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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Nanogingivalis sp. HMT-399 (GCA_015257815.1)

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PROKKA Annotations for GCA_015257815.1
Genome Selected: Nanogingivalis sp. HMT-399
ContigsBases CDSrRNA tmRNAtRNA
48 640,359 629 1 0 38
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Annotation Table [page:2]    |    Number of Records Found: 671 [2 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
501 JABZJL010000005.1 GCA_015257815.1_00501 CDS open 13156-13896 741_na     246_aa gatD Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD
502 JABZJL010000005.1 tRNA open 13939-14013 tRNA-Gln(ttg)
503 JABZJL010000005.1 GCA_015257815.1_00503 CDS open 14136-14984 849_na     282_aa hypothetical protein
504 JABZJL010000005.1 tRNA open 15075-15149 tRNA-Glu(ttc)
505 JABZJL010000005.1 GCA_015257815.1_00505 CDS open 15262-16692 1431_na     476_aa pyk Pyruvate kinase
506 JABZJL010000005.1 GCA_015257815.1_00506 CDS open 16766-17701 936_na     311_aa arcC1 Carbamate kinase 1
507 JABZJL010000005.1 tRNA open 17833-17909 tRNA-Pro(tgg)
508 JABZJL010000005.1 GCA_015257815.1_00508 CDS open 17972-18613 642_na     213_aa trmD tRNA (guanine-N(1)-)-methyltransferase
509 JABZJL010000005.1 GCA_015257815.1_00509 CDS open 18816-19169 354_na     117_aa hypothetical protein
510 JABZJL010000005.1 GCA_015257815.1_00510 CDS open 19194-21551 2358_na     785_aa ctpE_1 Calcium-transporting ATPase CtpE
511 JABZJL010000005.1 GCA_015257815.1_00511 CDS open 21606-23291 1686_na     561_aa argS Arginine--tRNA ligase
512 JABZJL010000005.1 GCA_015257815.1_00512 CDS open 23341-23940 600_na     199_aa hypothetical protein
513 JABZJL010000005.1 GCA_015257815.1_00513 CDS open 24004-26034 2031_na     676_aa hypothetical protein
514 JABZJL010000005.1 GCA_015257815.1_00514 CDS open 26139-26603 465_na     154_aa greA_2 Transcription elongation factor GreA
515 JABZJL010000005.1 GCA_015257815.1_00515 CDS open 26694-27794 1101_na     366_aa hypothetical protein
516 JABZJL010000005.1 GCA_015257815.1_00516 CDS open 27840-28676 837_na     278_aa aqpZ Aquaporin Z
517 JABZJL010000005.1 GCA_015257815.1_00517 CDS open 28755-29021 267_na     88_aa hypothetical protein
518 JABZJL010000005.1 GCA_015257815.1_00518 CDS open 29061-30092 1032_na     343_aa pheS Phenylalanine--tRNA ligase alpha subunit
519 JABZJL010000005.1 GCA_015257815.1_00519 CDS open 30137-32638 2502_na     833_aa pheT Phenylalanine--tRNA ligase beta subunit
520 JABZJL010000005.1 GCA_015257815.1_00520 CDS open 32647-33330 684_na     227_aa hypothetical protein
521 JABZJL010000005.1 GCA_015257815.1_00521 CDS open 33332-34270 939_na     312_aa trxB Thioredoxin reductase
522 JABZJL010000005.1 GCA_015257815.1_00522 CDS open 34292-34951 660_na     219_aa hypothetical protein
523 JABZJL010000005.1 GCA_015257815.1_00523 CDS open 35027-37606 2580_na     859_aa polA DNA polymerase I%2C thermostable
524 JABZJL010000005.1 GCA_015257815.1_00524 CDS open 37673-38095 423_na     140_aa hypothetical protein
