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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_008728795.1)

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PROKKA Annotations for GCA_008728795.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
1 2647211 2457 19 1 61
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Annotation Table [page:6]    |    Number of Records Found: 2624 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CP041727.1 GCA_008728795.1_02501 CDS open 2530792-2533746 2955_na     984_aa Putative formate dehydrogenase
2502 CP041727.1 GCA_008728795.1_02502 CDS open 2533746-2534216 471_na     156_aa hypothetical protein
2503 CP041727.1 GCA_008728795.1_02503 CDS open 2534652-2535425 774_na     257_aa atl_2 Bifunctional autolysin
2504 CP041727.1 GCA_008728795.1_02504 CDS open 2535514-2535618 105_na     34_aa hypothetical protein
2505 CP041727.1 misc_RNA open 2535608-2535941 tsr24
2506 CP041727.1 GCA_008728795.1_02506 CDS open 2536150-2537106 957_na     318_aa Putative 2-hydroxyacid dehydrogenase
2507 CP041727.1 GCA_008728795.1_02507 CDS open 2537172-2537486 315_na     104_aa gdnD putative guanidinium efflux system subunit GdnD
2508 CP041727.1 GCA_008728795.1_02508 CDS open 2537486-2537818 333_na     110_aa gdnC putative guanidinium efflux system subunit GdnC
2509 CP041727.1 GCA_008728795.1_02509 CDS open 2538231-2538767 537_na     178_aa hypothetical protein
2510 CP041727.1 GCA_008728795.1_02510 CDS open 2539066-2539488 423_na     140_aa hypothetical protein
2511 CP041727.1 GCA_008728795.1_02511 CDS open 2539720-2540793 1074_na     357_aa odh Opine dehydrogenase
2512 CP041727.1 GCA_008728795.1_02512 CDS open 2540836-2542227 1392_na     463_aa mleN_2 Malate-2H(+)Na(+)-lactate antiporter
2513 CP041727.1 GCA_008728795.1_02513 CDS open 2542938-2543675 738_na     245_aa ssaA_2 Staphylococcal secretory antigen SsaA
2514 CP041727.1 GCA_008728795.1_02514 CDS open 2544246-2546222 1977_na     658_aa rhaS HTH-type transcriptional activator RhaS
2515 CP041727.1 GCA_008728795.1_02515 CDS open 2546259-2546999 741_na     246_aa hypothetical protein
2516 CP041727.1 GCA_008728795.1_02516 CDS open 2547029-2547349 321_na     106_aa hypothetical protein
2517 CP041727.1 GCA_008728795.1_02517 CDS open 2547721-2548062 342_na     113_aa sarR HTH-type transcriptional regulator SarR
2518 CP041727.1 GCA_008728795.1_02518 CDS open 2548220-2550313 2094_na     697_aa clpL ATP-dependent Clp protease ATP-binding subunit ClpL
2519 CP041727.1 GCA_008728795.1_02519 CDS open 2550520-2551665 1146_na     381_aa ydbM Putative acyl-CoA dehydrogenase YdbM
2520 CP041727.1 GCA_008728795.1_02520 CDS open 2551905-2552813 909_na     302_aa fhuD_2 Iron(3+)-hydroxamate-binding protein FhuD
2521 CP041727.1 GCA_008728795.1_02521 CDS open 2552992-2553933 942_na     313_aa rihB Pyrimidine-specific ribonucleoside hydrolase RihB
2522 CP041727.1 GCA_008728795.1_02522 CDS open 2554003-2554548 546_na     181_aa bioY Biotin transporter BioY
2523 CP041727.1 GCA_008728795.1_02523 CDS open 2554572-2555336 765_na     254_aa hypothetical protein
2524 CP041727.1 GCA_008728795.1_02524 CDS open 2555443-2556231 789_na     262_aa fdhD Sulfur carrier protein FdhD
2525 CP041727.1 GCA_008728795.1_02525 CDS open 2556416-2557192 777_na     258_aa modA Molybdate-binding protein ModA
2526 CP041727.1 GCA_008728795.1_02526 CDS open 2557206-2557877 672_na     223_aa modB Molybdenum transport system permease protein ModB
2527 CP041727.1 GCA_008728795.1_02527 CDS open 2557878-2558483 606_na     201_aa cysA_2 Sulfatethiosulfate import ATP-binding protein CysA
2528 CP041727.1 GCA_008728795.1_02528 CDS open 2558699-2559703 1005_na     334_aa hypothetical protein
