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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Peptidiphaga gingivicola (GCA_005886335.1)

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PROKKA Annotations for GCA_005886335.1
Genome Selected: Peptidiphaga gingivicola
ContigsBases CDSrRNA tmRNAtRNA
1 2526493 2094 9 1 48
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Annotation Table [page:5]    |    Number of Records Found: 2157 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CP040503.1 GCA_005886335.1_02001 CDS open 2360617-2361753 1137_na     378_aa prfB Peptide chain release factor 2
2002 CP040503.1 GCA_005886335.1_02002 CDS open 2361918-2362658 741_na     246_aa ftsE Cell division ATP-binding protein FtsE
2003 CP040503.1 GCA_005886335.1_02003 CDS open 2362655-2363569 915_na     304_aa ftsX Cell division protein FtsX
2004 CP040503.1 GCA_005886335.1_02004 CDS open 2363572-2364942 1371_na     456_aa hypothetical protein
2005 CP040503.1 GCA_005886335.1_02005 CDS open 2365299-2365826 528_na     175_aa smpB SsrA-binding protein
2006 CP040503.1 GCA_005886335.1_02006 CDS open 2365935-2366468 534_na     177_aa hypothetical protein
2007 CP040503.1 GCA_005886335.1_02007 CDS open 2366894-2368054 1161_na     386_aa hypothetical protein
2008 CP040503.1 GCA_005886335.1_02008 CDS open 2368379-2369065 687_na     228_aa hypothetical protein
2009 CP040503.1 GCA_005886335.1_02009 CDS open 2369735-2370973 1239_na     412_aa hypothetical protein
2010 CP040503.1 tmRNA open 2371190-2371558 ssrA transfer-messenger RNA%2C SsrA
2011 CP040503.1 GCA_005886335.1_02011 CDS open 2371928-2372533 606_na     201_aa hypothetical protein
2012 CP040503.1 GCA_005886335.1_02012 CDS open 2372715-2375834 3120_na     1039_aa hypothetical protein
2013 CP040503.1 GCA_005886335.1_02013 CDS open 2375818-2376501 684_na     227_aa hypothetical protein
2014 CP040503.1 GCA_005886335.1_02014 CDS open 2377174-2377455 282_na     93_aa hup DNA-binding protein HB1
2015 CP040503.1 GCA_005886335.1_02015 CDS open 2378155-2379837 1683_na     560_aa hypothetical protein
2016 CP040503.1 GCA_005886335.1_02016 CDS open 2379915-2380268 354_na     117_aa hypothetical protein
2017 CP040503.1 GCA_005886335.1_02017 CDS open 2380265-2382022 1758_na     585_aa hypothetical protein
2018 CP040503.1 GCA_005886335.1_02018 CDS open 2382195-2383547 1353_na     450_aa pncB1 Nicotinate phosphoribosyltransferase pncB1
2019 CP040503.1 GCA_005886335.1_02019 CDS open 2383671-2383961 291_na     96_aa clpS ATP-dependent Clp protease adapter protein ClpS
2020 CP040503.1 GCA_005886335.1_02020 CDS open 2383967-2384656 690_na     229_aa hypothetical protein
2021 CP040503.1 GCA_005886335.1_02021 CDS open 2384667-2385494 828_na     275_aa murI Glutamate racemase
2022 CP040503.1 GCA_005886335.1_02022 CDS open 2385491-2386285 795_na     264_aa putative protein
2023 CP040503.1 GCA_005886335.1_02023 CDS open 2386305-2387078 774_na     257_aa rph Ribonuclease PH