525 JABZJL010000006.1 GCA_015257815.1_00525 CDS open 1540-1686 147_na     48_aa hypothetical protein
526 JABZJL010000006.1 GCA_015257815.1_00526 CDS open 1930-2559 630_na     209_aa hypothetical protein
527 JABZJL010000006.1 GCA_015257815.1_00527 CDS open 2599-3774 1176_na     391_aa iscS Cysteine desulfurase IscS
528 JABZJL010000006.1 GCA_015257815.1_00528 CDS open 3775-4389 615_na     204_aa hypothetical protein
529 JABZJL010000006.1 GCA_015257815.1_00529 CDS open 4392-5501 1110_na     369_aa mnmA tRNA-specific 2-thiouridylase MnmA
530 JABZJL010000006.1 GCA_015257815.1_00530 CDS open 5589-6047 459_na     152_aa hypothetical protein
531 JABZJL010000006.1 GCA_015257815.1_00531 CDS open 6143-6520 378_na     125_aa hypothetical protein
532 JABZJL010000006.1 GCA_015257815.1_00532 CDS open 6583-10104 3522_na     1173_aa rep ATP-dependent DNA helicase Rep
533 JABZJL010000006.1 GCA_015257815.1_00533 CDS open 10172-12460 2289_na     762_aa hypothetical protein
534 JABZJL010000006.1 GCA_015257815.1_00534 CDS open 12453-13382 930_na     309_aa hypothetical protein
535 JABZJL010000006.1 GCA_015257815.1_00535 CDS open 13409-14908 1500_na     499_aa ruvB_2 Holliday junction ATP-dependent DNA helicase RuvB
536 JABZJL010000006.1 GCA_015257815.1_00536 CDS open 14901-16259 1359_na     452_aa dnaC Replicative DNA helicase
537 JABZJL010000006.1 GCA_015257815.1_00537 CDS open 16328-17629 1302_na     433_aa phoR Alkaline phosphatase synthesis sensor protein PhoR
538 JABZJL010000006.1 GCA_015257815.1_00538 CDS open 17721-18104 384_na     127_aa secE Protein translocase subunit SecE
539 JABZJL010000006.1 GCA_015257815.1_00539 CDS open 18121-18663 543_na     180_aa nusG Transcription terminationantitermination protein NusG
540 JABZJL010000006.1 GCA_015257815.1_00540 CDS open 19107-21050 1944_na     647_aa hypothetical protein
541 JABZJL010000006.1 GCA_015257815.1_00541 CDS open 21152-21667 516_na     171_aa hypothetical protein
542 JABZJL010000006.1 GCA_015257815.1_00542 CDS open 21870-22295 426_na     141_aa rplK 50S ribosomal protein L11
543 JABZJL010000006.1 GCA_015257815.1_00543 CDS open 22368-23639 1272_na     423_aa tgt Queuine tRNA-ribosyltransferase
544 JABZJL010000006.1 GCA_015257815.1_00544 CDS open 23578-23850 273_na     90_aa hypothetical protein
545 JABZJL010000006.1 GCA_015257815.1_00545 CDS open 24018-24896 879_na     292_aa hypothetical protein
546 JABZJL010000006.1 GCA_015257815.1_00546 CDS open 25092-25373 282_na     93_aa hypothetical protein
547 JABZJL010000006.1 tRNA open 25736-25810 tRNA-Gln(ctg)
548 JABZJL010000006.1 GCA_015257815.1_00548 CDS open 25942-26316 375_na     124_aa hypothetical protein
549 JABZJL010000006.1 GCA_015257815.1_00549 CDS open 26438-26782 345_na     114_aa hypothetical protein
550 JABZJL010000006.1 GCA_015257815.1_00550 CDS open 26884-27111 228_na     75_aa hypothetical protein
551 JABZJL010000006.1 misc_RNA open 27171-27260 L10_leader
552 JABZJL010000006.1 GCA_015257815.1_00552 CDS open 27346-27855 510_na     169_aa rplJ 50S ribosomal protein L10
553 JABZJL010000006.1 GCA_015257815.1_00553 CDS open 27900-28265 366_na     121_aa rplL 50S ribosomal protein L7L12
