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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Phocaeicola dorei (GCA_013009875.1)

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PROKKA Annotations for GCA_013009875.1
Genome Selected: Phocaeicola dorei
ContigsBases CDSrRNA tmRNAtRNA
1 5515594 4495 21 1 79
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Annotation Table [page:10]    |    Number of Records Found: 4638 [10 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
4501 CP046425.1 GCA_013009875.1_04501 CDS open 5342681-5344924 2244_na     747_aa hypothetical protein
4502 CP046425.1 GCA_013009875.1_04502 CDS open 5344936-5347341 2406_na     801_aa hypothetical protein
4503 CP046425.1 GCA_013009875.1_04503 CDS open 5347412-5349814 2403_na     800_aa hypothetical protein
4504 CP046425.1 GCA_013009875.1_04504 CDS open 5349851-5352574 2724_na     907_aa hypothetical protein
4505 CP046425.1 GCA_013009875.1_04505 CDS open 5352917-5353915 999_na     332_aa hypothetical protein
4506 CP046425.1 GCA_013009875.1_04506 CDS open 5353944-5355608 1665_na     554_aa hypothetical protein
4507 CP046425.1 GCA_013009875.1_04507 CDS open 5355621-5358656 3036_na     1011_aa susC_21 TonB-dependent receptor SusC
4508 CP046425.1 GCA_013009875.1_04508 CDS open 5358691-5361126 2436_na     811_aa hypothetical protein
4509 CP046425.1 GCA_013009875.1_04509 CDS open 5361505-5362116 612_na     203_aa pinR_2 Serine recombinase PinR
4510 CP046425.1 GCA_013009875.1_04510 CDS open 5362630-5362767 138_na     45_aa hypothetical protein
4511 CP046425.1 GCA_013009875.1_04511 CDS open 5362973-5363554 582_na     193_aa hypothetical protein
4512 CP046425.1 GCA_013009875.1_04512 CDS open 5363892-5364077 186_na     61_aa hypothetical protein
4513 CP046425.1 GCA_013009875.1_04513 CDS open 5364401-5367565 3165_na     1054_aa susC_22 TonB-dependent receptor SusC
4514 CP046425.1 GCA_013009875.1_04514 CDS open 5367590-5369362 1773_na     590_aa hypothetical protein
4515 CP046425.1 GCA_013009875.1_04515 CDS open 5369443-5370783 1341_na     446_aa hypothetical protein
4516 CP046425.1 GCA_013009875.1_04516 CDS open 5370885-5374871 3987_na     1328_aa rcsC_45 Sensor histidine kinase RcsC
4517 CP046425.1 GCA_013009875.1_04517 CDS open 5374965-5375543 579_na     192_aa rbr Rubrerythrin
4518 CP046425.1 GCA_013009875.1_04518 CDS open 5375725-5375994 270_na     89_aa hypothetical protein
4519 CP046425.1 GCA_013009875.1_04519 CDS open 5376093-5377775 1683_na     560_aa dauA C4-dicarboxylic acid transporter DauA
4520 CP046425.1 GCA_013009875.1_04520 CDS open 5377872-5379191 1320_na     439_aa hypothetical protein
4521 CP046425.1 GCA_013009875.1_04521 CDS open 5379204-5381378 2175_na     724_aa lagD Lactococcin-G-processing and transport ATP-binding protein LagD
4522 CP046425.1 GCA_013009875.1_04522 CDS open 5381405-5382571 1167_na     388_aa hlyD Hemolysin secretion protein D%2C chromosomal
4523 CP046425.1 GCA_013009875.1_04523 CDS open 5382773-5382970 198_na     65_aa hypothetical protein
4524 CP046425.1 GCA_013009875.1_04524 CDS open 5383343-5384575 1233_na     410_aa xerC_54 Tyrosine recombinase XerC
