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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Nanogingivalis sp. HMT-400 (GCA_015256915.3)

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PROKKA Annotations for GCA_015256915.3
Genome Selected: Nanogingivalis sp. HMT-400
ContigsBases CDSrRNA tmRNAtRNA
1 637739 609 6 0 38
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Annotation Table [page:2]    |    Number of Records Found: 656 [2 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
501 CP076101.2 misc_RNA open 487829-487958 lysM-TM7
502 CP076101.2 GCA_015256915.3_00502 CDS open 488047-489216 1170_na     389_aa mltG Endolytic murein transglycosylase
503 CP076101.2 GCA_015256915.3_00503 CDS open 489216-489632 417_na     138_aa yrrK Putative pre-16S rRNA nuclease
504 CP076101.2 GCA_015256915.3_00504 CDS open 489629-491239 1611_na     536_aa hypothetical protein
505 CP076101.2 GCA_015256915.3_00505 CDS open 491252-492511 1260_na     419_aa ftsA_3 Cell division protein FtsA
506 CP076101.2 GCA_015256915.3_00506 CDS open 492592-494475 1884_na     627_aa hypothetical protein
507 CP076101.2 GCA_015256915.3_00507 CDS open 494867-496150 1284_na     427_aa hypothetical protein
508 CP076101.2 GCA_015256915.3_00508 CDS open 496161-496928 768_na     255_aa tpiA Triosephosphate isomerase
509 CP076101.2 GCA_015256915.3_00509 CDS open 496970-498286 1317_na     438_aa pgk Phosphoglycerate kinase
510 CP076101.2 GCA_015256915.3_00510 CDS open 498710-500536 1827_na     608_aa typA GTP-binding protein TypABipA
511 CP076101.2 GCA_015256915.3_00511 CDS open 500609-501058 450_na     149_aa hypothetical protein
512 CP076101.2 tRNA open 501188-501264 tRNA-Val(tac)
513 CP076101.2 GCA_015256915.3_00513 CDS open 501419-501874 456_na     151_aa hypothetical protein
514 CP076101.2 GCA_015256915.3_00514 CDS open 502138-503535 1398_na     465_aa hypothetical protein
515 CP076101.2 GCA_015256915.3_00515 CDS open 503756-505990 2235_na     744_aa hypothetical protein
516 CP076101.2 GCA_015256915.3_00516 CDS open 506067-506918 852_na     283_aa folD Bifunctional protein FolD protein
517 CP076101.2 GCA_015256915.3_00517 CDS open 507016-507567 552_na     183_aa hypothetical protein
518 CP076101.2 GCA_015256915.3_00518 CDS open 507623-508669 1047_na     348_aa murB UDP-N-acetylenolpyruvoylglucosamine reductase
519 CP076101.2 tRNA open 508722-508798 tRNA-Arg(tcg)
520 CP076101.2 GCA_015256915.3_00520 CDS open 508841-510433 1593_na     530_aa hypothetical protein
521 CP076101.2 GCA_015256915.3_00521 CDS open 510485-511756 1272_na     423_aa glyA Serine hydroxymethyltransferase
522 CP076101.2 GCA_015256915.3_00522 CDS open 511907-513436 1530_na     509_aa murAA UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
523 CP076101.2 GCA_015256915.3_00523 CDS open 513465-513884 420_na     139_aa hypothetical protein
524 CP076101.2 tRNA open 513978-514054 tRNA-His(gtg)
525 CP076101.2 GCA_015256915.3_00525 CDS open 514100-514567 468_na     155_aa hypothetical protein
526 CP076101.2 tRNA open 514647-514721 tRNA-Gly(tcc)
527 CP076101.2 tRNA open 514832-514908 tRNA-Arg(tct)
528 CP076101.2 tRNA open 515490-515566 tRNA-Lys(ctt)
529 CP076101.2 GCA_015256915.3_00529 CDS open 515628-517997 2370_na     789_aa clpX ATP-dependent Clp protease ATP-binding subunit ClpX
