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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_011403135.1)

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PROKKA Annotations for GCA_011403135.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
1 2687768 2488 19 1 61
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Annotation Table [page:6]    |    Number of Records Found: 2660 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 AP021848.1 GCA_011403135.1_02501 CDS open 2528678-2529055 378_na     125_aa yabJ 2-iminobutanoate2-iminopropanoate deaminase
2502 AP021848.1 GCA_011403135.1_02502 CDS open 2529072-2529896 825_na     274_aa purR_2 Pur operon repressor
2503 AP021848.1 GCA_011403135.1_02503 CDS open 2529910-2530758 849_na     282_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2504 AP021848.1 GCA_011403135.1_02504 CDS open 2530994-2531257 264_na     87_aa veg Protein Veg
2505 AP021848.1 GCA_011403135.1_02505 CDS open 2531357-2532247 891_na     296_aa rsmA Ribosomal RNA small subunit methyltransferase A
2506 AP021848.1 GCA_011403135.1_02506 CDS open 2532247-2532798 552_na     183_aa rnmV_2 Ribonuclease M5
2507 AP021848.1 GCA_011403135.1_02507 CDS open 2532938-2533708 771_na     256_aa dtd3 D-aminoacyl-tRNA deacylase
2508 AP021848.1 GCA_011403135.1_02508 CDS open 2533734-2535707 1974_na     657_aa metG Methionine--tRNA ligase
2509 AP021848.1 GCA_011403135.1_02509 CDS open 2535936-2536781 846_na     281_aa rsmI Ribosomal RNA small subunit methyltransferase I
2510 AP021848.1 GCA_011403135.1_02510 CDS open 2536783-2537031 249_na     82_aa hypothetical protein
2511 AP021848.1 GCA_011403135.1_02511 CDS open 2537024-2537749 726_na     241_aa yfiC tRNA1(Val) (adenine(37)-N6)-methyltransferase
2512 AP021848.1 GCA_011403135.1_02512 CDS open 2537844-2538191 348_na     115_aa yabA Initiation-control protein YabA
2513 AP021848.1 GCA_011403135.1_02513 CDS open 2538208-2539011 804_na     267_aa hypothetical protein
2514 AP021848.1 GCA_011403135.1_02514 CDS open 2539012-2539938 927_na     308_aa hypothetical protein
2515 AP021848.1 GCA_011403135.1_02515 CDS open 2540235-2540564 330_na     109_aa darA Cyclic di-AMP receptor A
2516 AP021848.1 GCA_011403135.1_02516 CDS open 2540592-2541209 618_na     205_aa tmk Thymidylate kinase
2517 AP021848.1 GCA_011403135.1_02517 CDS open 2541213-2542556 1344_na     447_aa speA Arginine decarboxylase
2518 AP021848.1 GCA_011403135.1_02518 CDS open 2542582-2543109 528_na     175_aa speG Spermidine N(1)-acetyltransferase
2519 AP021848.1 misc_RNA open 2543342-2543573 S35
2520 AP021848.1 GCA_011403135.1_02520 CDS open 2543653-2545251 1599_na     532_aa hypothetical protein
2521 AP021848.1 GCA_011403135.1_02521 CDS open 2545273-2549634 4362_na     1453_aa hypothetical protein
2522 AP021848.1 rRNA open 2549923-2550031 5S ribosomal RNA
2523 AP021848.1 rRNA open 2550103-2553020 23S ribosomal RNA
2524 AP021848.1 rRNA open 2553515-2555062 16S ribosomal RNA
2525 AP021848.1 GCA_011403135.1_02525 CDS open 2555585-2556181 597_na     198_aa recR Recombination protein RecR
