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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_008728755.1)

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PROKKA Annotations for GCA_008728755.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
1 2652107 2469 19 1 59
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Annotation Table [page:6]    |    Number of Records Found: 2635 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CP041725.1 GCA_008728755.1_02501 CDS open 2505598-2509305 3708_na     1235_aa dltA_5 D-alanine--D-alanyl carrier protein ligase
2502 CP041725.1 GCA_008728755.1_02502 CDS open 2509581-2509736 156_na     51_aa hypothetical protein
2503 CP041725.1 GCA_008728755.1_02503 CDS open 2509675-2509881 207_na     68_aa lpl2 putative lipoprotein
2504 CP041725.1 GCA_008728755.1_02504 CDS open 2509942-2510490 549_na     182_aa putative protein
2505 CP041725.1 GCA_008728755.1_02505 CDS open 2510750-2511535 786_na     261_aa putative protein
2506 CP041725.1 GCA_008728755.1_02506 CDS open 2511626-2512393 768_na     255_aa putative protein
2507 CP041725.1 GCA_008728755.1_02507 CDS open 2512538-2513248 711_na     236_aa putative protein
2508 CP041725.1 GCA_008728755.1_02508 CDS open 2513585-2514295 711_na     236_aa putative protein
2509 CP041725.1 GCA_008728755.1_02509 CDS open 2514292-2515617 1326_na     441_aa hypothetical protein
2510 CP041725.1 GCA_008728755.1_02510 CDS open 2515617-2515943 327_na     108_aa hypothetical protein
2511 CP041725.1 GCA_008728755.1_02511 CDS open 2515946-2516233 288_na     95_aa hypothetical protein
2512 CP041725.1 GCA_008728755.1_02512 CDS open 2516651-2517613 963_na     320_aa ldh2 L-lactate dehydrogenase 2
2513 CP041725.1 GCA_008728755.1_02513 CDS open 2518325-2519038 714_na     237_aa yurK putative HTH-type transcriptional regulator YurK
2514 CP041725.1 GCA_008728755.1_02514 CDS open 2519067-2519642 576_na     191_aa agaS Putative D-galactosamine-6-phosphate deaminase AgaS
2515 CP041725.1 GCA_008728755.1_02515 CDS open 2519626-2520081 456_na     151_aa hypothetical protein
2516 CP041725.1 GCA_008728755.1_02516 CDS open 2520672-2521604 933_na     310_aa lacD2 Tagatose 1%2C6-diphosphate aldolase 2
2517 CP041725.1 GCA_008728755.1_02517 CDS open 2521804-2522283 480_na     159_aa manX_1 PTS system mannose-specific EIIAB component
2518 CP041725.1 GCA_008728755.1_02518 CDS open 2522303-2523202 900_na     299_aa hypothetical protein
2519 CP041725.1 GCA_008728755.1_02519 CDS open 2523186-2524079 894_na     297_aa manZ PTS system mannose-specific EIID component
2520 CP041725.1 GCA_008728755.1_02520 CDS open 2524097-2524492 396_na     131_aa manX_2 PTS system mannose-specific EIIAB component
2521 CP041725.1 GCA_008728755.1_02521 CDS open 2524660-2525361 702_na     233_aa kdpE KDP operon transcriptional regulatory protein KdpE
2522 CP041725.1 GCA_008728755.1_02522 CDS open 2525363-2528017 2655_na     884_aa kdpD Sensor protein KdpD
2523 CP041725.1 GCA_008728755.1_02523 CDS open 2528285-2529961 1677_na     558_aa kdpA Potassium-transporting ATPase potassium-binding subunit
2524 CP041725.1 GCA_008728755.1_02524 CDS open 2529979-2532000 2022_na     673_aa kdpB Potassium-transporting ATPase ATP-binding subunit