530 CP076101.2 GCA_015256915.3_00530 CDS open 517994-518467 474_na     157_aa hypothetical protein
531 CP076101.2 GCA_015256915.3_00531 CDS open 518650-519357 708_na     235_aa hypothetical protein
532 CP076101.2 GCA_015256915.3_00532 CDS open 519482-520987 1506_na     501_aa rny Ribonuclease Y
533 CP076101.2 GCA_015256915.3_00533 CDS open 521034-522254 1221_na     406_aa hypothetical protein
534 CP076101.2 GCA_015256915.3_00534 CDS open 522257-524740 2484_na     827_aa hypothetical protein
535 CP076101.2 GCA_015256915.3_00535 CDS open 524741-525163 423_na     140_aa hypothetical protein
536 CP076101.2 GCA_015256915.3_00536 CDS open 525270-527852 2583_na     860_aa polA DNA polymerase I%2C thermostable
537 CP076101.2 GCA_015256915.3_00537 CDS open 527922-528863 942_na     313_aa trxB Thioredoxin reductase
538 CP076101.2 GCA_015256915.3_00538 CDS open 528856-529545 690_na     229_aa hypothetical protein
539 CP076101.2 GCA_015256915.3_00539 CDS open 529554-532049 2496_na     831_aa pheT Phenylalanine--tRNA ligase beta subunit
540 CP076101.2 GCA_015256915.3_00540 CDS open 532046-532285 240_na     79_aa hypothetical protein
541 CP076101.2 GCA_015256915.3_00541 CDS open 532286-533305 1020_na     339_aa pheS Phenylalanine--tRNA ligase alpha subunit
542 CP076101.2 GCA_015256915.3_00542 CDS open 533357-533623 267_na     88_aa hypothetical protein
543 CP076101.2 GCA_015256915.3_00543 CDS open 533702-534538 837_na     278_aa aqpZ Aquaporin Z
544 CP076101.2 GCA_015256915.3_00544 CDS open 534591-535691 1101_na     366_aa hypothetical protein
545 CP076101.2 GCA_015256915.3_00545 CDS open 535705-535845 141_na     46_aa hypothetical protein
546 CP076101.2 GCA_015256915.3_00546 CDS open 535869-536333 465_na     154_aa greA_2 Transcription elongation factor GreA
547 CP076101.2 GCA_015256915.3_00547 CDS open 536436-537035 600_na     199_aa hypothetical protein
548 CP076101.2 GCA_015256915.3_00548 CDS open 537076-538761 1686_na     561_aa argS Arginine--tRNA ligase
549 CP076101.2 GCA_015256915.3_00549 CDS open 538818-541175 2358_na     785_aa ctpE_2 Calcium-transporting ATPase CtpE
550 CP076101.2 GCA_015256915.3_00550 CDS open 541201-541554 354_na     117_aa hypothetical protein
551 CP076101.2 GCA_015256915.3_00551 CDS open 541760-542401 642_na     213_aa trmD tRNA (guanine-N(1)-)-methyltransferase
552 CP076101.2 tRNA open 542464-542540 tRNA-Pro(tgg)
553 CP076101.2 GCA_015256915.3_00553 CDS open 542671-543090 420_na     139_aa arcC1 Carbamate kinase 1
554 CP076101.2 GCA_015256915.3_00554 CDS open 543205-543339 135_na     44_aa hypothetical protein
555 CP076101.2 GCA_015256915.3_00555 CDS open 544046-544243 198_na     65_aa pyk Pyruvate kinase
556 CP076101.2 GCA_015256915.3_00556 CDS open 544949-545140 192_na     63_aa hypothetical protein
557 CP076101.2 tRNA open 545260-545334 tRNA-Glu(ttc)
558 CP076101.2 tRNA open 545529-545603 tRNA-Gln(ttg)
559 CP076101.2 GCA_015256915.3_00559 CDS open 545646-546386 741_na     246_aa gatD Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD
560 CP076101.2 GCA_015256915.3_00560 CDS open 546383-547669 1287_na     428_aa murT Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT
561 CP076101.2 GCA_015256915.3_00561 CDS open 547669-548046 378_na     125_aa hypothetical protein