2526 AP021848.1 GCA_011403135.1_02526 CDS open 2556188-2556505 318_na     105_aa Nucleoid-associated protein
2527 AP021848.1 GCA_011403135.1_02527 CDS open 2556593-2558323 1731_na     576_aa ruvB_3 Holliday junction ATP-dependent DNA helicase RuvB
2528 AP021848.1 GCA_011403135.1_02528 CDS open 2558389-2558913 525_na     174_aa hypothetical protein
2529 AP021848.1 misc_RNA open 2559241-2559510 Bacteria_large_SRP
2530 AP021848.1 GCA_011403135.1_02530 CDS open 2559598-2560335 738_na     245_aa treR_2 HTH-type transcriptional regulator TreR
2531 AP021848.1 GCA_011403135.1_02531 CDS open 2560347-2561984 1638_na     545_aa treA Trehalose-6-phosphate hydrolase
2532 AP021848.1 GCA_011403135.1_02532 CDS open 2562062-2563507 1446_na     481_aa treP_2 PTS system trehalose-specific EIIBC component
2533 AP021848.1 tRNA open 2563800-2563892 tRNA-Ser(tga)
2534 AP021848.1 GCA_011403135.1_02534 CDS open 2563940-2565415 1476_na     491_aa gltB Glutamate synthase [NADPH] small chain
2535 AP021848.1 GCA_011403135.1_02535 CDS open 2565433-2569929 4497_na     1498_aa gltA Glutamate synthase [NADPH] large chain
2536 AP021848.1 GCA_011403135.1_02536 CDS open 2570073-2570957 885_na     294_aa hdfR HTH-type transcriptional regulator HdfR
2537 AP021848.1 GCA_011403135.1_02537 CDS open 2571053-2572168 1116_na     371_aa hypothetical protein
2538 AP021848.1 GCA_011403135.1_02538 CDS open 2572165-2572947 783_na     260_aa hypothetical protein
2539 AP021848.1 GCA_011403135.1_02539 CDS open 2573280-2573666 387_na     128_aa hypothetical protein
2540 AP021848.1 GCA_011403135.1_02540 CDS open 2573795-2574064 270_na     89_aa hypothetical protein
2541 AP021848.1 GCA_011403135.1_02541 CDS open 2574270-2575241 972_na     323_aa sle1 N-acetylmuramoyl-L-alanine amidase sle1
2542 AP021848.1 misc_RNA open 2575645-2575819 S35
2543 AP021848.1 GCA_011403135.1_02543 CDS open 2576095-2576934 840_na     279_aa metQ_3 putative D-methionine-binding lipoprotein MetQ
2544 AP021848.1 GCA_011403135.1_02544 CDS open 2576966-2577625 660_na     219_aa metP_2 Methionine import system permease protein MetP
2545 AP021848.1 GCA_011403135.1_02545 CDS open 2577628-2578650 1023_na     340_aa metN Methionine import ATP-binding protein MetN
2546 AP021848.1 GCA_011403135.1_02546 CDS open 2578855-2580597 1743_na     580_aa Putative multidrug export ATP-bindingpermease protein
2547 AP021848.1 GCA_011403135.1_02547 CDS open 2580594-2582375 1782_na     593_aa irtA_2 Iron import ATP-bindingpermease protein IrtA
2548 AP021848.1 GCA_011403135.1_02548 CDS open 2582659-2583804 1146_na     381_aa mccB Cystathionine gamma-lyase
2549 AP021848.1 GCA_011403135.1_02549 CDS open 2583811-2584755 945_na     314_aa mccA O-acetylserine dependent cystathionine beta-synthase
2550 AP021848.1 GCA_011403135.1_02550 CDS open 2585086-2585526 441_na     146_aa hypothetical protein
2551 AP021848.1 GCA_011403135.1_02551 CDS open 2585633-2586964 1332_na     443_aa hypothetical protein