4525 CP046425.1 GCA_013009875.1_04525 CDS open 5384597-5384989 393_na     130_aa hypothetical protein
4526 CP046425.1 GCA_013009875.1_04526 CDS open 5385561-5386928 1368_na     455_aa hypothetical protein
4527 CP046425.1 GCA_013009875.1_04527 CDS open 5386972-5387433 462_na     153_aa argA Amino-acid acetyltransferase
4528 CP046425.1 GCA_013009875.1_04528 CDS open 5387712-5387852 141_na     46_aa hypothetical protein
4529 CP046425.1 GCA_013009875.1_04529 CDS open 5387875-5388045 171_na     56_aa hypothetical protein
4530 CP046425.1 GCA_013009875.1_04530 CDS open 5388035-5388274 240_na     79_aa hypothetical protein
4531 CP046425.1 GCA_013009875.1_04531 CDS open 5388433-5388579 147_na     48_aa hypothetical protein
4532 CP046425.1 GCA_013009875.1_04532 CDS open 5388788-5389654 867_na     288_aa hypothetical protein
4533 CP046425.1 GCA_013009875.1_04533 CDS open 5389674-5390021 348_na     115_aa hypothetical protein
4534 CP046425.1 GCA_013009875.1_04534 CDS open 5390122-5390235 114_na     37_aa hypothetical protein
4535 CP046425.1 GCA_013009875.1_04535 CDS open 5390249-5390419 171_na     56_aa hypothetical protein
4536 CP046425.1 GCA_013009875.1_04536 CDS open 5390438-5390617 180_na     59_aa hypothetical protein
4537 CP046425.1 GCA_013009875.1_04537 CDS open 5390664-5390810 147_na     48_aa hypothetical protein
4538 CP046425.1 GCA_013009875.1_04538 CDS open 5391322-5391567 246_na     81_aa hypothetical protein
4539 CP046425.1 GCA_013009875.1_04539 CDS open 5391581-5392156 576_na     191_aa hypothetical protein
4540 CP046425.1 GCA_013009875.1_04540 CDS open 5392207-5392371 165_na     54_aa hypothetical protein
4541 CP046425.1 GCA_013009875.1_04541 CDS open 5392400-5392522 123_na     40_aa hypothetical protein
4542 CP046425.1 GCA_013009875.1_04542 CDS open 5392524-5392685 162_na     53_aa hypothetical protein
4543 CP046425.1 GCA_013009875.1_04543 CDS open 5392769-5392891 123_na     40_aa hypothetical protein
4544 CP046425.1 GCA_013009875.1_04544 CDS open 5393024-5394337 1314_na     437_aa sasA_14 Adaptive-response sensory-kinase SasA
4545 CP046425.1 GCA_013009875.1_04545 CDS open 5394334-5395032 699_na     232_aa czcR Transcriptional activator protein CzcR
4546 CP046425.1 GCA_013009875.1_04546 CDS open 5395104-5395880 777_na     258_aa hypothetical protein
4547 CP046425.1 GCA_013009875.1_04547 CDS open 5395926-5397998 2073_na     690_aa hypothetical protein
4548 CP046425.1 GCA_013009875.1_04548 CDS open 5398161-5398667 507_na     168_aa hypothetical protein
4549 CP046425.1 GCA_013009875.1_04549 CDS open 5398698-5399234 537_na     178_aa trmH tRNA (guanosine(18)-2-O)-methyltransferase
4550 CP046425.1 GCA_013009875.1_04550 CDS open 5399957-5402275 2319_na     772_aa hypothetical protein
4551 CP046425.1 GCA_013009875.1_04551 CDS open 5402378-5403370 993_na     330_aa nadA Quinolinate synthase A
4552 CP046425.1 GCA_013009875.1_04552 CDS open 5403365-5403538 174_na     57_aa hypothetical protein
4553 CP046425.1 GCA_013009875.1_04553 CDS open 5403594-5403821 228_na     75_aa hypothetical protein