554 JABZJL010000006.1 GCA_015257815.1_00554 CDS open 28406-28498 93_na     30_aa hypothetical protein
555 JABZJL010000006.1 GCA_015257815.1_00555 CDS open 28449-28949 501_na     166_aa hypothetical protein
556 JABZJL010000006.1 GCA_015257815.1_00556 CDS open 28964-29512 549_na     182_aa hypothetical protein
557 JABZJL010000006.1 GCA_015257815.1_00557 CDS open 29739-30257 519_na     172_aa hypothetical protein
558 JABZJL010000006.1 GCA_015257815.1_00558 CDS open 30717-31601 885_na     294_aa hypothetical protein
559 JABZJL010000006.1 GCA_015257815.1_00559 CDS open 31635-33062 1428_na     475_aa hypothetical protein
560 JABZJL010000006.1 GCA_015257815.1_00560 CDS open 33124-33420 297_na     98_aa Nucleoid-associated protein
561 JABZJL010000006.1 GCA_015257815.1_00561 CDS open 33440-34057 618_na     205_aa recR Recombination protein RecR
562 JABZJL010000006.1 GCA_015257815.1_00562 CDS open 34057-35040 984_na     327_aa nrnA Bifunctional oligoribonuclease and PAP phosphatase NrnA
563 JABZJL010000006.1 tRNA open 35124-35198 tRNA-Glu(ctc)
564 JABZJL010000006.1 GCA_015257815.1_00564 CDS open 35274-35489 216_na     71_aa hypothetical protein
565 JABZJL010000007.1 GCA_015257815.1_00565 CDS open 857-1291 435_na     144_aa hypothetical protein
566 JABZJL010000007.1 GCA_015257815.1_00566 CDS open 1275-1913 639_na     212_aa hypothetical protein
567 JABZJL010000007.1 GCA_015257815.1_00567 CDS open 1935-2948 1014_na     337_aa sigA RNA polymerase sigma factor SigA
568 JABZJL010000007.1 GCA_015257815.1_00568 CDS open 2935-4671 1737_na     578_aa dnaG DNA primase
569 JABZJL010000007.1 GCA_015257815.1_00569 CDS open 4775-5359 585_na     194_aa hypothetical protein
570 JABZJL010000007.1 GCA_015257815.1_00570 CDS open 5402-6319 918_na     305_aa hypothetical protein
571 JABZJL010000007.1 GCA_015257815.1_00571 CDS open 6394-6723 330_na     109_aa hypothetical protein
572 JABZJL010000007.1 GCA_015257815.1_00572 CDS open 6792-7217 426_na     141_aa hypothetical protein
573 JABZJL010000007.1 GCA_015257815.1_00573 CDS open 7217-7765 549_na     182_aa orn Oligoribonuclease
574 JABZJL010000007.1 GCA_015257815.1_00574 CDS open 7805-8485 681_na     226_aa truB tRNA pseudouridine synthase B
575 JABZJL010000007.1 GCA_015257815.1_00575 CDS open 8487-10511 2025_na     674_aa hypothetical protein
576 JABZJL010000007.1 GCA_015257815.1_00576 CDS open 10673-10927 255_na     84_aa rpsT 30S ribosomal protein S20
577 JABZJL010000007.1 GCA_015257815.1_00577 CDS open 11086-11697 612_na     203_aa hypothetical protein
578 JABZJL010000007.1 GCA_015257815.1_00578 CDS open 11831-12445 615_na     204_aa hypothetical protein
579 JABZJL010000007.1 GCA_015257815.1_00579 CDS open 12487-13575 1089_na     362_aa tsaD tRNA N6-adenosine threonylcarbamoyltransferase
580 JABZJL010000007.1 GCA_015257815.1_00580 CDS open 13682-14815 1134_na     377_aa hypothetical protein
581 JABZJL010000007.1 GCA_015257815.1_00581 CDS open 14845-17433 2589_na     862_aa valS Valine--tRNA ligase
582 JABZJL010000007.1 GCA_015257815.1_00582 CDS open 17485-17751 267_na     88_aa rpsO 30S ribosomal protein S15