2024 CP040503.1 GCA_005886335.1_02024 CDS open 2387075-2387656 582_na     193_aa dITPXTP pyrophosphatase
2025 CP040503.1 GCA_005886335.1_02025 CDS open 2387653-2388183 531_na     176_aa hypothetical protein
2026 CP040503.1 GCA_005886335.1_02026 CDS open 2388300-2388773 474_na     157_aa bcp Putative peroxiredoxin
2027 CP040503.1 tRNA open 2388974-2389056 tRNA-Leu(tag)
2028 CP040503.1 GCA_005886335.1_02028 CDS open 2389091-2389450 360_na     119_aa hypothetical protein
2029 CP040503.1 GCA_005886335.1_02029 CDS open 2389590-2390447 858_na     285_aa aroE Shikimate dehydrogenase (NADP(+))
2030 CP040503.1 GCA_005886335.1_02030 CDS open 2390559-2392361 1803_na     600_aa Long-chain-fatty-acid--CoA ligase FadD15
2031 CP040503.1 GCA_005886335.1_02031 CDS open 2392490-2393245 756_na     251_aa hypothetical protein
2032 CP040503.1 GCA_005886335.1_02032 CDS open 2393447-2394763 1317_na     438_aa hypothetical protein
2033 CP040503.1 GCA_005886335.1_02033 CDS open 2394811-2395524 714_na     237_aa bceA_3 Bacitracin export ATP-binding protein BceA
2034 CP040503.1 GCA_005886335.1_02034 CDS open 2395688-2396794 1107_na     368_aa hypothetical protein
2035 CP040503.1 GCA_005886335.1_02035 CDS open 2396969-2397628 660_na     219_aa lnrK_2 Transcriptional regulatory protein LnrK
2036 CP040503.1 GCA_005886335.1_02036 CDS open 2397897-2399120 1224_na     407_aa arcA Arginine deiminase
2037 CP040503.1 GCA_005886335.1_02037 CDS open 2399407-2400534 1128_na     375_aa strB1 Inosamine-phosphate amidinotransferase 1
2038 CP040503.1 GCA_005886335.1_02038 CDS open 2400883-2402379 1497_na     498_aa proP Prolinebetaine transporter
2039 CP040503.1 GCA_005886335.1_02039 CDS open 2402523-2403125 603_na     200_aa hypothetical protein
2040 CP040503.1 GCA_005886335.1_02040 CDS open 2403347-2403784 438_na     145_aa hypothetical protein
2041 CP040503.1 GCA_005886335.1_02041 CDS open 2403882-2405480 1599_na     532_aa Multidrug efflux system permease protein
2042 CP040503.1 GCA_005886335.1_02042 CDS open 2405477-2406376 900_na     299_aa Multidrug efflux system ATP-binding protein
2043 CP040503.1 GCA_005886335.1_02043 CDS open 2406360-2407448 1089_na     362_aa hypothetical protein
2044 CP040503.1 GCA_005886335.1_02044 CDS open 2407728-2409230 1503_na     500_aa gltX_2 Glutamate--tRNA ligase
2045 CP040503.1 GCA_005886335.1_02045 CDS open 2409468-2411021 1554_na     517_aa hypothetical protein
2046 CP040503.1 tRNA open 2411234-2411306 tRNA-Gln(ctg)
2047 CP040503.1 tRNA open 2411340-2411413 tRNA-Glu(ctc)
2048 CP040503.1 tRNA open 2411452-2411525 tRNA-Glu(ctc)
2049 CP040503.1 GCA_005886335.1_02049 CDS open 2411628-2412419 792_na     263_aa hypothetical protein
2050 CP040503.1 GCA_005886335.1_02050 CDS open 2412570-2413463 894_na     297_aa hypothetical protein
2051 CP040503.1 GCA_005886335.1_02051 CDS open 2413474-2414634 1161_na     386_aa pimB GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase
2052 CP040503.1 GCA_005886335.1_02052 CDS open 2415468-2416259 792_na     263_aa hypothetical protein