562 CP076101.2 GCA_015256915.3_00562 CDS open 548046-548468 423_na     140_aa tsaE tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
563 CP076101.2 GCA_015256915.3_00563 CDS open 548639-549937 1299_na     432_aa hypothetical protein
564 CP076101.2 GCA_015256915.3_00564 CDS open 549934-551190 1257_na     418_aa hypothetical protein
565 CP076101.2 GCA_015256915.3_00565 CDS open 551276-552571 1296_na     431_aa murC UDP-N-acetylmuramate--L-alanine ligase
566 CP076101.2 tRNA open 552650-552736 tRNA-Leu(gag)
567 CP076101.2 GCA_015256915.3_00567 CDS open 552761-554599 1839_na     612_aa hypothetical protein
568 CP076101.2 GCA_015256915.3_00568 CDS open 554612-554839 228_na     75_aa hypothetical protein
569 CP076101.2 GCA_015256915.3_00569 CDS open 554839-555210 372_na     123_aa hypothetical protein
570 CP076101.2 tRNA open 555274-555350 tRNA-Lys(ttt)
571 CP076101.2 GCA_015256915.3_00571 CDS open 555396-555860 465_na     154_aa hypothetical protein
572 CP076101.2 GCA_015256915.3_00572 CDS open 555977-557077 1101_na     366_aa dnaJ Chaperone protein DnaJ
573 CP076101.2 GCA_015256915.3_00573 CDS open 557119-557439 321_na     106_aa hypothetical protein
574 CP076101.2 GCA_015256915.3_00574 CDS open 557479-557646 168_na     55_aa hypothetical protein
575 CP076101.2 GCA_015256915.3_00575 CDS open 557686-558069 384_na     127_aa hypothetical protein
576 CP076101.2 GCA_015256915.3_00576 CDS open 558177-560075 1899_na     632_aa dnaK Chaperone protein DnaK
577 CP076101.2 GCA_015256915.3_00577 CDS open 560692-563058 2367_na     788_aa xpkA Xylulose-5-phosphate phosphoketolase
578 CP076101.2 GCA_015256915.3_00578 CDS open 563284-563811 528_na     175_aa grpE Protein GrpE
579 CP076101.2 GCA_015256915.3_00579 CDS open 563827-564570 744_na     247_aa hrcA Heat-inducible transcription repressor HrcA
580 CP076101.2 GCA_015256915.3_00580 CDS open 564787-565515 729_na     242_aa gmk Guanylate kinase
581 CP076101.2 GCA_015256915.3_00581 CDS open 565528-566106 579_na     192_aa hypothetical protein
582 CP076101.2 GCA_015256915.3_00582 CDS open 566094-566777 684_na     227_aa hypothetical protein
583 CP076101.2 GCA_015256915.3_00583 CDS open 567169-567879 711_na     236_aa putative transcriptional regulatory proteinMSMEI_2866
584 CP076101.2 GCA_015256915.3_00584 CDS open 567990-569363 1374_na     457_aa merA Mercuric reductase
585 CP076101.2 GCA_015256915.3_00585 CDS open 569374-569643 270_na     89_aa hypothetical protein
586 CP076101.2 GCA_015256915.3_00586 CDS open 569640-570356 717_na     238_aa hypothetical protein
587 CP076101.2 GCA_015256915.3_00587 CDS open 570510-570632 123_na     40_aa hypothetical protein
588 CP076101.2 tRNA open 570708-570784 tRNA-Met(cat)
589 CP076101.2 tRNA open 570886-570963 tRNA-Met(cat)
590 CP076101.2 GCA_015256915.3_00590 CDS open 571016-571456 441_na     146_aa hypothetical protein
591 CP076101.2 tRNA open 571497-571572 tRNA-Met(cat)
592 CP076101.2 GCA_015256915.3_00592 CDS open 571657-571863 207_na     68_aa hypothetical protein
593 CP076101.2 GCA_015256915.3_00593 CDS open 571933-572616 684_na     227_aa hypothetical protein
594 CP076101.2 GCA_015256915.3_00594 CDS open 572653-574212 1560_na     519_aa uvrC UvrABC system protein C
595 CP076101.2 GCA_015256915.3_00595 CDS open 574694-575566 873_na     290_aa hypothetical protein
596 CP076101.2 GCA_015256915.3_00596 CDS open 575625-577523 1899_na     632_aa fda Fructose-bisphosphate aldolase class 1