2525 CP041725.1 GCA_008728755.1_02525 CDS open 2532017-2532580 564_na     187_aa kdpC Potassium-transporting ATPase KdpC subunit
2526 CP041725.1 GCA_008728755.1_02526 CDS open 2532887-2534959 2073_na     690_aa isdB Iron-regulated surface determinant protein B
2527 CP041725.1 GCA_008728755.1_02527 CDS open 2535269-2535853 585_na     194_aa hypothetical protein
2528 CP041725.1 GCA_008728755.1_02528 CDS open 2535855-2536562 708_na     235_aa ecfT_3 Energy-coupling factor transporter transmembrane protein EcfT
2529 CP041725.1 GCA_008728755.1_02529 CDS open 2536574-2538034 1461_na     486_aa ykoD_3 Putative HMPthiamine import ATP-binding protein YkoD
2530 CP041725.1 GCA_008728755.1_02530 CDS open 2538119-2540059 1941_na     646_aa hypothetical protein
2531 CP041725.1 GCA_008728755.1_02531 CDS open 2540689-2541375 687_na     228_aa isdC Iron-regulated surface determinant protein C
2532 CP041725.1 GCA_008728755.1_02532 CDS open 2541378-2542775 1398_na     465_aa hypothetical protein
2533 CP041725.1 GCA_008728755.1_02533 CDS open 2542784-2543674 891_na     296_aa isdE High-affinity heme uptake system protein IsdE
2534 CP041725.1 GCA_008728755.1_02534 CDS open 2543696-2544670 975_na     324_aa isdF putative heme-iron transport system permease protein IsdF
2535 CP041725.1 GCA_008728755.1_02535 CDS open 2544651-2545430 780_na     259_aa fepC_2 Ferric enterobactin transport ATP-binding protein FepC
2536 CP041725.1 GCA_008728755.1_02536 CDS open 2545427-2546149 723_na     240_aa srtB Sortase B
2537 CP041725.1 GCA_008728755.1_02537 CDS open 2546167-2546490 324_na     107_aa isdG_2 Heme oxygenase (staphylobilin-producing) 1
2538 CP041725.1 GCA_008728755.1_02538 CDS open 2546564-2548060 1497_na     498_aa hypothetical protein
2539 CP041725.1 GCA_008728755.1_02539 CDS open 2548414-2549412 999_na     332_aa yfhA putative siderophore transport system permease protein YfhA
2540 CP041725.1 GCA_008728755.1_02540 CDS open 2549409-2550404 996_na     331_aa yfiZ_2 putative siderophore transport system permease protein YfiZ
2541 CP041725.1 GCA_008728755.1_02541 CDS open 2550420-2551412 993_na     330_aa yfiY putative siderophore-binding lipoprotein YfiY
2542 CP041725.1 GCA_008728755.1_02542 CDS open 2551775-2552383 609_na     202_aa paiB Protease synthase and sporulation protein PAI 2
2543 CP041725.1 GCA_008728755.1_02543 CDS open 2552397-2552903 507_na     168_aa paiA_2 Spermidinespermine N(1)-acetyltransferase
2544 CP041725.1 GCA_008728755.1_02544 CDS open 2552921-2553373 453_na     150_aa hypothetical protein
2545 CP041725.1 GCA_008728755.1_02545 CDS open 2553574-2554506 933_na     310_aa panE_2 2-dehydropantoate 2-reductase
2546 CP041725.1 GCA_008728755.1_02546 CDS open 2554975-2556093 1119_na     372_aa msmX Oligosaccharides import ATP-binding protein MsmX
2547 CP041725.1 GCA_008728755.1_02547 CDS open 2556121-2557089 969_na     322_aa yteP putative multiple-sugar transport system permease YteP
2548 CP041725.1 GCA_008728755.1_02548 CDS open 2557100-2558791 1692_na     563_aa hypothetical protein
2549 CP041725.1 GCA_008728755.1_02549 CDS open 2558805-2559701 897_na     298_aa araQ L-arabinose transport system permease protein AraQ
2550 CP041725.1 GCA_008728755.1_02550 CDS open 2559715-2560575 861_na     286_aa cpdA_3 3%2C5-cyclic adenosine monophosphate phosphodiesterase CpdA