2552 AP021848.1 GCA_011403135.1_02552 CDS open 2587107-2587361 255_na     84_aa hypothetical protein
2553 AP021848.1 GCA_011403135.1_02553 CDS open 2587391-2588119 729_na     242_aa est_2 Carboxylesterase
2554 AP021848.1 GCA_011403135.1_02554 CDS open 2588160-2588828 669_na     222_aa hypothetical protein
2555 AP021848.1 GCA_011403135.1_02555 CDS open 2589011-2589373 363_na     120_aa hypothetical protein
2556 AP021848.1 GCA_011403135.1_02556 CDS open 2589494-2592064 2571_na     856_aa hypothetical protein
2557 AP021848.1 GCA_011403135.1_02557 CDS open 2592079-2593578 1500_na     499_aa ndhB NAD(P)H-quinone oxidoreductase subunit 2%2C chloroplastic
2558 AP021848.1 GCA_011403135.1_02558 CDS open 2594309-2594575 267_na     88_aa hypothetical protein
2559 AP021848.1 GCA_011403135.1_02559 CDS open 2594635-2595828 1194_na     397_aa yciC Putative metal chaperone YciC
2560 AP021848.1 GCA_011403135.1_02560 CDS open 2595924-2596742 819_na     272_aa attM N-acyl homoserine lactonase AttM
2561 AP021848.1 GCA_011403135.1_02561 CDS open 2596760-2597185 426_na     141_aa hypothetical protein
2562 AP021848.1 GCA_011403135.1_02562 CDS open 2597291-2598157 867_na     288_aa hypothetical protein
2563 AP021848.1 GCA_011403135.1_02563 CDS open 2598374-2599915 1542_na     513_aa guaA GMP synthase [glutamine-hydrolyzing]
2564 AP021848.1 GCA_011403135.1_02564 CDS open 2600044-2601510 1467_na     488_aa guaB Inosine-5-monophosphate dehydrogenase
2565 AP021848.1 GCA_011403135.1_02565 CDS open 2601547-2602815 1269_na     422_aa pucK Uric acid permease PucK
2566 AP021848.1 GCA_011403135.1_02566 CDS open 2602812-2603393 582_na     193_aa xpt Xanthine phosphoribosyltransferase
2567 AP021848.1 misc_RNA open 2603608-2603710 Purine
2568 AP021848.1 GCA_011403135.1_02568 CDS open 2603927-2604334 408_na     135_aa hypothetical protein
2569 AP021848.1 GCA_011403135.1_02569 CDS open 2604480-2605151 672_na     223_aa hypothetical protein
2570 AP021848.1 GCA_011403135.1_02570 CDS open 2605268-2606278 1011_na     336_aa putative protein
2571 AP021848.1 GCA_011403135.1_02571 CDS open 2606898-2608286 1389_na     462_aa tcyP L-cystine uptake protein TcyP
2572 AP021848.1 GCA_011403135.1_02572 CDS open 2608470-2609225 756_na     251_aa nfrA NADPH-dependent oxidoreductase
2573 AP021848.1 GCA_011403135.1_02573 CDS open 2609391-2610170 780_na     259_aa hpcG 2-oxo-hept-4-ene-1%2C7-dioate hydratase
2574 AP021848.1 GCA_011403135.1_02574 CDS open 2610697-2611266 570_na     189_aa ahpC Alkyl hydroperoxide reductase C
2575 AP021848.1 GCA_011403135.1_02575 CDS open 2611284-2612807 1524_na     507_aa ahpF Alkyl hydroperoxide reductase subunit F
2576 AP021848.1 GCA_011403135.1_02576 CDS open 2613223-2613846 624_na     207_aa hypothetical protein
2577 AP021848.1 GCA_011403135.1_02577 CDS open 2614053-2614304 252_na     83_aa hypothetical protein
2578 AP021848.1 GCA_011403135.1_02578 CDS open 2614529-2615107 579_na     192_aa gpmA_2 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
2579 AP021848.1 GCA_011403135.1_02579 CDS open 2615577-2615825 249_na     82_aa hypothetical protein
