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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_008728735.1)

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PROKKA Annotations for GCA_008728735.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
1 2624231 2465 19 1 59
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Annotation Table [page:6]    |    Number of Records Found: 2627 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CP041724.1 GCA_008728735.1_02501 CDS open 2514326-2515231 906_na     301_aa hypothetical protein
2502 CP041724.1 GCA_008728735.1_02502 CDS open 2515251-2515841 591_na     196_aa hypothetical protein
2503 CP041724.1 GCA_008728735.1_02503 CDS open 2516042-2516164 123_na     40_aa hypothetical protein
2504 CP041724.1 GCA_008728735.1_02504 CDS open 2516161-2517126 966_na     321_aa hypothetical protein
2505 CP041724.1 GCA_008728735.1_02505 CDS open 2517113-2518564 1452_na     483_aa hypothetical protein
2506 CP041724.1 GCA_008728735.1_02506 CDS open 2518576-2519478 903_na     300_aa hypothetical protein
2507 CP041724.1 GCA_008728735.1_02507 CDS open 2519643-2520179 537_na     178_aa hypothetical protein
2508 CP041724.1 GCA_008728735.1_02508 CDS open 2520289-2520642 354_na     117_aa hypothetical protein
2509 CP041724.1 GCA_008728735.1_02509 CDS open 2520701-2521195 495_na     164_aa hypothetical protein
2510 CP041724.1 GCA_008728735.1_02510 CDS open 2521500-2521916 417_na     138_aa hypothetical protein
2511 CP041724.1 GCA_008728735.1_02511 CDS open 2521913-2522062 150_na     49_aa hypothetical protein
2512 CP041724.1 GCA_008728735.1_02512 CDS open 2522059-2522226 168_na     55_aa hypothetical protein
2513 CP041724.1 GCA_008728735.1_02513 CDS open 2522216-2522368 153_na     50_aa hypothetical protein
2514 CP041724.1 GCA_008728735.1_02514 CDS open 2522376-2522762 387_na     128_aa hypothetical protein
2515 CP041724.1 GCA_008728735.1_02515 CDS open 2522802-2523296 495_na     164_aa hypothetical protein
2516 CP041724.1 GCA_008728735.1_02516 CDS open 2523296-2523442 147_na     48_aa hypothetical protein
2517 CP041724.1 GCA_008728735.1_02517 CDS open 2523582-2523815 234_na     77_aa hypothetical protein
2518 CP041724.1 GCA_008728735.1_02518 CDS open 2523819-2524142 324_na     107_aa hypothetical protein
2519 CP041724.1 GCA_008728735.1_02519 CDS open 2524247-2524498 252_na     83_aa hypothetical protein
2520 CP041724.1 GCA_008728735.1_02520 CDS open 2524501-2524815 315_na     104_aa hypothetical protein
2521 CP041724.1 GCA_008728735.1_02521 CDS open 2524812-2525219 408_na     135_aa hypothetical protein
2522 CP041724.1 GCA_008728735.1_02522 CDS open 2525229-2525468 240_na     79_aa hypothetical protein
2523 CP041724.1 GCA_008728735.1_02523 CDS open 2525471-2525629 159_na     52_aa hypothetical protein
2524 CP041724.1 GCA_008728735.1_02524 CDS open 2525623-2526393 771_na     256_aa hypothetical protein
2525 CP041724.1 GCA_008728735.1_02525 CDS open 2526404-2527168 765_na     254_aa hypothetical protein
2526 CP041724.1 GCA_008728735.1_02526 CDS open 2527168-2527833 666_na     221_aa hypothetical protein
2527 CP041724.1 GCA_008728735.1_02527 CDS open 2527846-2528400 555_na     184_aa hypothetical protein
2528 CP041724.1 GCA_008728735.1_02528 CDS open 2528403-2528621 219_na     72_aa hypothetical protein
2529 CP041724.1 GCA_008728735.1_02529 CDS open 2528611-2529390 780_na     259_aa hypothetical protein
2530 CP041724.1 GCA_008728735.1_02530 CDS open 2529383-2529604 222_na     73_aa hypothetical protein
2531 CP041724.1 GCA_008728735.1_02531 CDS open 2529570-2529848 279_na     92_aa hypothetical protein