4554 CP046425.1 GCA_013009875.1_04554 CDS open 5403840-5408258 4419_na     1472_aa rcsC_46 Sensor histidine kinase RcsC
4555 CP046425.1 GCA_013009875.1_04555 CDS open 5408392-5410521 2130_na     709_aa hypothetical protein
4556 CP046425.1 GCA_013009875.1_04556 CDS open 5410556-5413846 3291_na     1096_aa TonB-dependent receptor P3
4557 CP046425.1 GCA_013009875.1_04557 CDS open 5413990-5414958 969_na     322_aa pemA_2 Pectinesterase A
4558 CP046425.1 GCA_013009875.1_04558 CDS open 5415002-5415409 408_na     135_aa hypothetical protein
4559 CP046425.1 GCA_013009875.1_04559 CDS open 5415272-5415853 582_na     193_aa dITPXTP pyrophosphatase
4560 CP046425.1 GCA_013009875.1_04560 CDS open 5416013-5416540 528_na     175_aa Acetyltransferase
4561 CP046425.1 GCA_013009875.1_04561 CDS open 5416639-5417535 897_na     298_aa hypothetical protein
4562 CP046425.1 GCA_013009875.1_04562 CDS open 5417617-5420451 2835_na     944_aa leuS Leucine--tRNA ligase
4563 CP046425.1 GCA_013009875.1_04563 CDS open 5420826-5424809 3984_na     1327_aa rcsC_47 Sensor histidine kinase RcsC
4564 CP046425.1 GCA_013009875.1_04564 CDS open 5424952-5427390 2439_na     812_aa Beta-galactosidase BoGH2A
4565 CP046425.1 GCA_013009875.1_04565 CDS open 5427424-5430477 3054_na     1017_aa TonB-dependent receptor P3
4566 CP046425.1 GCA_013009875.1_04566 CDS open 5430492-5432273 1782_na     593_aa hypothetical protein
4567 CP046425.1 GCA_013009875.1_04567 CDS open 5432337-5435561 3225_na     1074_aa tri1_2 Tricorn protease
4568 CP046425.1 GCA_013009875.1_04568 CDS open 5435740-5436327 588_na     195_aa algU_3 RNA polymerase sigma-H factor
4569 CP046425.1 GCA_013009875.1_04569 CDS open 5436416-5437426 1011_na     336_aa hypothetical protein
4570 CP046425.1 GCA_013009875.1_04570 CDS open 5437491-5441018 3528_na     1175_aa susC_23 TonB-dependent receptor SusC
4571 CP046425.1 GCA_013009875.1_04571 CDS open 5441040-5442962 1923_na     640_aa hypothetical protein
4572 CP046425.1 GCA_013009875.1_04572 CDS open 5443057-5444478 1422_na     473_aa atsA_2 Arylsulfatase
4573 CP046425.1 GCA_013009875.1_04573 CDS open 5444589-5446115 1527_na     508_aa N-acetylgalactosamine-6-O-sulfatase
4574 CP046425.1 GCA_013009875.1_04574 CDS open 5446372-5447964 1593_na     530_aa expZ Nucleotide-binding protein ExpZ
4575 CP046425.1 GCA_013009875.1_04575 CDS open 5448053-5450647 2595_na     864_aa xyl3A Xylan 1%2C4-beta-xylosidase
4576 CP046425.1 GCA_013009875.1_04576 CDS open 5450832-5452325 1494_na     497_aa scpC Propionyl-CoA:succinate CoA transferase
4577 CP046425.1 GCA_013009875.1_04577 CDS open 5452364-5452714 351_na     116_aa hypothetical protein
4578 CP046425.1 GCA_013009875.1_04578 CDS open 5453052-5454422 1371_na     456_aa miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
4579 CP046425.1 GCA_013009875.1_04579 CDS open 5454422-5454823 402_na     133_aa mip_2 Peptidyl-prolyl cis-trans isomerase Mip
4580 CP046425.1 GCA_013009875.1_04580 CDS open 5454833-5455069 237_na     78_aa hypothetical protein
4581 CP046425.1 GCA_013009875.1_04581 CDS open 5455237-5456103 867_na     288_aa COQ3_2 Ubiquinone biosynthesis O-methyltransferase%2C mitochondrial