597 CP076101.2 GCA_015256915.3_00597 CDS open 577590-578915 1326_na     441_aa rclA putative pyridine nucleotide-disulfide oxidoreductase RclA
598 CP076101.2 GCA_015256915.3_00598 CDS open 579049-580647 1599_na     532_aa gpmA_3 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
599 CP076101.2 tRNA open 580820-580894 tRNA-Asn(gtt)
600 CP076101.2 GCA_015256915.3_00600 CDS open 580998-582302 1305_na     434_aa hypothetical protein
601 CP076101.2 GCA_015256915.3_00601 CDS open 582295-582981 687_na     228_aa ytrE ABC transporter ATP-binding protein YtrE
602 CP076101.2 GCA_015256915.3_00602 CDS open 582995-584575 1581_na     526_aa hypothetical protein
603 CP076101.2 GCA_015256915.3_00603 CDS open 584584-584925 342_na     113_aa hypothetical protein
604 CP076101.2 GCA_015256915.3_00604 CDS open 585018-586031 1014_na     337_aa galE UDP-glucose 4-epimerase
605 CP076101.2 GCA_015256915.3_00605 CDS open 586108-588918 2811_na     936_aa uvrA UvrABC system protein A
606 CP076101.2 GCA_015256915.3_00606 CDS open 588944-589603 660_na     219_aa trmB tRNA (guanine-N(7)-)-methyltransferase
607 CP076101.2 GCA_015256915.3_00607 CDS open 589613-590026 414_na     137_aa hypothetical protein
608 CP076101.2 GCA_015256915.3_00608 CDS open 590019-590594 576_na     191_aa hypothetical protein
609 CP076101.2 GCA_015256915.3_00609 CDS open 590584-592350 1767_na     588_aa aspS Aspartate--tRNA ligase
610 CP076101.2 GCA_015256915.3_00610 CDS open 592399-593298 900_na     299_aa hypothetical protein
611 CP076101.2 GCA_015256915.3_00611 CDS open 593381-594112 732_na     243_aa hypothetical protein
612 CP076101.2 GCA_015256915.3_00612 CDS open 594477-595064 588_na     195_aa elmMIII 8-demethyl-8-(2%2C3-dimethoxy-alpha-L-rhamnosyl)-tetracenomycin-C 4-O-methyltransferase
613 CP076101.2 GCA_015256915.3_00613 CDS open 595077-595505 429_na     142_aa hypothetical protein
614 CP076101.2 GCA_015256915.3_00614 CDS open 595507-597174 1668_na     555_aa hypothetical protein
615 CP076101.2 GCA_015256915.3_00615 CDS open 597190-598179 990_na     329_aa arcB Ornithine carbamoyltransferase%2C catabolic
616 CP076101.2 GCA_015256915.3_00616 CDS open 598182-599432 1251_na     416_aa arcA Arginine deiminase
617 CP076101.2 GCA_015256915.3_00617 CDS open 599572-599892 321_na     106_aa hypothetical protein
618 CP076101.2 GCA_015256915.3_00618 CDS open 599914-600855 942_na     313_aa mscS Small-conductance mechanosensitive channel
619 CP076101.2 GCA_015256915.3_00619 CDS open 600900-601250 351_na     116_aa lexA LexA repressor
620 CP076101.2 GCA_015256915.3_00620 CDS open 601240-602631 1392_na     463_aa tagU Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU
621 CP076101.2 GCA_015256915.3_00621 CDS open 602864-604330 1467_na     488_aa hypothetical protein
622 CP076101.2 GCA_015256915.3_00622 CDS open 604317-605456 1140_na     379_aa gtfA UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase GtfA subunit
623 CP076101.2 GCA_015256915.3_00623 CDS open 605456-606883 1428_na     475_aa hypothetical protein
624 CP076101.2 GCA_015256915.3_00624 CDS open 606861-608402 1542_na     513_aa hypothetical protein
625 CP076101.2 GCA_015256915.3_00625 CDS open 608469-610610 2142_na     713_aa hypothetical protein
