HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Fusobacterium necrophorum (GCA_008801775.1)

Select a Genome:
PROKKA Annotations for GCA_008801775.1
Genome Selected: Fusobacterium necrophorum
ContigsBases CDSrRNA tmRNAtRNA
26 2124940 2021 7 1 50
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 2097 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2097 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 VZOZ01000013.1 GCA_008801775.1_02001 CDS open 269-1111 843_na     280_aa hypothetical protein
2002 VZOZ01000013.1 GCA_008801775.1_02002 CDS open 1228-2004 777_na     258_aa opuBA_2 Choline transport ATP-binding protein OpuBA
2003 VZOZ01000013.1 GCA_008801775.1_02003 CDS open 2012-2842 831_na     276_aa hypothetical protein
2004 VZOZ01000013.1 GCA_008801775.1_02004 CDS open 2864-3790 927_na     308_aa hypothetical protein
2005 VZOZ01000013.1 GCA_008801775.1_02005 CDS open 3950-4543 594_na     197_aa recR Recombination protein RecR
2006 VZOZ01000013.1 GCA_008801775.1_02006 CDS open 4545-4847 303_na     100_aa hypothetical protein
2007 VZOZ01000013.1 GCA_008801775.1_02007 CDS open 4866-5837 972_na     323_aa pfkA ATP-dependent 6-phosphofructokinase
2008 VZOZ01000013.1 GCA_008801775.1_02008 CDS open 5842-6798 957_na     318_aa accA Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
2009 VZOZ01000013.1 GCA_008801775.1_02009 CDS open 6788-7705 918_na     305_aa accD Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
2010 VZOZ01000013.1 GCA_008801775.1_02010 CDS open 7879-8406 528_na     175_aa hypothetical protein
2011 VZOZ01000013.1 GCA_008801775.1_02011 CDS open 8474-8884 411_na     136_aa nsrR HTH-type transcriptional repressor NsrR
2012 VZOZ01000013.1 GCA_008801775.1_02012 CDS open 8915-9823 909_na     302_aa hypothetical protein
2013 VZOZ01000013.1 GCA_008801775.1_02013 CDS open 9842-11359 1518_na     505_aa hypothetical protein
2014 VZOZ01000013.1 GCA_008801775.1_02014 CDS open 11364-13136 1773_na     590_aa uvrC UvrABC system protein C
2015 VZOZ01000013.1 GCA_008801775.1_02015 CDS open 13123-13974 852_na     283_aa Nucleotide-binding protein
2016 VZOZ01000013.1 tRNA open 14127-14202 tRNA-Gly(tcc)
2017 VZOZ01000013.1 tRNA open 14214-14290 tRNA-Ala(tgc)
2018 VZOZ01000013.1 tRNA open 14295-14371 tRNA-Met(cat)
2019 VZOZ01000013.1 GCA_008801775.1_02019 CDS open 14470-14919 450_na     149_aa dps1 DNA protection during starvation protein 1
2020 VZOZ01000013.1 GCA_008801775.1_02020 CDS open 15090-15806 717_na     238_aa hypothetical protein
2021 VZOZ01000013.1 GCA_008801775.1_02021 CDS open 15772-16515 744_na     247_aa hypothetical protein
2022 VZOZ01000013.1 GCA_008801775.1_02022 CDS open 16512-17594 1083_na     360_aa alr1_2 Alanine racemase 1
2023 VZOZ01000013.1 GCA_008801775.1_02023 CDS open 17717-19201 1485_na     494_aa glcB PTS system glucoside-specific EIICBA component
2024 VZOZ01000013.1 GCA_008801775.1_02024 CDS open 19332-20204 873_na     290_aa hypothetical protein
2025 VZOZ01000013.1 GCA_008801775.1_02025 CDS open 20521-22434 1914_na     637_aa hprK HPr kinasephosphorylase
2026 VZOZ01000013.1 GCA_008801775.1_02026 CDS open 22451-23086 636_na     211_aa hypothetical protein
2027 VZOZ01000013.1 GCA_008801775.1_02027 CDS open 23073-24302 1230_na     409_aa folC Dihydrofolate synthasefolylpolyglutamate synthase
2028 VZOZ01000013.1 GCA_008801775.1_02028 CDS open 24299-25015 717_na     238_aa mtnN_2 5-methylthioadenosineS-adenosylhomocysteine nucleosidase
2029 VZOZ01000013.1 GCA_008801775.1_02029 CDS open 25152-26069 918_na     305_aa lpxL Lipid A biosynthesis lauroyltransferase