2532 CP041724.1 GCA_008728735.1_02532 CDS open 2529907-2530086 180_na     59_aa hypothetical protein
2533 CP041724.1 GCA_008728735.1_02533 CDS open 2530150-2530254 105_na     34_aa hypothetical protein
2534 CP041724.1 GCA_008728735.1_02534 CDS open 2530312-2530800 489_na     162_aa hypothetical protein
2535 CP041724.1 GCA_008728735.1_02535 CDS open 2531011-2531847 837_na     278_aa hypothetical protein
2536 CP041724.1 GCA_008728735.1_02536 CDS open 2531905-2532168 264_na     87_aa hypothetical protein
2537 CP041724.1 GCA_008728735.1_02537 CDS open 2532173-2532334 162_na     53_aa hypothetical protein
2538 CP041724.1 GCA_008728735.1_02538 CDS open 2532347-2532616 270_na     89_aa hypothetical protein
2539 CP041724.1 GCA_008728735.1_02539 CDS open 2532751-2533467 717_na     238_aa lexA_3 LexA repressor
2540 CP041724.1 GCA_008728735.1_02540 CDS open 2533479-2533613 135_na     44_aa hypothetical protein
2541 CP041724.1 GCA_008728735.1_02541 CDS open 2533672-2533815 144_na     47_aa hypothetical protein
2542 CP041724.1 GCA_008728735.1_02542 CDS open 2533948-2534130 183_na     60_aa hypothetical protein
2543 CP041724.1 GCA_008728735.1_02543 CDS open 2534284-2535099 816_na     271_aa hypothetical protein
2544 CP041724.1 GCA_008728735.1_02544 CDS open 2535136-2535324 189_na     62_aa hypothetical protein
2545 CP041724.1 GCA_008728735.1_02545 CDS open 2535393-2536775 1383_na     460_aa hypothetical protein
2546 CP041724.1 GCA_008728735.1_02546 CDS open 2536955-2537995 1041_na     346_aa rclA_2 putative pyridine nucleotide-disulfide oxidoreductase RclA
2547 CP041724.1 GCA_008728735.1_02547 CDS open 2538184-2538288 105_na     34_aa hypothetical protein
2548 CP041724.1 GCA_008728735.1_02548 CDS open 2538329-2538670 342_na     113_aa hypothetical protein
2549 CP041724.1 GCA_008728735.1_02549 CDS open 2538836-2539912 1077_na     358_aa Phosphomevalonate kinase
2550 CP041724.1 GCA_008728735.1_02550 CDS open 2539925-2540908 984_na     327_aa thrB_2 Homoserine kinase
2551 CP041724.1 GCA_008728735.1_02551 CDS open 2540913-2541836 924_na     307_aa galK Galactokinase
2552 CP041724.1 GCA_008728735.1_02552 CDS open 2542279-2543112 834_na     277_aa lipL Octanoyl-[GcvH]:protein N-octanoyltransferase
2553 CP041724.1 GCA_008728735.1_02553 CDS open 2543112-2544098 987_na     328_aa pta Phosphate acetyltransferase
2554 CP041724.1 GCA_008728735.1_02554 CDS open 2544260-2545009 750_na     249_aa Putative heme-dependent peroxidase
2555 CP041724.1 GCA_008728735.1_02555 CDS open 2545529-2545651 123_na     40_aa hypothetical protein
2556 CP041724.1 GCA_008728735.1_02556 CDS open 2545682-2546101 420_na     139_aa hypothetical protein
2557 CP041724.1 GCA_008728735.1_02557 CDS open 2546184-2546393 210_na     69_aa hypothetical protein
2558 CP041724.1 misc_RNA open 2546479-2546602 RsaA
2559 CP041724.1 GCA_008728735.1_02559 CDS open 2546813-2547580 768_na     255_aa hypothetical protein
2560 CP041724.1 GCA_008728735.1_02560 CDS open 2547593-2548045 453_na     150_aa hypothetical protein
2561 CP041724.1 GCA_008728735.1_02561 CDS open 2548153-2549628 1476_na     491_aa yhdG_2 putative amino acid permease YhdG
2562 CP041724.1 GCA_008728735.1_02562 CDS open 2549701-2550072 372_na     123_aa hypothetical protein
2563 CP041724.1 GCA_008728735.1_02563 CDS open 2550093-2550488 396_na     131_aa hypothetical protein
2564 CP041724.1 GCA_008728735.1_02564 CDS open 2550481-2551149 669_na     222_aa ung Uracil-DNA glycosylase
2565 CP041724.1 GCA_008728735.1_02565 CDS open 2551302-2552294 993_na     330_aa yxeI_2 putative protein YxeI