583 JABZJL010000007.1 GCA_015257815.1_00583 CDS open 17888-18901 1014_na     337_aa hypothetical protein
584 JABZJL010000007.1 GCA_015257815.1_00584 CDS open 19018-20151 1134_na     377_aa hypothetical protein
585 JABZJL010000007.1 GCA_015257815.1_00585 CDS open 20280-20609 330_na     109_aa hypothetical protein
586 JABZJL010000007.1 GCA_015257815.1_00586 CDS open 20868-22994 2127_na     708_aa pnp Polyribonucleotide nucleotidyltransferase
587 JABZJL010000007.1 tRNA open 23045-23137 tRNA-Ser(gct)
588 JABZJL010000007.1 GCA_015257815.1_00588 CDS open 23211-23690 480_na     159_aa hypothetical protein
589 JABZJL010000007.1 GCA_015257815.1_00589 CDS open 23749-24981 1233_na     410_aa yknZ putative ABC transporter permease YknZ
590 JABZJL010000007.1 GCA_015257815.1_00590 CDS open 24983-25783 801_na     266_aa yknY_2 putative ABC transporter ATP-binding protein YknY
591 JABZJL010000007.1 GCA_015257815.1_00591 CDS open 25888-26346 459_na     152_aa rlmH Ribosomal RNA large subunit methyltransferase H
592 JABZJL010000007.1 GCA_015257815.1_00592 CDS open 26593-26931 339_na     112_aa hypothetical protein
593 JABZJL010000007.1 GCA_015257815.1_00593 CDS open 27188-27490 303_na     100_aa hypothetical protein
594 JABZJL010000007.1 GCA_015257815.1_00594 CDS open 27550-27951 402_na     133_aa putative HIT-like protein
595 JABZJL010000007.1 tRNA open 28071-28158 tRNA-Ser(gga)
596 JABZJL010000007.1 tRNA open 28227-28311 tRNA-Leu(tag)
597 JABZJL010000007.1 GCA_015257815.1_00597 CDS open 28398-29708 1311_na     436_aa murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase
598 JABZJL010000007.1 GCA_015257815.1_00598 CDS open 29787-30536 750_na     249_aa hypothetical protein
599 JABZJL010000008.1 GCA_015257815.1_00599 CDS open 124-1260 1137_na     378_aa hypothetical protein
600 JABZJL010000008.1 GCA_015257815.1_00600 CDS open 1387-2712 1326_na     441_aa rclA putative pyridine nucleotide-disulfide oxidoreductase RclA
601 JABZJL010000008.1 GCA_015257815.1_00601 CDS open 2778-4676 1899_na     632_aa fda Fructose-bisphosphate aldolase class 1
602 JABZJL010000008.1 GCA_015257815.1_00602 CDS open 4727-5638 912_na     303_aa hypothetical protein
603 JABZJL010000008.1 GCA_015257815.1_00603 CDS open 5795-6034 240_na     79_aa hypothetical protein
604 JABZJL010000008.1 GCA_015257815.1_00604 CDS open 6095-6352 258_na     85_aa hypothetical protein
605 JABZJL010000008.1 GCA_015257815.1_00605 CDS open 6416-6700 285_na     94_aa hypothetical protein
606 JABZJL010000008.1 GCA_015257815.1_00606 CDS open 6844-8403 1560_na     519_aa uvrC UvrABC system protein C
607 JABZJL010000008.1 GCA_015257815.1_00607 CDS open 8440-9123 684_na     227_aa hypothetical protein
608 JABZJL010000008.1 GCA_015257815.1_00608 CDS open 9193-9399 207_na     68_aa hypothetical protein
609 JABZJL010000008.1 tRNA open 9486-9561 tRNA-Met(cat)
610 JABZJL010000008.1 GCA_015257815.1_00610 CDS open 9602-10042 441_na     146_aa hypothetical protein
611 JABZJL010000008.1 tRNA open 10095-10172 tRNA-Met(cat)
612 JABZJL010000008.1 tRNA open 10287-10363 tRNA-Met(cat)
613 JABZJL010000008.1 GCA_015257815.1_00613 CDS open 10437-10550 114_na     37_aa hypothetical protein
