mnmE tRNA modification GTPase MnmE
1661 AP017632.1 GCA_004295525.1_01661 CDS open 1673798-1676038 2241_na     746_aa hypothetical protein
1662 AP017632.1 GCA_004295525.1_01662 CDS open 1676073-1676354 282_na     93_aa hypothetical protein
1663 AP017632.1 GCA_004295525.1_01663 CDS open 1676543-1676812 270_na     89_aa hypothetical protein
1664 AP017632.1 GCA_004295525.1_01664 CDS open 1676898-1677344 447_na     148_aa hypothetical protein
1665 AP017632.1 GCA_004295525.1_01665 CDS open 1677411-1678037 627_na     208_aa thyX Flavin-dependent thymidylate synthase
1666 AP017632.1 GCA_004295525.1_01666 CDS open 1678059-1679852 1794_na     597_aa glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
1667 AP017632.1 GCA_004295525.1_01667 CDS open 1679853-1680092 240_na     79_aa putative protein
1668 AP017632.1 GCA_004295525.1_01668 CDS open 1680135-1680677 543_na     180_aa hypothetical protein