2053 CP040503.1 GCA_005886335.1_02053 CDS open 2416773-2417558 786_na     261_aa hypothetical protein
2054 CP040503.1 GCA_005886335.1_02054 CDS open 2417665-2419062 1398_na     465_aa leuC 3-isopropylmalate dehydratase large subunit
2055 CP040503.1 GCA_005886335.1_02055 CDS open 2419141-2419797 657_na     218_aa leuD 3-isopropylmalate dehydratase small subunit
2056 CP040503.1 GCA_005886335.1_02056 CDS open 2419994-2421316 1323_na     440_aa murAA UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
2057 CP040503.1 GCA_005886335.1_02057 CDS open 2421316-2422242 927_na     308_aa hypothetical protein
2058 CP040503.1 GCA_005886335.1_02058 CDS open 2422220-2422903 684_na     227_aa hypothetical protein
2059 CP040503.1 GCA_005886335.1_02059 CDS open 2422900-2424051 1152_na     383_aa metB Cystathionine gamma-synthase
2060 CP040503.1 GCA_005886335.1_02060 CDS open 2424103-2425215 1113_na     370_aa ddlA D-alanine--D-alanine ligase A
2061 CP040503.1 GCA_005886335.1_02061 CDS open 2425449-2426072 624_na     207_aa 2-hydroxy-1%2C4-benzoquinone reductase
2062 CP040503.1 GCA_005886335.1_02062 CDS open 2426194-2426730 537_na     178_aa 2-hydroxy-1%2C4-benzoquinone reductase
2063 CP040503.1 GCA_005886335.1_02063 CDS open 2426756-2428261 1506_na     501_aa stp_3 Multidrug resistance protein Stp
2064 CP040503.1 GCA_005886335.1_02064 CDS open 2428383-2429033 651_na     216_aa hypothetical protein
2065 CP040503.1 GCA_005886335.1_02065 CDS open 2429030-2430157 1128_na     375_aa thiL Thiamine-monophosphate kinase
2066 CP040503.1 GCA_005886335.1_02066 CDS open 2430216-2431061 846_na     281_aa putative oxidoreductaseMSMEI_2347
2067 CP040503.1 GCA_005886335.1_02067 CDS open 2431134-2431331 198_na     65_aa rpmB 50S ribosomal protein L28
2068 CP040503.1 GCA_005886335.1_02068 CDS open 2431771-2433891 2121_na     706_aa recG ATP-dependent DNA helicase RecG
2069 CP040503.1 GCA_005886335.1_02069 CDS open 2434031-2434588 558_na     185_aa rsmD Ribosomal RNA small subunit methyltransferase D
2070 CP040503.1 GCA_005886335.1_02070 CDS open 2434585-2435073 489_na     162_aa coaD Phosphopantetheine adenylyltransferase
2071 CP040503.1 GCA_005886335.1_02071 CDS open 2435070-2435675 606_na     201_aa hypothetical protein
2072 CP040503.1 GCA_005886335.1_02072 CDS open 2435666-2436232 567_na     188_aa putative protein
2073 CP040503.1 GCA_005886335.1_02073 CDS open 2436229-2436915 687_na     228_aa rnc Ribonuclease 3
2074 CP040503.1 GCA_005886335.1_02074 CDS open 2436981-2437628 648_na     215_aa devR_2 DNA-binding transcriptional activator DevRDosR
2075 CP040503.1 GCA_005886335.1_02075 CDS open 2437739-2439382 1644_na     547_aa devS Oxygen sensor histidine kinase response regulator DevSDosS
2076 CP040503.1 GCA_005886335.1_02076 CDS open 2439379-2441226 1848_na     615_aa putative ABC transporter ATP-bindingpermease protein
2077 CP040503.1 GCA_005886335.1_02077 CDS open 2441223-2442974 1752_na     583_aa cydD ATP-bindingpermease protein CydD