2580 AP021848.1 GCA_011403135.1_02580 CDS open 2615977-2616207 231_na     76_aa hypothetical protein
2581 AP021848.1 GCA_011403135.1_02581 CDS open 2616446-2616703 258_na     85_aa hypothetical protein
2582 AP021848.1 GCA_011403135.1_02582 CDS open 2617186-2617350 165_na     54_aa hypothetical protein
2583 AP021848.1 GCA_011403135.1_02583 CDS open 2617694-2617891 198_na     65_aa hypothetical protein
2584 AP021848.1 GCA_011403135.1_02584 CDS open 2618174-2618380 207_na     68_aa hypothetical protein
2585 AP021848.1 GCA_011403135.1_02585 CDS open 2619675-2620022 348_na     115_aa cadC_2 Cadmium resistance transcriptional regulatory protein CadC
2586 AP021848.1 GCA_011403135.1_02586 CDS open 2620041-2620658 618_na     205_aa hypothetical protein
2587 AP021848.1 GCA_011403135.1_02587 CDS open 2620930-2621181 252_na     83_aa hypothetical protein
2588 AP021848.1 GCA_011403135.1_02588 CDS open 2621293-2621865 573_na     190_aa hypothetical protein
2589 AP021848.1 GCA_011403135.1_02589 CDS open 2621928-2622449 522_na     173_aa hypothetical protein
2590 AP021848.1 GCA_011403135.1_02590 CDS open 2622461-2622694 234_na     77_aa hypothetical protein
2591 AP021848.1 GCA_011403135.1_02591 CDS open 2622776-2623051 276_na     91_aa hypothetical protein
2592 AP021848.1 GCA_011403135.1_02592 CDS open 2623337-2623978 642_na     213_aa hypothetical protein
2593 AP021848.1 GCA_011403135.1_02593 CDS open 2623980-2624501 522_na     173_aa hypothetical protein
2594 AP021848.1 GCA_011403135.1_02594 CDS open 2624826-2626535 1710_na     569_aa hypothetical protein
2595 AP021848.1 GCA_011403135.1_02595 CDS open 2626549-2627466 918_na     305_aa hypothetical protein
2596 AP021848.1 GCA_011403135.1_02596 CDS open 2627512-2627814 303_na     100_aa hypothetical protein
2597 AP021848.1 GCA_011403135.1_02597 CDS open 2627814-2628233 420_na     139_aa hypothetical protein
2598 AP021848.1 GCA_011403135.1_02598 CDS open 2628223-2628381 159_na     52_aa hypothetical protein
2599 AP021848.1 GCA_011403135.1_02599 CDS open 2628398-2628670 273_na     90_aa hypothetical protein
2600 AP021848.1 GCA_011403135.1_02600 CDS open 2628671-2628892 222_na     73_aa hypothetical protein
2601 AP021848.1 GCA_011403135.1_02601 CDS open 2629064-2629636 573_na     190_aa hypothetical protein
2602 AP021848.1 GCA_011403135.1_02602 CDS open 2629663-2630355 693_na     230_aa hypothetical protein
2603 AP021848.1 GCA_011403135.1_02603 CDS open 2630392-2631612 1221_na     406_aa xerC_5 Tyrosine recombinase XerC
2604 AP021848.1 GCA_011403135.1_02604 CDS open 2631758-2632000 243_na     80_aa rpsR 30S ribosomal protein S18
2605 AP021848.1 GCA_011403135.1_02605 CDS open 2632047-2632556 510_na     169_aa ssbA Single-stranded DNA-binding protein A
2606 AP021848.1 GCA_011403135.1_02606 CDS open 2632578-2632874 297_na     98_aa rpsF 30S ribosomal protein S6
2607 AP021848.1 GCA_011403135.1_02607 CDS open 2633192-2633977 786_na     261_aa hypothetical protein
2608 AP021848.1 GCA_011403135.1_02608 CDS open 2634039-2634230 192_na     63_aa hypothetical protein