2566 CP041724.1 GCA_008728735.1_02566 CDS open 2552383-2553213 831_na     276_aa pdxK Pyridoxine kinase
2567 CP041724.1 GCA_008728735.1_02567 CDS open 2553509-2554642 1134_na     377_aa tet(X)_2 Flavin-dependent monooxygenase
2568 CP041724.1 GCA_008728735.1_02568 CDS open 2554793-2554963 171_na     56_aa hypothetical protein
2569 CP041724.1 GCA_008728735.1_02569 CDS open 2555143-2555820 678_na     225_aa scdA Iron-sulfur cluster repair protein ScdA
2570 CP041724.1 GCA_008728735.1_02570 CDS open 2555994-2557406 1413_na     470_aa proP Prolinebetaine transporter
2571 CP041724.1 GCA_008728735.1_02571 CDS open 2558077-2558625 549_na     182_aa hxlB 3-hexulose-6-phosphate isomerase
2572 CP041724.1 GCA_008728735.1_02572 CDS open 2558627-2559259 633_na     210_aa 3-hexulose-6-phosphate synthase
2573 CP041724.1 GCA_008728735.1_02573 CDS open 2559524-2559886 363_na     120_aa yojF putative protein YojF
2574 CP041724.1 GCA_008728735.1_02574 CDS open 2559900-2560565 666_na     221_aa bshB2 putative N-acetyl-alpha-D-glucosaminyl L-malate deacetylase 2
2575 CP041724.1 GCA_008728735.1_02575 CDS open 2560580-2561461 882_na     293_aa folE2 GTP cyclohydrolase FolE2
2576 CP041724.1 GCA_008728735.1_02576 CDS open 2561634-2564825 3192_na     1063_aa hypothetical protein
2577 CP041724.1 GCA_008728735.1_02577 CDS open 2565005-2566423 1419_na     472_aa hypothetical protein
2578 CP041724.1 GCA_008728735.1_02578 CDS open 2566447-2566635 189_na     62_aa hypothetical protein
2579 CP041724.1 GCA_008728735.1_02579 CDS open 2566751-2572336 5586_na     1861_aa hypothetical protein
2580 CP041724.1 GCA_008728735.1_02580 CDS open 2572592-2573158 567_na     188_aa azo1 FMN-dependent NADPH-azoreductase
2581 CP041724.1 GCA_008728735.1_02581 CDS open 2573174-2574043 870_na     289_aa ywpJ Phosphatase YwpJ
2582 CP041724.1 GCA_008728735.1_02582 CDS open 2574167-2574643 477_na     158_aa tadA_2 tRNA-specific adenosine deaminase
2583 CP041724.1 GCA_008728735.1_02583 CDS open 2574707-2575324 618_na     205_aa dgk Deoxyguanosine kinase
2584 CP041724.1 GCA_008728735.1_02584 CDS open 2575317-2575991 675_na     224_aa dck Deoxyadenosinedeoxycytidine kinase
2585 CP041724.1 GCA_008728735.1_02585 CDS open 2576180-2576872 693_na     230_aa gph Phosphoglycolate phosphatase
2586 CP041724.1 GCA_008728735.1_02586 CDS open 2577472-2578590 1119_na     372_aa ald1 Alanine dehydrogenase 1
2587 CP041724.1 GCA_008728735.1_02587 CDS open 2578686-2579726 1041_na     346_aa tdcB L-threonine dehydratase catabolic TdcB
2588 CP041724.1 GCA_008728735.1_02588 CDS open 2579755-2581074 1320_na     439_aa steT Serinethreonine exchanger SteT
2589 CP041724.1 GCA_008728735.1_02589 CDS open 2581888-2582964 1077_na     358_aa ilvE putative branched-chain-amino-acid aminotransferase
2590 CP041724.1 GCA_008728735.1_02590 CDS open 2583185-2584138 954_na     317_aa putative epimerasedehydratase
2591 CP041724.1 GCA_008728735.1_02591 CDS open 2584838-2585461 624_na     207_aa argO Arginine exporter protein ArgO
2592 CP041724.1 GCA_008728735.1_02592 CDS open 2585512-2585931 420_na     139_aa rppH RNA pyrophosphohydrolase
2593 CP041724.1 GCA_008728735.1_02593 CDS open 2585942-2586448 507_na     168_aa hypothetical protein
2594 CP041724.1 GCA_008728735.1_02594 CDS open 2586557-2587531 975_na     324_aa arcB Delta(1)-pyrroline-2-carboxylate reductase
2595 CP041724.1 GCA_008728735.1_02595 CDS open 2587634-2588824 1191_na     396_aa Putative pyridoxal phosphate-dependent acyltransferase
2596 CP041724.1 GCA_008728735.1_02596 CDS open 2589394-2590560 1167_na     388_aa scmP_4 N-acetylcysteine deacetylase