2078 CP040503.1 GCA_005886335.1_02078 CDS open 2443053-2444177 1125_na     374_aa cydB Cytochrome bd-I ubiquinol oxidase subunit 2
2079 CP040503.1 GCA_005886335.1_02079 CDS open 2444189-2445652 1464_na     487_aa cydA Cytochrome bd-I ubiquinol oxidase subunit 1
2080 CP040503.1 GCA_005886335.1_02080 CDS open 2446066-2448888 2823_na     940_aa rne Ribonuclease E
2081 CP040503.1 GCA_005886335.1_02081 CDS open 2449144-2449446 303_na     100_aa rplU 50S ribosomal protein L21
2082 CP040503.1 GCA_005886335.1_02082 CDS open 2449486-2449743 258_na     85_aa rpmA 50S ribosomal protein L27
2083 CP040503.1 GCA_005886335.1_02083 CDS open 2449820-2451325 1506_na     501_aa obg GTPase Obg
2084 CP040503.1 GCA_005886335.1_02084 CDS open 2451567-2452484 918_na     305_aa hypothetical protein
2085 CP040503.1 GCA_005886335.1_02085 CDS open 2452598-2452957 360_na     119_aa trxC Putative thioredoxin 2
2086 CP040503.1 GCA_005886335.1_02086 CDS open 2453185-2453817 633_na     210_aa nadD putative nicotinate-nucleotide adenylyltransferase
2087 CP040503.1 GCA_005886335.1_02087 CDS open 2453967-2455337 1371_na     456_aa hypothetical protein
2088 CP040503.1 GCA_005886335.1_02088 CDS open 2455339-2455710 372_na     123_aa rsfS Ribosomal silencing factor RsfS
2089 CP040503.1 GCA_005886335.1_02089 CDS open 2455707-2456348 642_na     213_aa gpgP Glucosyl-3-phosphoglycerate phosphatase
2090 CP040503.1 tRNA open 2456448-2456523 tRNA-Ala(ggc)
2091 CP040503.1 GCA_005886335.1_02091 CDS open 2456861-2457676 816_na     271_aa hypothetical protein
2092 CP040503.1 GCA_005886335.1_02092 CDS open 2457673-2458776 1104_na     367_aa mhpC_2 2-hydroxy-6-oxononadienedioate2-hydroxy-6-oxononatrienedioate hydrolase
2093 CP040503.1 GCA_005886335.1_02093 CDS open 2458904-2460529 1626_na     541_aa putative Na(+)H(+) exchanger
2094 CP040503.1 GCA_005886335.1_02094 CDS open 2460703-2461056 354_na     117_aa hypothetical protein
2095 CP040503.1 GCA_005886335.1_02095 CDS open 2461153-2461662 510_na     169_aa ogt Methylated-DNA--protein-cysteine methyltransferase%2C constitutive
2096 CP040503.1 GCA_005886335.1_02096 CDS open 2461862-2464654 2793_na     930_aa hypothetical protein
2097 CP040503.1 GCA_005886335.1_02097 CDS open 2464696-2465538 843_na     280_aa metQ Methionine-binding lipoprotein MetQ
2098 CP040503.1 GCA_005886335.1_02098 CDS open 2465652-2466326 675_na     224_aa metP Methionine import system permease protein MetP
2099 CP040503.1 GCA_005886335.1_02099 CDS open 2466323-2467309 987_na     328_aa btuD_18 Vitamin B12 import ATP-binding protein BtuD
2100 CP040503.1 GCA_005886335.1_02100 CDS open 2467537-2467683 147_na     48_aa hypothetical protein
2101 CP040503.1 GCA_005886335.1_02101 CDS open 2467795-2468454 660_na     219_aa ideR_2 Iron-dependent repressor IdeR
2102 CP040503.1 GCA_005886335.1_02102 CDS open 2468454-2469161 708_na     235_aa deoD Purine nucleoside phosphorylase DeoD-type
2103 CP040503.1 GCA_005886335.1_02103 CDS open 2469394-2469906 513_na     170_aa hypothetical protein