614 JABZJL010000008.1 GCA_015257815.1_00614 CDS open 10707-11423 717_na     238_aa hypothetical protein
615 JABZJL010000008.1 GCA_015257815.1_00615 CDS open 11420-11689 270_na     89_aa hypothetical protein
616 JABZJL010000008.1 GCA_015257815.1_00616 CDS open 11701-13074 1374_na     457_aa merA Mercuric reductase
617 JABZJL010000008.1 GCA_015257815.1_00617 CDS open 13166-13873 708_na     235_aa putative transcriptional regulatory proteinMSMEI_2866
618 JABZJL010000008.1 GCA_015257815.1_00618 CDS open 13928-14620 693_na     230_aa hypothetical protein
619 JABZJL010000008.1 GCA_015257815.1_00619 CDS open 14608-15186 579_na     192_aa hypothetical protein
620 JABZJL010000008.1 GCA_015257815.1_00620 CDS open 15199-15927 729_na     242_aa gmk Guanylate kinase
621 JABZJL010000008.1 GCA_015257815.1_00621 CDS open 15973-16284 312_na     103_aa hypothetical protein
622 JABZJL010000008.1 GCA_015257815.1_00622 CDS open 16593-16934 342_na     113_aa hypothetical protein
623 JABZJL010000008.1 GCA_015257815.1_00623 CDS open 17083-17826 744_na     247_aa hrcA Heat-inducible transcription repressor HrcA
624 JABZJL010000008.1 GCA_015257815.1_00624 CDS open 17841-18464 624_na     207_aa azoR FMN-dependent NADH-azoreductase
625 JABZJL010000008.1 GCA_015257815.1_00625 CDS open 18475-19002 528_na     175_aa grpE Protein GrpE
626 JABZJL010000008.1 GCA_015257815.1_00626 CDS open 19247-21610 2364_na     787_aa xfp Xylulose-5-phosphatefructose-6-phosphate phosphoketolase
627 JABZJL010000008.1 GCA_015257815.1_00627 CDS open 21661-21825 165_na     54_aa hypothetical protein
628 JABZJL010000008.1 GCA_015257815.1_00628 CDS open 22277-24157 1881_na     626_aa dnaK Chaperone protein DnaK
629 JABZJL010000008.1 GCA_015257815.1_00629 CDS open 24452-24589 138_na     45_aa hypothetical protein
630 JABZJL010000008.1 GCA_015257815.1_00630 CDS open 24632-25732 1101_na     366_aa dnaJ Chaperone protein DnaJ
631 JABZJL010000008.1 GCA_015257815.1_00631 CDS open 25762-26226 465_na     154_aa hypothetical protein
632 JABZJL010000008.1 tRNA open 26272-26348 tRNA-Lys(ttt)
633 JABZJL010000008.1 GCA_015257815.1_00633 CDS open 26406-26777 372_na     123_aa hypothetical protein
634 JABZJL010000008.1 GCA_015257815.1_00634 CDS open 26777-27004 228_na     75_aa hypothetical protein
635 JABZJL010000008.1 GCA_015257815.1_00635 CDS open 27012-28859 1848_na     615_aa hypothetical protein
636 JABZJL010000008.1 tRNA open 28884-28970 tRNA-Leu(gag)
637 JABZJL010000009.1 GCA_015257815.1_00637 CDS open 222-497 276_na     91_aa hypothetical protein
638 JABZJL010000009.1 GCA_015257815.1_00638 CDS open 497-2281 1785_na     594_aa Fatty acid ABC transporter ATP-bindingpermease protein
639 JABZJL010000009.1 GCA_015257815.1_00639 CDS open 2333-2704 372_na     123_aa hypothetical protein
640 JABZJL010000009.1 tRNA open 2898-2973 tRNA-Trp(cca)
641 JABZJL010000009.1 GCA_015257815.1_00641 CDS open 3495-4187 693_na     230_aa hypothetical protein
642 JABZJL010000009.1 GCA_015257815.1_00642 CDS open 4276-5499 1224_na     407_aa Glycogen synthase