4582 CP046425.1 GCA_013009875.1_04582 CDS open 5456106-5456975 870_na     289_aa ftsX Cell division protein FtsX
4583 CP046425.1 GCA_013009875.1_04583 CDS open 5456988-5457233 246_na     81_aa hypothetical protein
4584 CP046425.1 GCA_013009875.1_04584 CDS open 5457271-5458071 801_na     266_aa uppP Undecaprenyl-diphosphatase
4585 CP046425.1 GCA_013009875.1_04585 CDS open 5458076-5458783 708_na     235_aa truB tRNA pseudouridine synthase B
4586 CP046425.1 GCA_013009875.1_04586 CDS open 5458795-5459850 1056_na     351_aa queA_2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
4587 CP046425.1 GCA_013009875.1_04587 CDS open 5459869-5460315 447_na     148_aa sulD Bifunctional folate synthesis protein
4588 CP046425.1 GCA_013009875.1_04588 CDS open 5460402-5460587 186_na     61_aa hypothetical protein
4589 CP046425.1 GCA_013009875.1_04589 CDS open 5460661-5461713 1053_na     350_aa hypothetical protein
4590 CP046425.1 GCA_013009875.1_04590 CDS open 5461726-5463273 1548_na     515_aa hypothetical protein
4591 CP046425.1 GCA_013009875.1_04591 CDS open 5463286-5464146 861_na     286_aa hypothetical protein
4592 CP046425.1 GCA_013009875.1_04592 CDS open 5464176-5464748 573_na     190_aa hypothetical protein
4593 CP046425.1 GCA_013009875.1_04593 CDS open 5464760-5465128 369_na     122_aa hypothetical protein
4594 CP046425.1 GCA_013009875.1_04594 CDS open 5465311-5467188 1878_na     625_aa hypothetical protein
4595 CP046425.1 GCA_013009875.1_04595 CDS open 5467525-5468667 1143_na     380_aa wecH_2 O-acetyltransferase WecH
4596 CP046425.1 GCA_013009875.1_04596 CDS open 5468682-5469320 639_na     212_aa hypothetical protein
4597 CP046425.1 GCA_013009875.1_04597 CDS open 5469566-5470942 1377_na     458_aa ribZ Riboflavin transporter RibZ
4598 CP046425.1 misc_RNA open 5471068-5471127 SAM-II_long_loops
4599 CP046425.1 GCA_013009875.1_04599 CDS open 5471220-5472512 1293_na     430_aa metK S-adenosylmethionine synthase
4600 CP046425.1 GCA_013009875.1_04600 CDS open 5472627-5473214 588_na     195_aa Putative cytokinin riboside 5-monophosphate phosphoribohydrolase
4601 CP046425.1 GCA_013009875.1_04601 CDS open 5473211-5474023 813_na     270_aa hypothetical protein
4602 CP046425.1 GCA_013009875.1_04602 CDS open 5474028-5474777 750_na     249_aa hypothetical protein
4603 CP046425.1 GCA_013009875.1_04603 CDS open 5474880-5475272 393_na     130_aa rnpA Ribonuclease P protein component
4604 CP046425.1 GCA_013009875.1_04604 CDS open 5475269-5475490 222_na     73_aa Putative membrane protein insertion efficiency factor
4605 CP046425.1 GCA_013009875.1_04605 CDS open 5475505-5476134 630_na     209_aa dtd3 D-aminoacyl-tRNA deacylase
4606 CP046425.1 GCA_013009875.1_04606 CDS open 5476213-5477505 1293_na     430_aa tyrS Tyrosine--tRNA ligase
4607 CP046425.1 GCA_013009875.1_04607 CDS open 5477598-5480852 3255_na     1084_aa tri1_3 Tricorn protease
4608 CP046425.1 tRNA open 5480987-5481058 tRNA-Gln(ttg)
4609 CP046425.1 GCA_013009875.1_04609 CDS open 5481407-5481538 132_na     43_aa hypothetical protein