2030 VZOZ01000013.1 GCA_008801775.1_02030 CDS open 26092-26925 834_na     277_aa hbd 3-hydroxybutyryl-CoA dehydrogenase
2031 VZOZ01000013.1 GCA_008801775.1_02031 CDS open 26960-27736 777_na     258_aa crt_2 Short-chain-enoyl-CoA hydratase
2032 VZOZ01000013.1 GCA_008801775.1_02032 CDS open 27774-28598 825_na     274_aa apbC Iron-sulfur cluster carrier protein
2033 VZOZ01000013.1 GCA_008801775.1_02033 CDS open 28675-29565 891_na     296_aa era GTPase Era
2034 VZOZ01000013.1 GCA_008801775.1_02034 CDS open 29566-30279 714_na     237_aa xerC_6 Tyrosine recombinase XerC
2035 VZOZ01000013.1 GCA_008801775.1_02035 CDS open 30276-31943 1668_na     555_aa recN DNA repair protein RecN
2036 VZOZ01000013.1 GCA_008801775.1_02036 CDS open 31937-32737 801_na     266_aa nadK NAD kinase
2037 VZOZ01000013.1 GCA_008801775.1_02037 CDS open 32759-33862 1104_na     367_aa envC Murein hydrolase activator EnvC
2038 VZOZ01000013.1 GCA_008801775.1_02038 CDS open 33859-34704 846_na     281_aa hypothetical protein
2039 VZOZ01000013.1 GCA_008801775.1_02039 CDS open 34824-35753 930_na     309_aa aptB Apulose-4-phosphate transketolase subunit B
2040 VZOZ01000013.1 GCA_008801775.1_02040 CDS open 35774-36586 813_na     270_aa aptA Apulose-4-phosphate transketolase subunit A
2041 VZOZ01000013.1 GCA_008801775.1_02041 CDS open 36630-37151 522_na     173_aa hypothetical protein
2042 VZOZ01000013.1 GCA_008801775.1_02042 CDS open 37148-37717 570_na     189_aa maf dTTPUTP pyrophosphatase
2043 VZOZ01000013.1 tRNA open 37788-37863 tRNA-Asn(gtt)
2044 VZOZ01000013.1 rRNA open 37888-37990 5S ribosomal RNA
2045 VZOZ01000014.1 GCA_008801775.1_02045 CDS open 338-592 255_na     84_aa minE Cell division topological specificity factor
2046 VZOZ01000014.1 GCA_008801775.1_02046 CDS open 599-1390 792_na     263_aa minD Septum site-determining protein MinD
2047 VZOZ01000014.1 GCA_008801775.1_02047 CDS open 1392-2033 642_na     213_aa minC Septum site-determining protein MinC
2048 VZOZ01000014.1 GCA_008801775.1_02048 CDS open 2166-2462 297_na     98_aa hypothetical protein
2049 VZOZ01000014.1 GCA_008801775.1_02049 CDS open 2485-3237 753_na     250_aa hypothetical protein
2050 VZOZ01000014.1 GCA_008801775.1_02050 CDS open 3249-5435 2187_na     728_aa ctpC Manganese-exporting P-type ATPase
2051 VZOZ01000014.1 GCA_008801775.1_02051 CDS open 5436-5825 390_na     129_aa hypothetical protein
2052 VZOZ01000014.1 GCA_008801775.1_02052 CDS open 5828-6310 483_na     160_aa hypothetical protein
2053 VZOZ01000014.1 GCA_008801775.1_02053 CDS open 6407-7012 606_na     201_aa hypothetical protein
2054 VZOZ01000014.1 GCA_008801775.1_02054 CDS open 7102-8442 1341_na     446_aa putative NADH oxidase
2055 VZOZ01000014.1 GCA_008801775.1_02055 CDS open 8759-8959 201_na     66_aa cspLA Cold shock-like protein CspLA
2056 VZOZ01000014.1 GCA_008801775.1_02056 CDS open 9038-10345 1308_na     435_aa mepA_4 Multidrug export protein MepA
2057 VZOZ01000014.1 GCA_008801775.1_02057 CDS open 10338-11123 786_na     261_aa ybjI 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YbjI
2058 VZOZ01000014.1 GCA_008801775.1_02058 CDS open 11289-12437 1149_na     382_aa braC Leucine-%2C isoleucine-%2C valine-%2C threonine-%2C and alanine-binding protein
2059 VZOZ01000014.1 GCA_008801775.1_02059 CDS open 12463-13347 885_na     294_aa livH High-affinity branched-chain amino acid transport system permease protein LivH
2060 VZOZ01000014.1 GCA_008801775.1_02060 CDS open 13351-14322 972_na     323_aa hypothetical protein