2529 CP041727.1 GCA_008728795.1_02529 CDS open 2559717-2560223 507_na     168_aa moaB Molybdenum cofactor biosynthesis protein B
2530 CP041727.1 GCA_008728795.1_02530 CDS open 2560247-2560732 486_na     161_aa moaC Cyclic pyranopterin monophosphate synthase
2531 CP041727.1 GCA_008728795.1_02531 CDS open 2560794-2562053 1260_na     419_aa moeA Molybdopterin molybdenumtransferase
2532 CP041727.1 GCA_008728795.1_02532 CDS open 2562050-2562520 471_na     156_aa hypothetical protein
2533 CP041727.1 GCA_008728795.1_02533 CDS open 2562526-2562978 453_na     150_aa moaE Molybdopterin synthase catalytic subunit
2534 CP041727.1 GCA_008728795.1_02534 CDS open 2562978-2563211 234_na     77_aa moaD Molybdopterin synthase sulfur carrier subunit
2535 CP041727.1 GCA_008728795.1_02535 CDS open 2563220-2563822 603_na     200_aa mobA putative molybdenum cofactor guanylyltransferase
2536 CP041727.1 GCA_008728795.1_02536 CDS open 2563840-2564862 1023_na     340_aa moaA GTP 3%2C8-cyclase
2537 CP041727.1 GCA_008728795.1_02537 CDS open 2565293-2565643 351_na     116_aa sarV HTH-type transcriptional regulator SarV
2538 CP041727.1 GCA_008728795.1_02538 CDS open 2565832-2567037 1206_na     401_aa yhhS putative MFS-type transporter YhhS
2539 CP041727.1 GCA_008728795.1_02539 CDS open 2567034-2567468 435_na     144_aa putative HTH-type transcriptional regulator
2540 CP041727.1 GCA_008728795.1_02540 CDS open 2567630-2568406 777_na     258_aa hypothetical protein
2541 CP041727.1 GCA_008728795.1_02541 CDS open 2568498-2569748 1251_na     416_aa femX Lipid II:glycine glycyltransferase
2542 CP041727.1 GCA_008728795.1_02542 CDS open 2569848-2573033 3186_na     1061_aa swrC Swarming motility protein SwrC
2543 CP041727.1 GCA_008728795.1_02543 CDS open 2573113-2573430 318_na     105_aa hypothetical protein
2544 CP041727.1 GCA_008728795.1_02544 CDS open 2573796-2574707 912_na     303_aa hypothetical protein
2545 CP041727.1 GCA_008728795.1_02545 CDS open 2574913-2575797 885_na     294_aa hypothetical protein
2546 CP041727.1 GCA_008728795.1_02546 CDS open 2575948-2578083 2136_na     711_aa topB DNA topoisomerase 3
2547 CP041727.1 GCA_008728795.1_02547 CDS open 2578195-2579529 1335_na     444_aa pbuG Guaninehypoxanthine permease PbuG
2548 CP041727.1 GCA_008728795.1_02548 CDS open 2579705-2580100 396_na     131_aa hypothetical protein
2549 CP041727.1 GCA_008728795.1_02549 CDS open 2580453-2580761 309_na     102_aa rpsJ 30S ribosomal protein S10
2550 CP041727.1 GCA_008728795.1_02550 CDS open 2580789-2581451 663_na     220_aa rplC 50S ribosomal protein L3
2551 CP041727.1 GCA_008728795.1_02551 CDS open 2581480-2582103 624_na     207_aa rplD 50S ribosomal protein L4
2552 CP041727.1 GCA_008728795.1_02552 CDS open 2582103-2582378 276_na     91_aa rplW 50S ribosomal protein L23
2553 CP041727.1 GCA_008728795.1_02553 CDS open 2582410-2583243 834_na     277_aa rplB 50S ribosomal protein L2
2554 CP041727.1 GCA_008728795.1_02554 CDS open 2583310-2583588 279_na     92_aa rpsS 30S ribosomal protein S19
2555 CP041727.1 GCA_008728795.1_02555 CDS open 2583616-2583969 354_na     117_aa rplV 50S ribosomal protein L22
2556 CP041727.1 GCA_008728795.1_02556 CDS open 2583993-2584646 654_na     217_aa rpsC 30S ribosomal protein S3
2557 CP041727.1 GCA_008728795.1_02557 CDS open 2584649-2585083 435_na     144_aa rplP 50S ribosomal protein L16
2558 CP041727.1 GCA_008728795.1_02558 CDS open 2585073-2585282 210_na     69_aa rpmC 50S ribosomal protein L29
2559 CP041727.1 GCA_008728795.1_02559 CDS open 2585300-2585563 264_na     87_aa rpsQ 30S ribosomal protein S17
2560 CP041727.1 GCA_008728795.1_02560 CDS open 2585595-2585963 369_na     122_aa rplN 50S ribosomal protein L14