2597 CP041724.1 GCA_008728735.1_02597 CDS open 2590675-2591859 1185_na     394_aa tuf Elongation factor Tu
2598 CP041724.1 GCA_008728735.1_02598 CDS open 2592078-2594159 2082_na     693_aa fusA Elongation factor G
2599 CP041724.1 GCA_008728735.1_02599 CDS open 2594279-2594749 471_na     156_aa rpsG 30S ribosomal protein S7
2600 CP041724.1 GCA_008728735.1_02600 CDS open 2594820-2595233 414_na     137_aa rpsL 30S ribosomal protein S12
2601 CP041724.1 GCA_008728735.1_02601 CDS open 2595323-2595583 261_na     86_aa rplGB Ribosome-associated protein L7Ae-like protein
2602 CP041724.1 GCA_008728735.1_02602 CDS open 2595845-2599468 3624_na     1207_aa rpoC DNA-directed RNA polymerase subunit beta
2603 CP041724.1 GCA_008728735.1_02603 CDS open 2599627-2603181 3555_na     1184_aa rpoB DNA-directed RNA polymerase subunit beta
2604 CP041724.1 GCA_008728735.1_02604 CDS open 2603383-2603991 609_na     202_aa rlmG Ribosomal RNA large subunit methyltransferase G
2605 CP041724.1 GCA_008728735.1_02605 CDS open 2604267-2604635 369_na     122_aa rplL 50S ribosomal protein L7L12
2606 CP041724.1 GCA_008728735.1_02606 CDS open 2604673-2605173 501_na     166_aa rplJ 50S ribosomal protein L10
2607 CP041724.1 misc_RNA open 2605211-2605359 L10_leader
2608 CP041724.1 GCA_008728735.1_02608 CDS open 2605446-2606141 696_na     231_aa rplA 50S ribosomal protein L1
2609 CP041724.1 GCA_008728735.1_02609 CDS open 2606357-2606779 423_na     140_aa rplK 50S ribosomal protein L11
2610 CP041724.1 GCA_008728735.1_02610 CDS open 2606980-2607528 549_na     182_aa nusG Transcription terminationantitermination protein NusG
2611 CP041724.1 GCA_008728735.1_02611 CDS open 2607546-2607740 195_na     64_aa secE Protein translocase subunit SecE
2612 CP041724.1 GCA_008728735.1_02612 CDS open 2608074-2608616 543_na     180_aa hypothetical protein
2613 CP041724.1 GCA_008728735.1_02613 CDS open 2608727-2609254 528_na     175_aa yacP putative protein YacP
2614 CP041724.1 GCA_008728735.1_02614 CDS open 2609254-2610000 747_na     248_aa Putative TrmH family tRNArRNA methyltransferase
2615 CP041724.1 GCA_008728735.1_02615 CDS open 2610003-2610407 405_na     134_aa mrnC Mini-ribonuclease 3
2616 CP041724.1 GCA_008728735.1_02616 CDS open 2610400-2611800 1401_na     466_aa cysS Cysteine--tRNA ligase
2617 CP041724.1 GCA_008728735.1_02617 CDS open 2611784-2612425 642_na     213_aa cysE Serine acetyltransferase
2618 CP041724.1 GCA_008728735.1_02618 CDS open 2612788-2614245 1458_na     485_aa gltX Glutamate--tRNA ligase
2619 CP041724.1 GCA_008728735.1_02619 CDS open 2614569-2615636 1068_na     355_aa yacL putative PIN and TRAM-domain containing protein YacL
2620 CP041724.1 GCA_008728735.1_02620 CDS open 2615671-2617038 1368_na     455_aa radA DNA repair protein RadA
2621 CP041724.1 GCA_008728735.1_02621 CDS open 2617269-2619728 2460_na     819_aa clpC ATP-dependent Clp protease ATP-binding subunit ClpC
2622 CP041724.1 GCA_008728735.1_02622 CDS open 2619742-2620758 1017_na     338_aa mcsB Protein-arginine kinase
2623 CP041724.1 GCA_008728735.1_02623 CDS open 2620748-2621305 558_na     185_aa mcsA Protein-arginine kinase activator protein
2624 CP041724.1 GCA_008728735.1_02624 CDS open 2621332-2621802 471_na     156_aa ctsR Transcriptional regulator CtsR
2625 CP041724.1 GCA_008728735.1_02625 CDS open 2621948-2623162 1215_na     404_aa nupC_2 Nucleoside permease NupC
2626 CP041724.1 GCA_008728735.1_02626 CDS open 2623393-2623947 555_na     184_aa pdxT Pyridoxal 5-phosphate synthase subunit PdxT
2627 CP041724.1 GCA_008728735.1_02627 CDS open 2623951-2624166 216_na     71_aa pdxS Pyridoxal 5-phosphate synthase subunit PdxS