2609 AP021848.1 GCA_011403135.1_02609 CDS open 2634470-2635567 1098_na     365_aa ychF Ribosome-binding ATPase YchF
2610 AP021848.1 GCA_011403135.1_02610 CDS open 2635567-2635782 216_na     71_aa hypothetical protein
2611 AP021848.1 GCA_011403135.1_02611 CDS open 2635800-2636681 882_na     293_aa mscS Small-conductance mechanosensitive channel
2612 AP021848.1 GCA_011403135.1_02612 CDS open 2636890-2637717 828_na     275_aa spo0J Stage 0 sporulation protein J
2613 AP021848.1 misc_RNA open 2637990-2638382 T-box
2614 AP021848.1 GCA_011403135.1_02614 CDS open 2638451-2639545 1095_na     364_aa metI Cystathionine gamma-synthaseO-acetylhomoserine (thiol)-lyase
2615 AP021848.1 GCA_011403135.1_02615 CDS open 2639550-2640725 1176_na     391_aa metC Cystathionine beta-lyase MetC
2616 AP021848.1 GCA_011403135.1_02616 CDS open 2640679-2642517 1839_na     612_aa yitJ Bifunctional homocysteine S-methyltransferase5%2C10-methylenetetrahydrofolate reductase
2617 AP021848.1 GCA_011403135.1_02617 CDS open 2642514-2644742 2229_na     742_aa metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
2618 AP021848.1 GCA_011403135.1_02618 CDS open 2644967-2645710 744_na     247_aa Isatin hydrolase
2619 AP021848.1 GCA_011403135.1_02619 CDS open 2645937-2647052 1116_na     371_aa Putative flavoprotein monooxygenase
2620 AP021848.1 GCA_011403135.1_02620 CDS open 2647046-2648395 1350_na     449_aa hypothetical protein
2621 AP021848.1 GCA_011403135.1_02621 CDS open 2648411-2649298 888_na     295_aa hypothetical protein
2622 AP021848.1 GCA_011403135.1_02622 CDS open 2649370-2650566 1197_na     398_aa macB Macrolide export ATP-bindingpermease protein MacB
2623 AP021848.1 GCA_011403135.1_02623 CDS open 2650550-2651245 696_na     231_aa yknY putative ABC transporter ATP-binding protein YknY
2624 AP021848.1 GCA_011403135.1_02624 CDS open 2651242-2652363 1122_na     373_aa hypothetical protein
2625 AP021848.1 GCA_011403135.1_02625 CDS open 2652531-2652947 417_na     138_aa hypothetical protein
2626 AP021848.1 GCA_011403135.1_02626 CDS open 2653194-2653499 306_na     101_aa hypothetical protein
2627 AP021848.1 GCA_011403135.1_02627 CDS open 2653536-2654438 903_na     300_aa sasA_3 Adaptive-response sensory-kinase SasA
2628 AP021848.1 GCA_011403135.1_02628 CDS open 2654461-2655210 750_na     249_aa hypothetical protein
2629 AP021848.1 GCA_011403135.1_02629 CDS open 2655203-2656117 915_na     304_aa bcrA_4 Bacitracin transport ATP-binding protein BcrA
2630 AP021848.1 GCA_011403135.1_02630 CDS open 2656208-2656879 672_na     223_aa arlR_3 Response regulator ArlR
2631 AP021848.1 GCA_011403135.1_02631 CDS open 2657158-2658435 1278_na     425_aa cscB Sucrose permease
2632 AP021848.1 GCA_011403135.1_02632 CDS open 2658444-2659871 1428_na     475_aa sacA Sucrose-6-phosphate hydrolase
2633 AP021848.1 GCA_011403135.1_02633 CDS open 2660051-2661028 978_na     325_aa purR_3 HTH-type transcriptional repressor PurR
2634 AP021848.1 GCA_011403135.1_02634 CDS open 2661137-2661541 405_na     134_aa hypothetical protein