2561 CP041727.1 GCA_008728795.1_02561 CDS open 2586000-2586317 318_na     105_aa rplX 50S ribosomal protein L24
2562 CP041727.1 GCA_008728795.1_02562 CDS open 2586343-2586882 540_na     179_aa rplE 50S ribosomal protein L5
2563 CP041727.1 GCA_008728795.1_02563 CDS open 2586907-2587092 186_na     61_aa rpsZ 30S ribosomal protein S14 type Z
2564 CP041727.1 GCA_008728795.1_02564 CDS open 2587124-2587522 399_na     132_aa rpsH 30S ribosomal protein S8
2565 CP041727.1 GCA_008728795.1_02565 CDS open 2587547-2588083 537_na     178_aa rplF 50S ribosomal protein L6
2566 CP041727.1 GCA_008728795.1_02566 CDS open 2588115-2588477 363_na     120_aa rplR 50S ribosomal protein L18
2567 CP041727.1 GCA_008728795.1_02567 CDS open 2588498-2588998 501_na     166_aa rpsE 30S ribosomal protein S5
2568 CP041727.1 GCA_008728795.1_02568 CDS open 2589015-2589194 180_na     59_aa rpmD 50S ribosomal protein L30
2569 CP041727.1 GCA_008728795.1_02569 CDS open 2589214-2589654 441_na     146_aa rplO 50S ribosomal protein L15
2570 CP041727.1 GCA_008728795.1_02570 CDS open 2589654-2590946 1293_na     430_aa secY Protein translocase subunit SecY
2571 CP041727.1 GCA_008728795.1_02571 CDS open 2590964-2591614 651_na     216_aa adk Adenylate kinase
2572 CP041727.1 GCA_008728795.1_02572 CDS open 2591808-2592026 219_na     72_aa infA Translation initiation factor IF-1
2573 CP041727.1 GCA_008728795.1_02573 CDS open 2592058-2592171 114_na     37_aa rpmJ 50S ribosomal protein L36
2574 CP041727.1 GCA_008728795.1_02574 CDS open 2592195-2592560 366_na     121_aa rpsM 30S ribosomal protein S13
2575 CP041727.1 GCA_008728795.1_02575 CDS open 2592583-2592972 390_na     129_aa rpsK 30S ribosomal protein S11
2576 CP041727.1 GCA_008728795.1_02576 CDS open 2593060-2594004 945_na     314_aa rpoA DNA-directed RNA polymerase subunit alpha
2577 CP041727.1 GCA_008728795.1_02577 CDS open 2594021-2594389 369_na     122_aa rplQ 50S ribosomal protein L17
2578 CP041727.1 GCA_008728795.1_02578 CDS open 2594747-2595556 810_na     269_aa ecfA1 Energy-coupling factor transporter ATP-binding protein EcfA1
2579 CP041727.1 GCA_008728795.1_02579 CDS open 2595553-2596410 858_na     285_aa ecfA2 Energy-coupling factor transporter ATP-binding protein EcfA2
2580 CP041727.1 GCA_008728795.1_02580 CDS open 2596407-2597213 807_na     268_aa ecfT_3 Energy-coupling factor transporter transmembrane protein EcfT
2581 CP041727.1 GCA_008728795.1_02581 CDS open 2597218-2598021 804_na     267_aa truA tRNA pseudouridine synthase A
2582 CP041727.1 misc_RNA open 2598064-2598133 L13_leader
2583 CP041727.1 GCA_008728795.1_02583 CDS open 2598287-2598724 438_na     145_aa rplM 50S ribosomal protein L13
2584 CP041727.1 GCA_008728795.1_02584 CDS open 2598744-2599136 393_na     130_aa rpsI 30S ribosomal protein S9
2585 CP041727.1 GCA_008728795.1_02585 CDS open 2599517-2600026 510_na     169_aa hypothetical protein
2586 CP041727.1 GCA_008728795.1_02586 CDS open 2600117-2600356 240_na     79_aa hypothetical protein
2587 CP041727.1 GCA_008728795.1_02587 CDS open 2600343-2601233 891_na     296_aa btuD_6 Vitamin B12 import ATP-binding protein BtuD
2588 CP041727.1 GCA_008728795.1_02588 CDS open 2601230-2601994 765_na     254_aa hypothetical protein
2589 CP041727.1 GCA_008728795.1_02589 CDS open 2602007-2602720 714_na     237_aa ecsA_2 ABC-type transporter ATP-binding protein EcsA
2590 CP041727.1 GCA_008728795.1_02590 CDS open 2602713-2604254 1542_na     513_aa hypothetical protein
2591 CP041727.1 GCA_008728795.1_02591 CDS open 2604499-2605071 573_na     190_aa hypothetical protein