4610 CP046425.1 GCA_013009875.1_04610 CDS open 5481715-5482302 588_na     195_aa hypothetical protein
4611 CP046425.1 GCA_013009875.1_04611 CDS open 5482315-5483733 1419_na     472_aa hypothetical protein
4612 CP046425.1 GCA_013009875.1_04612 CDS open 5483757-5485373 1617_na     538_aa hypothetical protein
4613 CP046425.1 GCA_013009875.1_04613 CDS open 5485447-5486418 972_na     323_aa hypothetical protein
4614 CP046425.1 GCA_013009875.1_04614 CDS open 5486415-5487662 1248_na     415_aa hypothetical protein
4615 CP046425.1 GCA_013009875.1_04615 CDS open 5487682-5491014 3333_na     1110_aa hypothetical protein
4616 CP046425.1 GCA_013009875.1_04616 CDS open 5491210-5491716 507_na     168_aa hypothetical protein
4617 CP046425.1 GCA_013009875.1_04617 CDS open 5491835-5494447 2613_na     870_aa mutS_2 DNA mismatch repair protein MutS
4618 CP046425.1 GCA_013009875.1_04618 CDS open 5494497-5496476 1980_na     659_aa hypothetical protein
4619 CP046425.1 GCA_013009875.1_04619 CDS open 5496439-5496630 192_na     63_aa hypothetical protein
4620 CP046425.1 GCA_013009875.1_04620 CDS open 5496683-5497270 588_na     195_aa hypothetical protein
4621 CP046425.1 GCA_013009875.1_04621 CDS open 5497313-5498980 1668_na     555_aa hypothetical protein
4622 CP046425.1 GCA_013009875.1_04622 CDS open 5499089-5499547 459_na     152_aa hypothetical protein
4623 CP046425.1 GCA_013009875.1_04623 CDS open 5499772-5500731 960_na     319_aa hypothetical protein
4624 CP046425.1 GCA_013009875.1_04624 CDS open 5500848-5501093 246_na     81_aa hypothetical protein
4625 CP046425.1 GCA_013009875.1_04625 CDS open 5501401-5502099 699_na     232_aa hypothetical protein
4626 CP046425.1 GCA_013009875.1_04626 CDS open 5502335-5502991 657_na     218_aa cat Chloramphenicol acetyltransferase
4627 CP046425.1 GCA_013009875.1_04627 CDS open 5502992-5503813 822_na     273_aa lgt_2 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase
4628 CP046425.1 GCA_013009875.1_04628 CDS open 5503810-5504721 912_na     303_aa hypothetical protein
4629 CP046425.1 GCA_013009875.1_04629 CDS open 5504853-5505956 1104_na     367_aa ychF Ribosome-binding ATPase YchF
4630 CP046425.1 GCA_013009875.1_04630 CDS open 5506155-5506541 387_na     128_aa hypothetical protein
4631 CP046425.1 GCA_013009875.1_04631 CDS open 5506568-5506780 213_na     70_aa hypothetical protein
4632 CP046425.1 GCA_013009875.1_04632 CDS open 5506851-5509766 2916_na     971_aa polA DNA polymerase I
4633 CP046425.1 GCA_013009875.1_04633 CDS open 5509858-5510832 975_na     324_aa ispB Octaprenyl diphosphate synthase
4634 CP046425.1 GCA_013009875.1_04634 CDS open 5511013-5511960 948_na     315_aa deoC Deoxyribose-phosphate aldolase
4635 CP046425.1 GCA_013009875.1_04635 CDS open 5511967-5512287 321_na     106_aa ypjD putative protein YpjD
4636 CP046425.1 GCA_013009875.1_04636 CDS open 5512287-5512739 453_na     150_aa dtd D-aminoacyl-tRNA deacylase
4637 CP046425.1 GCA_013009875.1_04637 CDS open 5512896-5514716 1821_na     606_aa uvrC UvrABC system protein C
4638 CP046425.1 GCA_013009875.1_04638 CDS open 5515070-5515594 525_na     174_aa apt Adenine phosphoribosyltransferase