2104 CP040503.1 GCA_005886335.1_02104 CDS open 2469919-2470734 816_na     271_aa hypothetical protein
2105 CP040503.1 GCA_005886335.1_02105 CDS open 2470787-2471470 684_na     227_aa hypothetical protein
2106 CP040503.1 GCA_005886335.1_02106 CDS open 2471487-2471939 453_na     150_aa putative HIT-like protein
2107 CP040503.1 GCA_005886335.1_02107 CDS open 2472173-2475100 2928_na     975_aa leuS Leucine--tRNA ligase
2108 CP040503.1 GCA_005886335.1_02108 CDS open 2475127-2476104 978_na     325_aa hypothetical protein
2109 CP040503.1 GCA_005886335.1_02109 CDS open 2476198-2478144 1947_na     648_aa hypothetical protein
2110 CP040503.1 GCA_005886335.1_02110 CDS open 2478446-2479588 1143_na     380_aa hypothetical protein
2111 CP040503.1 GCA_005886335.1_02111 CDS open 2479604-2481886 2283_na     760_aa hypothetical protein
2112 CP040503.1 GCA_005886335.1_02112 CDS open 2482061-2483041 981_na     326_aa hypothetical protein
2113 CP040503.1 GCA_005886335.1_02113 CDS open 2483072-2483209 138_na     45_aa hypothetical protein
2114 CP040503.1 GCA_005886335.1_02114 CDS open 2483200-2484729 1530_na     509_aa pntA NAD(P) transhydrogenase subunit alpha
2115 CP040503.1 GCA_005886335.1_02115 CDS open 2484732-2486234 1503_na     500_aa pntB NAD(P) transhydrogenase subunit beta
2116 CP040503.1 GCA_005886335.1_02116 CDS open 2486342-2487157 816_na     271_aa ycsE 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YcsE
2117 CP040503.1 GCA_005886335.1_02117 CDS open 2487186-2488103 918_na     305_aa sasA_4 Adaptive-response sensory-kinase SasA
2118 CP040503.1 GCA_005886335.1_02118 CDS open 2488100-2488822 723_na     240_aa phoP Alkaline phosphatase synthesis transcriptional regulatory protein PhoP
2119 CP040503.1 GCA_005886335.1_02119 CDS open 2488913-2489539 627_na     208_aa hypothetical protein
2120 CP040503.1 GCA_005886335.1_02120 CDS open 2489803-2490609 807_na     268_aa hypothetical protein
2121 CP040503.1 GCA_005886335.1_02121 CDS open 2491065-2491406 342_na     113_aa hypothetical protein
2122 CP040503.1 GCA_005886335.1_02122 CDS open 2491403-2492359 957_na     318_aa lnrL Linearmycin resistance ATP-binding protein LnrL
2123 CP040503.1 GCA_005886335.1_02123 CDS open 2492361-2493110 750_na     249_aa hypothetical protein
2124 CP040503.1 GCA_005886335.1_02124 CDS open 2493187-2493453 267_na     88_aa rpsT 30S ribosomal protein S20
2125 CP040503.1 GCA_005886335.1_02125 CDS open 2493610-2494362 753_na     250_aa hypothetical protein
2126 CP040503.1 GCA_005886335.1_02126 CDS open 2494362-2494919 558_na     185_aa hypothetical protein
2127 CP040503.1 GCA_005886335.1_02127 CDS open 2494966-2495829 864_na     287_aa hypothetical protein
2128 CP040503.1 GCA_005886335.1_02128 CDS open 2495915-2497756 1842_na     613_aa lepA Elongation factor 4
2129 CP040503.1 GCA_005886335.1_02129 CDS open 2497910-2498617 708_na     235_aa hypothetical protein
2130 CP040503.1 GCA_005886335.1_02130 CDS open 2498709-2499413 705_na     234_aa trmB tRNA (guanine-N(7)-)-methyltransferase