2551 CP041725.1 GCA_008728755.1_02551 CDS open 2560625-2561899 1275_na     424_aa hypothetical protein
2552 CP041725.1 GCA_008728755.1_02552 CDS open 2561892-2562656 765_na     254_aa srlR_2 Glucitol operon repressor
2553 CP041725.1 GCA_008728755.1_02553 CDS open 2562780-2563358 579_na     192_aa gpm2_2 Acid phosphatase
2554 CP041725.1 GCA_008728755.1_02554 CDS open 2563630-2564676 1047_na     348_aa saeS Histidine protein kinase SaeS
2555 CP041725.1 GCA_008728755.1_02555 CDS open 2564677-2565357 681_na     226_aa saeR Response regulator SaeR
2556 CP041725.1 GCA_008728755.1_02556 CDS open 2565335-2565817 483_na     160_aa hypothetical protein
2557 CP041725.1 GCA_008728755.1_02557 CDS open 2565923-2566351 429_na     142_aa hypothetical protein
2558 CP041725.1 GCA_008728755.1_02558 CDS open 2567016-2567177 162_na     53_aa hypothetical protein
2559 CP041725.1 GCA_008728755.1_02559 CDS open 2567279-2567890 612_na     203_aa hypothetical protein
2560 CP041725.1 GCA_008728755.1_02560 CDS open 2568036-2568230 195_na     64_aa hypothetical protein
2561 CP041725.1 GCA_008728755.1_02561 CDS open 2568464-2569255 792_na     263_aa hypothetical protein
2562 CP041725.1 GCA_008728755.1_02562 CDS open 2569519-2570388 870_na     289_aa cmpR HTH-type transcriptional activator CmpR
2563 CP041725.1 GCA_008728755.1_02563 CDS open 2570525-2571562 1038_na     345_aa potA_2 Spermidineputrescine import ATP-binding protein PotA
2564 CP041725.1 GCA_008728755.1_02564 CDS open 2571567-2572589 1023_na     340_aa putative protein
2565 CP041725.1 GCA_008728755.1_02565 CDS open 2572591-2574249 1659_na     552_aa hypothetical protein
2566 CP041725.1 GCA_008728755.1_02566 CDS open 2574291-2574905 615_na     204_aa apaH Bis(5-nucleosyl)-tetraphosphatase%2C symmetrical
2567 CP041725.1 GCA_008728755.1_02567 CDS open 2575374-2576072 699_na     232_aa xynR HTH-type transcriptional regulator XynR
2568 CP041725.1 GCA_008728755.1_02568 CDS open 2576069-2577019 951_na     316_aa kdgK 2-dehydro-3-deoxygluconokinase
2569 CP041725.1 GCA_008728755.1_02569 CDS open 2577027-2577650 624_na     207_aa kdgA KHGKDPG aldolase
2570 CP041725.1 GCA_008728755.1_02570 CDS open 2577663-2578808 1146_na     381_aa dgoD D-galactonate dehydratase
2571 CP041725.1 GCA_008728755.1_02571 CDS open 2578831-2580192 1362_na     453_aa gntT_2 High-affinity gluconate transporter
2572 CP041725.1 GCA_008728755.1_02572 CDS open 2580407-2580973 567_na     188_aa azoR_2 FMN-dependent NADH-azoreductase
2573 CP041725.1 GCA_008728755.1_02573 CDS open 2580966-2581379 414_na     137_aa hypothetical protein
2574 CP041725.1 misc_RNA open 2581684-2581898 T-box
2575 CP041725.1 GCA_008728755.1_02575 CDS open 2581949-2583865 1917_na     638_aa thrZ Threonine--tRNA ligase 2
2576 CP041725.1 GCA_008728755.1_02576 CDS open 2584064-2585566 1503_na     500_aa oxyL 6-methylpretetramide 4-monooxygenase
2577 CP041725.1 GCA_008728755.1_02577 CDS open 2585879-2587237 1359_na     452_aa brnQ_2 Branched-chain amino acid transport system 2 carrier protein
2578 CP041725.1 GCA_008728755.1_02578 CDS open 2587382-2587540 159_na     52_aa hypothetical protein
2579 CP041725.1 GCA_008728755.1_02579 CDS open 2587854-2588582 729_na     242_aa hypothetical protein