643 JABZJL010000009.1 GCA_015257815.1_00643 CDS open 5492-6841 1350_na     449_aa hypothetical protein
644 JABZJL010000009.1 GCA_015257815.1_00644 CDS open 6843-8804 1962_na     653_aa hypothetical protein
645 JABZJL010000009.1 GCA_015257815.1_00645 CDS open 8850-9056 207_na     68_aa hypothetical protein
646 JABZJL010000009.1 GCA_015257815.1_00646 CDS open 9480-9662 183_na     60_aa hypothetical protein
647 JABZJL010000009.1 tRNA open 9803-9878 tRNA-Thr(ggt)
648 JABZJL010000009.1 GCA_015257815.1_00648 CDS open 9903-10757 855_na     284_aa hypothetical protein
649 JABZJL010000009.1 GCA_015257815.1_00649 CDS open 10796-11392 597_na     198_aa hypothetical protein
650 JABZJL010000009.1 GCA_015257815.1_00650 CDS open 11505-11969 465_na     154_aa rplO 50S ribosomal protein L15
651 JABZJL010000009.1 GCA_015257815.1_00651 CDS open 11969-12556 588_na     195_aa hypothetical protein
652 JABZJL010000009.1 GCA_015257815.1_00652 CDS open 12559-12915 357_na     118_aa rplR 50S ribosomal protein L18
653 JABZJL010000009.1 GCA_015257815.1_00653 CDS open 12915-13451 537_na     178_aa rplF 50S ribosomal protein L6
654 JABZJL010000009.1 GCA_015257815.1_00654 CDS open 13685-14947 1263_na     420_aa hypothetical protein
655 JABZJL010000009.1 GCA_015257815.1_00655 CDS open 14986-16743 1758_na     585_aa hypothetical protein
656 JABZJL010000009.1 GCA_015257815.1_00656 CDS open 16873-17598 726_na     241_aa hypothetical protein
657 JABZJL010000009.1 GCA_015257815.1_00657 CDS open 17654-19987 2334_na     777_aa ctpE_2 Calcium-transporting ATPase CtpE
658 JABZJL010000009.1 GCA_015257815.1_00658 CDS open 20045-20713 669_na     222_aa hypothetical protein
659 JABZJL010000009.1 GCA_015257815.1_00659 CDS open 20753-21544 792_na     263_aa hypothetical protein
660 JABZJL010000009.1 GCA_015257815.1_00660 CDS open 21537-22730 1194_na     397_aa hypothetical protein
661 JABZJL010000009.1 GCA_015257815.1_00661 CDS open 22717-23757 1041_na     346_aa trpS2 Tryptophan--tRNA ligase 2
662 JABZJL010000009.1 GCA_015257815.1_00662 CDS open 23754-24725 972_na     323_aa menH_2 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase
663 JABZJL010000009.1 GCA_015257815.1_00663 CDS open 24667-25068 402_na     133_aa rpsH 30S ribosomal protein S8
664 JABZJL010000009.1 GCA_015257815.1_00664 CDS open 25084-25353 270_na     89_aa rpsN2 Alternate 30S ribosomal protein S14
665 JABZJL010000009.1 GCA_015257815.1_00665 CDS open 25353-25931 579_na     192_aa rplE 50S ribosomal protein L5
666 JABZJL010000009.1 GCA_015257815.1_00666 CDS open 25931-26194 264_na     87_aa rplX 50S ribosomal protein L24
667 JABZJL010000009.1 GCA_015257815.1_00667 CDS open 26196-26564 369_na     122_aa rplN 50S ribosomal protein L14
668 JABZJL010000009.1 GCA_015257815.1_00668 CDS open 26564-26833 270_na     89_aa rpsQ 30S ribosomal protein S17
669 JABZJL010000009.1 GCA_015257815.1_00669 CDS open 26835-27254 420_na     139_aa rplP 50S ribosomal protein L16
670 JABZJL010000009.1 GCA_015257815.1_00670 CDS open 27254-27889 636_na     211_aa rpsC 30S ribosomal protein S3
671 JABZJL010000009.1 GCA_015257815.1_00671 CDS open 27889-28077 189_na     62_aa hypothetical protein