2635 AP021848.1 GCA_011403135.1_02635 CDS open 2661838-2662716 879_na     292_aa ywqG putative protein YwqG
2636 AP021848.1 GCA_011403135.1_02636 CDS open 2662961-2663524 564_na     187_aa ydaF Putative ribosomal N-acetyltransferase YdaF
2637 AP021848.1 GCA_011403135.1_02637 CDS open 2663564-2663656 93_na     30_aa hypothetical protein
2638 AP021848.1 GCA_011403135.1_02638 CDS open 2663869-2665224 1356_na     451_aa glpT Glycerol-3-phosphate transporter
2639 AP021848.1 GCA_011403135.1_02639 CDS open 2665437-2666234 798_na     265_aa hypothetical protein
2640 AP021848.1 GCA_011403135.1_02640 CDS open 2666307-2667479 1173_na     390_aa IS256 family transposase IS256
2641 AP021848.1 GCA_011403135.1_02641 CDS open 2667557-2668192 636_na     211_aa hypothetical protein
2642 AP021848.1 GCA_011403135.1_02642 CDS open 2668320-2668898 579_na     192_aa spsB_3 Signal peptidase IB
2643 AP021848.1 GCA_011403135.1_02643 CDS open 2669183-2669941 759_na     252_aa bceA_2 Bacitracin export ATP-binding protein BceA
2644 AP021848.1 GCA_011403135.1_02644 CDS open 2669931-2671817 1887_na     628_aa bceB_3 Bacitracin export permease protein BceB
2645 AP021848.1 GCA_011403135.1_02645 CDS open 2671842-2672039 198_na     65_aa hypothetical protein
2646 AP021848.1 GCA_011403135.1_02646 CDS open 2672104-2672676 573_na     190_aa hypothetical protein
2647 AP021848.1 GCA_011403135.1_02647 CDS open 2673079-2673984 906_na     301_aa htxB putative phosphite transport system-binding protein HtxB
2648 AP021848.1 GCA_011403135.1_02648 CDS open 2674236-2675018 783_na     260_aa golD NAD-dependent glycerol dehydrogenase
2649 AP021848.1 GCA_011403135.1_02649 CDS open 2675022-2676317 1296_na     431_aa csbX Alpha-ketoglutarate permease
2650 AP021848.1 GCA_011403135.1_02650 CDS open 2676353-2677954 1602_na     533_aa xylB_3 Xylulose kinase
2651 AP021848.1 GCA_011403135.1_02651 CDS open 2678384-2679463 1080_na     359_aa gutB Sorbitol dehydrogenase
2652 AP021848.1 GCA_011403135.1_02652 CDS open 2679766-2680311 546_na     181_aa hypothetical protein
2653 AP021848.1 GCA_011403135.1_02653 CDS open 2680277-2680672 396_na     131_aa hypothetical protein
2654 AP021848.1 GCA_011403135.1_02654 CDS open 2680692-2681045 354_na     117_aa hypothetical protein
2655 AP021848.1 GCA_011403135.1_02655 CDS open 2681491-2682330 840_na     279_aa noc Nucleoid occlusion protein
2656 AP021848.1 GCA_011403135.1_02656 CDS open 2682373-2683095 723_na     240_aa rsmG Ribosomal RNA small subunit methyltransferase G
2657 AP021848.1 GCA_011403135.1_02657 CDS open 2683092-2684972 1881_na     626_aa mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
2658 AP021848.1 GCA_011403135.1_02658 CDS open 2685025-2686404 1380_na     459_aa mnmE tRNA modification GTPase MnmE
2659 AP021848.1 GCA_011403135.1_02659 CDS open 2686554-2686895 342_na     113_aa rnpA Ribonuclease P protein component
2660 AP021848.1 GCA_011403135.1_02660 CDS open 2686981-2687118 138_na     45_aa rpmH 50S ribosomal protein L34