2580 CP041725.1 GCA_008728755.1_02580 CDS open 2588596-2591208 2613_na     870_aa ruvB_3 Holliday junction ATP-dependent DNA helicase RuvB
2581 CP041725.1 GCA_008728755.1_02581 CDS open 2591285-2592085 801_na     266_aa ybjI_2 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YbjI
2582 CP041725.1 GCA_008728755.1_02582 CDS open 2592215-2593573 1359_na     452_aa ygcS Inner membrane metabolite transport protein YgcS
2583 CP041725.1 GCA_008728755.1_02583 CDS open 2593738-2593959 222_na     73_aa hypothetical protein
2584 CP041725.1 GCA_008728755.1_02584 CDS open 2594472-2596073 1602_na     533_aa cntA_2 Metal-staphylopine-binding protein CntA
2585 CP041725.1 GCA_008728755.1_02585 CDS open 2596086-2597027 942_na     313_aa cntB_2 Metal-staphylopine import system permease protein CntB
2586 CP041725.1 GCA_008728755.1_02586 CDS open 2597018-2597887 870_na     289_aa cntC Metal-staphylopine import system permease protein CntC
2587 CP041725.1 GCA_008728755.1_02587 CDS open 2597884-2598699 816_na     271_aa cntD_2 Metal-staphylopine import system ATP-binding protein CntD
2588 CP041725.1 GCA_008728755.1_02588 CDS open 2598692-2599441 750_na     249_aa cntF Metal-staphylopine import system ATP-binding protein CntF
2589 CP041725.1 GCA_008728755.1_02589 CDS open 2599453-2600643 1191_na     396_aa cntE Staphylopine export protein
2590 CP041725.1 GCA_008728755.1_02590 CDS open 2600780-2602093 1314_na     437_aa shpI Neutral metalloprotease ShpI
2591 CP041725.1 GCA_008728755.1_02591 CDS open 2602305-2602892 588_na     195_aa ydeA putative protease YdeA
2592 CP041725.1 GCA_008728755.1_02592 CDS open 2603094-2604725 1632_na     543_aa yveA Aspartate-proton symporter
2593 CP041725.1 GCA_008728755.1_02593 CDS open 2604872-2605351 480_na     159_aa msrAB Peptide methionine sulfoxide reductase msrAmsrB
2594 CP041725.1 GCA_008728755.1_02594 CDS open 2605546-2606226 681_na     226_aa hypothetical protein
2595 CP041725.1 GCA_008728755.1_02595 CDS open 2606207-2607175 969_na     322_aa nlhH Carboxylesterase NlhH
2596 CP041725.1 GCA_008728755.1_02596 CDS open 2607313-2607912 600_na     199_aa hypothetical protein
2597 CP041725.1 GCA_008728755.1_02597 CDS open 2608327-2610366 2040_na     679_aa ptsG_2 PTS system glucose-specific EIICBA component
2598 CP041725.1 GCA_008728755.1_02598 CDS open 2610732-2611652 921_na     306_aa fhuD_2 Iron(3+)-hydroxamate-binding protein FhuD
2599 CP041725.1 GCA_008728755.1_02599 CDS open 2611771-2612463 693_na     230_aa ybbA putative protein YbbA
2600 CP041725.1 GCA_008728755.1_02600 CDS open 2612585-2613700 1116_na     371_aa hypothetical protein
2601 CP041725.1 GCA_008728755.1_02601 CDS open 2613899-2615134 1236_na     411_aa hypothetical protein
2602 CP041725.1 misc_RNA open 2615129-2615311 S35
2603 CP041725.1 GCA_008728755.1_02603 CDS open 2615525-2616121 597_na     198_aa hypothetical protein
2604 CP041725.1 GCA_008728755.1_02604 CDS open 2616355-2618841 2487_na     828_aa ydgH Putative membrane protein YdgH
2605 CP041725.1 GCA_008728755.1_02605 CDS open 2619017-2620048 1032_na     343_aa arnA Bifunctional polymyxin resistance protein ArnA
2606 CP041725.1 GCA_008728755.1_02606 CDS open 2620405-2620974 570_na     189_aa hypothetical protein
2607 CP041725.1 GCA_008728755.1_02607 CDS open 2621288-2623534 2247_na     748_aa pflB Formate acetyltransferase