626 CP076101.2 GCA_015256915.3_00626 CDS open 610619-611734 1116_na     371_aa hypothetical protein
627 CP076101.2 GCA_015256915.3_00627 CDS open 611808-612971 1164_na     387_aa btuD Vitamin B12 import ATP-binding protein BtuD
628 CP076101.2 GCA_015256915.3_00628 CDS open 612971-613795 825_na     274_aa hypothetical protein
629 CP076101.2 GCA_015256915.3_00629 CDS open 613920-615647 1728_na     575_aa hypothetical protein
630 CP076101.2 GCA_015256915.3_00630 CDS open 615619-616221 603_na     200_aa hypothetical protein
631 CP076101.2 GCA_015256915.3_00631 CDS open 616337-617281 945_na     314_aa putative glycosyltransferase
632 CP076101.2 GCA_015256915.3_00632 CDS open 617250-617681 432_na     143_aa hypothetical protein
633 CP076101.2 GCA_015256915.3_00633 CDS open 617767-618222 456_na     151_aa hypothetical protein
634 CP076101.2 GCA_015256915.3_00634 CDS open 618224-619186 963_na     320_aa yidC Membrane protein insertase YidC
635 CP076101.2 GCA_015256915.3_00635 CDS open 619210-619563 354_na     117_aa rnpA Ribonuclease P protein component
636 CP076101.2 GCA_015256915.3_00636 CDS open 619642-619857 216_na     71_aa hypothetical protein
637 CP076101.2 GCA_015256915.3_00637 CDS open 619847-620266 420_na     139_aa hypothetical protein
638 CP076101.2 GCA_015256915.3_00638 CDS open 620373-621599 1227_na     408_aa lepA_1 Elongation factor 4
639 CP076101.2 GCA_015256915.3_00639 CDS open 621599-622150 552_na     183_aa lepA_2 Elongation factor 4
640 CP076101.2 GCA_015256915.3_00640 CDS open 622192-623823 1632_na     543_aa murJ Lipid II flippase MurJ
641 CP076101.2 GCA_015256915.3_00641 CDS open 623826-625679 1854_na     617_aa ftsH ATP-dependent zinc metalloprotease FtsH
642 CP076101.2 GCA_015256915.3_00642 CDS open 625853-626746 894_na     297_aa tilS tRNA(Ile)-lysidine synthase
643 CP076101.2 GCA_015256915.3_00643 CDS open 626803-628077 1275_na     424_aa epsE Type II secretion system protein E
644 CP076101.2 GCA_015256915.3_00644 CDS open 628108-628665 558_na     185_aa hypothetical protein
645 CP076101.2 GCA_015256915.3_00645 CDS open 628668-629402 735_na     244_aa recX Regulatory protein RecX
646 CP076101.2 GCA_015256915.3_00646 CDS open 629447-630508 1062_na     353_aa recA Protein RecA
647 CP076101.2 GCA_015256915.3_00647 CDS open 630615-630791 177_na     58_aa hypothetical protein
648 CP076101.2 GCA_015256915.3_00648 CDS open 630918-631307 390_na     129_aa hypothetical protein
649 CP076101.2 GCA_015256915.3_00649 CDS open 631351-632100 750_na     249_aa hypothetical protein
650 CP076101.2 GCA_015256915.3_00650 CDS open 632093-633106 1014_na     337_aa ruvB_2 Holliday junction ATP-dependent DNA helicase RuvB
651 CP076101.2 GCA_015256915.3_00651 CDS open 633211-633651 441_na     146_aa hypothetical protein
652 CP076101.2 GCA_015256915.3_00652 CDS open 633699-634274 576_na     191_aa ruvA Holliday junction ATP-dependent DNA helicase RuvA
653 CP076101.2 GCA_015256915.3_00653 CDS open 634305-634790 486_na     161_aa ruvC Crossover junction endodeoxyribonuclease RuvC
654 CP076101.2 GCA_015256915.3_00654 CDS open 634787-636250 1464_na     487_aa hypothetical protein
655 CP076101.2 GCA_015256915.3_00655 CDS open 636237-637235 999_na     332_aa hypothetical protein
656 CP076101.2 GCA_015256915.3_00656 CDS open 637333-637470 138_na     45_aa rpmH 50S ribosomal protein L34