2592 CP041727.1 GCA_008728795.1_02592 CDS open 2605097-2612221 7125_na     2374_aa lgrB Linear gramicidin synthase subunit B
2593 CP041727.1 GCA_008728795.1_02593 CDS open 2612211-2616431 4221_na     1406_aa tycB_2 Tyrocidine synthase 2
2594 CP041727.1 GCA_008728795.1_02594 CDS open 2616449-2625262 8814_na     2937_aa dltA_3 D-alanine--D-alanyl carrier protein ligase
2595 CP041727.1 GCA_008728795.1_02595 CDS open 2625259-2625945 687_na     228_aa lgrE_2 Linear gramicidin dehydrogenase LgrE
2596 CP041727.1 GCA_008728795.1_02596 CDS open 2625983-2627722 1740_na     579_aa angR_2 Anguibactin system regulator
2597 CP041727.1 GCA_008728795.1_02597 CDS open 2627730-2628383 654_na     217_aa hypothetical protein
2598 CP041727.1 GCA_008728795.1_02598 CDS open 2629636-2630295 660_na     219_aa lsrG_2 (4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase
2599 CP041727.1 GCA_008728795.1_02599 CDS open 2630593-2631327 735_na     244_aa cobB_2 NAD-dependent protein deacetylase
2600 CP041727.1 GCA_008728795.1_02600 CDS open 2631528-2632283 756_na     251_aa lacR_2 Lactose phosphotransferase system repressor
2601 CP041727.1 GCA_008728795.1_02601 CDS open 2632514-2632942 429_na     142_aa lacA_2 Galactose-6-phosphate isomerase subunit LacA
2602 CP041727.1 GCA_008728795.1_02602 CDS open 2632958-2633473 516_na     171_aa lacB_2 Galactose-6-phosphate isomerase subunit LacB
2603 CP041727.1 GCA_008728795.1_02603 CDS open 2633486-2634421 936_na     311_aa lacC_3 Tagatose-6-phosphate kinase
2604 CP041727.1 GCA_008728795.1_02604 CDS open 2634425-2635399 975_na     324_aa lacD_2 Tagatose 1%2C6-diphosphate aldolase
2605 CP041727.1 GCA_008728795.1_02605 CDS open 2635419-2635730 312_na     103_aa lacF_2 PTS system lactose-specific EIIA component
2606 CP041727.1 GCA_008728795.1_02606 CDS open 2635739-2636620 882_na     293_aa lacE_3 PTS system lactose-specific EIICB component
2607 CP041727.1 GCA_008728795.1_02607 CDS open 2636639-2638021 1383_na     460_aa hypothetical protein
2608 CP041727.1 GCA_008728795.1_02608 CDS open 2638078-2639001 924_na     307_aa hypothetical protein
2609 CP041727.1 GCA_008728795.1_02609 CDS open 2639057-2639668 612_na     203_aa lexA_3 LexA repressor
2610 CP041727.1 GCA_008728795.1_02610 CDS open 2639840-2640067 228_na     75_aa hypothetical protein
2611 CP041727.1 GCA_008728795.1_02611 CDS open 2640095-2641048 954_na     317_aa hypothetical protein
2612 CP041727.1 GCA_008728795.1_02612 CDS open 2641045-2641812 768_na     255_aa hypothetical protein
2613 CP041727.1 GCA_008728795.1_02613 CDS open 2641881-2642192 312_na     103_aa hypothetical protein
2614 CP041727.1 GCA_008728795.1_02614 CDS open 2642140-2642523 384_na     127_aa hypothetical protein
2615 CP041727.1 GCA_008728795.1_02615 CDS open 2642581-2643333 753_na     250_aa hypothetical protein
2616 CP041727.1 GCA_008728795.1_02616 CDS open 2643349-2643492 144_na     47_aa hypothetical protein
2617 CP041727.1 GCA_008728795.1_02617 CDS open 2643502-2644104 603_na     200_aa hypothetical protein
2618 CP041727.1 GCA_008728795.1_02618 CDS open 2644164-2644268 105_na     34_aa hypothetical protein
2619 CP041727.1 GCA_008728795.1_02619 CDS open 2644331-2644510 180_na     59_aa hypothetical protein
2620 CP041727.1 GCA_008728795.1_02620 CDS open 2644579-2645064 486_na     161_aa hypothetical protein
2621 CP041727.1 GCA_008728795.1_02621 CDS open 2645065-2645319 255_na     84_aa hypothetical protein
2622 CP041727.1 GCA_008728795.1_02622 CDS open 2645322-2645738 417_na     138_aa hypothetical protein
2623 CP041727.1 GCA_008728795.1_02623 CDS open 2646246-2646452 207_na     68_aa hypothetical protein
2624 CP041727.1 GCA_008728795.1_02624 CDS open 2646442-2646912 471_na     156_aa hypothetical protein