2608 CP041725.1 GCA_008728755.1_02608 CDS open 2623556-2624311 756_na     251_aa pflA Pyruvate formate-lyase-activating enzyme
2609 CP041725.1 GCA_008728755.1_02609 CDS open 2624435-2624752 318_na     105_aa hypothetical protein
2610 CP041725.1 GCA_008728755.1_02610 CDS open 2624749-2626041 1293_na     430_aa arsB Arsenical pump membrane protein
2611 CP041725.1 GCA_008728755.1_02611 CDS open 2626192-2627010 819_na     272_aa cysA_2 Sulfatethiosulfate import ATP-binding protein CysA
2612 CP041725.1 GCA_008728755.1_02612 CDS open 2627010-2627717 708_na     235_aa hypothetical protein
2613 CP041725.1 GCA_008728755.1_02613 CDS open 2627714-2627878 165_na     54_aa hypothetical protein
2614 CP041725.1 GCA_008728755.1_02614 CDS open 2628093-2628866 774_na     257_aa budC Diacetyl reductase [(S)-acetoin forming]
2615 CP041725.1 GCA_008728755.1_02615 CDS open 2629115-2629315 201_na     66_aa cspLA Cold shock-like protein CspLA
2616 CP041725.1 GCA_008728755.1_02616 CDS open 2629371-2629946 576_na     191_aa hypothetical protein
2617 CP041725.1 GCA_008728755.1_02617 CDS open 2630101-2631798 1698_na     565_aa cocE Cocaine esterase
2618 CP041725.1 GCA_008728755.1_02618 CDS open 2631976-2633181 1206_na     401_aa hypothetical protein
2619 CP041725.1 GCA_008728755.1_02619 CDS open 2633383-2633883 501_na     166_aa crtK-2 Tryptophan-rich protein TspO
2620 CP041725.1 GCA_008728755.1_02620 CDS open 2633876-2634358 483_na     160_aa hypothetical protein
2621 CP041725.1 GCA_008728755.1_02621 CDS open 2634370-2635869 1500_na     499_aa crtP 4%2C4-diaponeurosporene oxygenase
2622 CP041725.1 GCA_008728755.1_02622 CDS open 2635871-2636989 1119_na     372_aa crtQ 4%2C4-diaponeurosporenoate glycosyltransferase
2623 CP041725.1 GCA_008728755.1_02623 CDS open 2637025-2637888 864_na     287_aa crtM 4%2C4-diapophytoene synthase
2624 CP041725.1 GCA_008728755.1_02624 CDS open 2637891-2639396 1506_na     501_aa crtN 4%2C4-diapophytoene desaturase (4%2C4-diaponeurosporene-forming)
2625 CP041725.1 GCA_008728755.1_02625 CDS open 2639569-2640741 1173_na     390_aa mdtG Multidrug resistance protein MdtG
2626 CP041725.1 GCA_008728755.1_02626 CDS open 2641186-2642127 942_na     313_aa hypothetical protein
2627 CP041725.1 GCA_008728755.1_02627 CDS open 2642162-2642635 474_na     157_aa hypothetical protein
2628 CP041725.1 GCA_008728755.1_02628 CDS open 2642762-2643433 672_na     223_aa lnrL_2 Linearmycin resistance ATP-binding protein LnrL
2629 CP041725.1 GCA_008728755.1_02629 CDS open 2643448-2644368 921_na     306_aa hypothetical protein
2630 CP041725.1 GCA_008728755.1_02630 CDS open 2644365-2645531 1167_na     388_aa hypothetical protein
2631 CP041725.1 GCA_008728755.1_02631 CDS open 2645810-2647306 1497_na     498_aa hypothetical protein
2632 CP041725.1 GCA_008728755.1_02632 CDS open 2647331-2647927 597_na     198_aa hypothetical protein
2633 CP041725.1 GCA_008728755.1_02633 CDS open 2648303-2648986 684_na     227_aa hypothetical protein
2634 CP041725.1 GCA_008728755.1_02634 CDS open 2648992-2650545 1554_na     517_aa cntA_3 Metal-staphylopine-binding protein CntA
2635 CP041725.1 GCA_008728755.1_02635 CDS open 2650545-2651495 951_na     316_aa nikB Nickel transport system permease protein NikB