2061 VZOZ01000014.1 GCA_008801775.1_02061 CDS open 14325-15119 795_na     264_aa lptB_2 Lipopolysaccharide export system ATP-binding protein LptB
2062 VZOZ01000014.1 GCA_008801775.1_02062 CDS open 15138-15854 717_na     238_aa livF High-affinity branched-chain amino acid transport ATP-binding protein LivF
2063 VZOZ01000014.1 GCA_008801775.1_02063 CDS open 15938-17284 1347_na     448_aa hypothetical protein
2064 VZOZ01000014.1 GCA_008801775.1_02064 CDS open 17300-18496 1197_na     398_aa patB_2 Cystathionine beta-lyase PatB
2065 VZOZ01000014.1 GCA_008801775.1_02065 CDS open 18679-18957 279_na     92_aa bcd_3 Acyl-CoA dehydrogenase%2C short-chain specific
2066 VZOZ01000015.1 GCA_008801775.1_02066 CDS open 408-1028 621_na     206_aa hypothetical protein
2067 VZOZ01000015.1 GCA_008801775.1_02067 CDS open 1025-1183 159_na     52_aa hypothetical protein
2068 VZOZ01000015.1 GCA_008801775.1_02068 CDS open 1183-2658 1476_na     491_aa hypothetical protein
2069 VZOZ01000015.1 GCA_008801775.1_02069 CDS open 2655-3830 1176_na     391_aa gspF Putative type II secretion system protein F
2070 VZOZ01000015.1 GCA_008801775.1_02070 CDS open 3840-4313 474_na     157_aa hypothetical protein
2071 VZOZ01000015.1 GCA_008801775.1_02071 CDS open 4298-4741 444_na     147_aa hypothetical protein
2072 VZOZ01000015.1 GCA_008801775.1_02072 CDS open 4738-5130 393_na     130_aa hypothetical protein
2073 VZOZ01000015.1 GCA_008801775.1_02073 CDS open 5111-5677 567_na     188_aa hypothetical protein
2074 VZOZ01000015.1 GCA_008801775.1_02074 CDS open 5691-6167 477_na     158_aa hypothetical protein
2075 VZOZ01000015.1 GCA_008801775.1_02075 CDS open 6164-7303 1140_na     379_aa hypothetical protein
2076 VZOZ01000015.1 GCA_008801775.1_02076 CDS open 7281-7874 594_na     197_aa hypothetical protein
2077 VZOZ01000015.1 GCA_008801775.1_02077 CDS open 7843-9102 1260_na     419_aa sctC Type 3 secretion system secretin
2078 VZOZ01000015.1 GCA_008801775.1_02078 CDS open 9157-9738 582_na     193_aa hypothetical protein
2079 VZOZ01000015.1 GCA_008801775.1_02079 CDS open 9785-10234 450_na     149_aa msrC Free methionine-R-sulfoxide reductase
2080 VZOZ01000016.1 rRNA open 2-2815 23S ribosomal RNA
2081 VZOZ01000017.1 tRNA open 219-303 tRNA-Tyr(gta)
2082 VZOZ01000017.1 tRNA open 321-395 tRNA-Glu(ttc)
2083 VZOZ01000017.1 tRNA open 400-475 tRNA-Thr(tgt)
2084 VZOZ01000017.1 GCA_008801775.1_02084 CDS open 581-1405 825_na     274_aa moaA GTP 3%2C8-cyclase
2085 VZOZ01000017.1 GCA_008801775.1_02085 CDS open 1434-2126 693_na     230_aa gpmA 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
2086 VZOZ01000017.1 tRNA open 2240-2313 tRNA-Cys(gca)
2087 VZOZ01000017.1 tRNA open 2328-2403 tRNA-Phe(gaa)
2088 VZOZ01000017.1 tRNA open 2408-2485 tRNA-Asp(gtc)
2089 VZOZ01000018.1 GCA_008801775.1_02089 CDS open 35-292 258_na     85_aa hypothetical protein
2090 VZOZ01000018.1 GCA_008801775.1_02090 CDS open 302-772 471_na     156_aa hypothetical protein
2091 VZOZ01000018.1 GCA_008801775.1_02091 CDS open 769-1281 513_na     170_aa hypothetical protein
2092 VZOZ01000018.1 GCA_008801775.1_02092 CDS open 1335-1865 531_na     176_aa hypothetical protein
2093 VZOZ01000018.1 GCA_008801775.1_02093 CDS open 1880-2143 264_na     87_aa hypothetical protein
2094 VZOZ01000019.1 rRNA open 25-1528 16S ribosomal RNA
2095 VZOZ01000020.1 GCA_008801775.1_02095 CDS open 290-1474 1185_na     394_aa tufA Elongation factor Tu
2096 VZOZ01000024.1 tRNA open 141-217 tRNA-Ile(gat)
2097 VZOZ01000024.1 tRNA open 223-299 tRNA-Ala(tgc)