2131 CP040503.1 GCA_005886335.1_02131 CDS open 2499406-2500617 1212_na     403_aa hemW Heme chaperone HemW
2132 CP040503.1 GCA_005886335.1_02132 CDS open 2500677-2501774 1098_na     365_aa hypothetical protein
2133 CP040503.1 GCA_005886335.1_02133 CDS open 2501935-2502801 867_na     288_aa hypothetical protein
2134 CP040503.1 GCA_005886335.1_02134 CDS open 2502918-2503934 1017_na     338_aa hrcA Heat-inducible transcription repressor HrcA
2135 CP040503.1 GCA_005886335.1_02135 CDS open 2503949-2505064 1116_na     371_aa dnaJ Chaperone protein DnaJ
2136 CP040503.1 GCA_005886335.1_02136 CDS open 2505061-2505924 864_na     287_aa hypothetical protein
2137 CP040503.1 GCA_005886335.1_02137 CDS open 2505952-2507082 1131_na     376_aa PhoH-like protein
2138 CP040503.1 GCA_005886335.1_02138 CDS open 2507079-2507573 495_na     164_aa ybeY Endoribonuclease YbeY
2139 CP040503.1 GCA_005886335.1_02139 CDS open 2507570-2508817 1248_na     415_aa hypothetical protein
2140 CP040503.1 GCA_005886335.1_02140 CDS open 2508810-2509700 891_na     296_aa era_2 GTPase Era
2141 CP040503.1 GCA_005886335.1_02141 CDS open 2509701-2511248 1548_na     515_aa hypothetical protein
2142 CP040503.1 GCA_005886335.1_02142 CDS open 2511300-2512073 774_na     257_aa prpC Protein phosphatase PrpC
2143 CP040503.1 GCA_005886335.1_02143 CDS open 2512070-2512774 705_na     234_aa hypothetical protein
2144 CP040503.1 GCA_005886335.1_02144 CDS open 2512778-2514517 1740_na     579_aa pknD_4 Serinethreonine-protein kinase PknD
2145 CP040503.1 GCA_005886335.1_02145 CDS open 2514745-2516514 1770_na     589_aa leuA 2-isopropylmalate synthase
2146 CP040503.1 GCA_005886335.1_02146 CDS open 2516689-2517420 732_na     243_aa recO DNA repair protein RecO
2147 CP040503.1 GCA_005886335.1_02147 CDS open 2517434-2518234 801_na     266_aa Trans%2Cpolycis-polyprenyl diphosphate synthase ((2Z%2C6E)-farnesyl diphosphate specific)
2148 CP040503.1 GCA_005886335.1_02148 CDS open 2518353-2518973 621_na     206_aa pcp Pyrrolidone-carboxylate peptidase
2149 CP040503.1 GCA_005886335.1_02149 CDS open 2519117-2519767 651_na     216_aa hypothetical protein
2150 CP040503.1 GCA_005886335.1_02150 CDS open 2519783-2520682 900_na     299_aa hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
2151 CP040503.1 GCA_005886335.1_02151 CDS open 2520679-2521524 846_na     281_aa hypothetical protein
2152 CP040503.1 GCA_005886335.1_02152 CDS open 2521776-2522390 615_na     204_aa infC Translation initiation factor IF-3
2153 CP040503.1 GCA_005886335.1_02153 CDS open 2522451-2522645 195_na     64_aa rpmI 50S ribosomal protein L35
2154 CP040503.1 GCA_005886335.1_02154 CDS open 2522664-2523047 384_na     127_aa rplT 50S ribosomal protein L20
2155 CP040503.1 GCA_005886335.1_02155 CDS open 2523109-2523954 846_na     281_aa Putative TrmH family tRNArRNA methyltransferase
2156 CP040503.1 GCA_005886335.1_02156 CDS open 2524022-2524930 909_na     302_aa hypothetical protein
2157 CP040503.1 GCA_005886335.1_02157 CDS open 2524991-2526043 1053_na     350_aa hypothetical protein