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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Bifidobacterium longum (GCA_017132775.1)

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PROKKA Annotations for GCA_017132775.1
Genome Selected: Bifidobacterium longum
ContigsBases CDSrRNA tmRNAtRNA
1 2403825 1965 8 1 80
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Annotation Table [page:5]    |    Number of Records Found: 2067 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CP070995.1 tRNA open 2335094-2335169 tRNA-Gly(gcc)
2002 CP070995.1 tRNA open 2335200-2335273 tRNA-Val(cac)
2003 CP070995.1 tRNA open 2335321-2335393 tRNA-Val(gac)
2004 CP070995.1 tRNA open 2335434-2335505 tRNA-Cys(gca)
2005 CP070995.1 tRNA open 2335532-2335605 tRNA-Gly(gcc)
2006 CP070995.1 GCA_017132775.1_02006 CDS open 2335741-2336598 858_na     285_aa hypothetical protein
2007 CP070995.1 GCA_017132775.1_02007 CDS open 2336813-2337697 885_na     294_aa uppP Undecaprenyl-diphosphatase
2008 CP070995.1 GCA_017132775.1_02008 CDS open 2337842-2338633 792_na     263_aa putative ketoamine kinase
2009 CP070995.1 GCA_017132775.1_02009 CDS open 2338680-2339825 1146_na     381_aa dnaJ2 Chaperone protein DnaJ 2
2010 CP070995.1 GCA_017132775.1_02010 CDS open 2339881-2340999 1119_na     372_aa hrcA Heat-inducible transcription repressor HrcA
2011 CP070995.1 GCA_017132775.1_02011 CDS open 2341374-2343482 2109_na     702_aa tkt Transketolase
2012 CP070995.1 GCA_017132775.1_02012 CDS open 2343655-2344758 1104_na     367_aa tal Transaldolase
2013 CP070995.1 GCA_017132775.1_02013 CDS open 2344888-2346225 1338_na     445_aa brnQ Branched-chain amino acid transport system 2 carrier protein
2014 CP070995.1 GCA_017132775.1_02014 CDS open 2346397-2347506 1110_na     369_aa hypothetical protein
2015 CP070995.1 GCA_017132775.1_02015 CDS open 2347493-2347582 90_na     29_aa hypothetical protein
2016 CP070995.1 GCA_017132775.1_02016 CDS open 2347635-2349191 1557_na     518_aa dapL_2 LL-diaminopimelate aminotransferase
2017 CP070995.1 GCA_017132775.1_02017 CDS open 2349302-2350153 852_na     283_aa ywpJ_2 Phosphatase YwpJ
2018 CP070995.1 GCA_017132775.1_02018 CDS open 2350150-2351100 951_na     316_aa ldh L-lactate dehydrogenase
2019 CP070995.1 GCA_017132775.1_02019 CDS open 2351202-2351450 249_na     82_aa secG putative protein-export membrane protein SecG
2020 CP070995.1 GCA_017132775.1_02020 CDS open 2351514-2352317 804_na     267_aa tpiA Triosephosphate isomerase
2021 CP070995.1 GCA_017132775.1_02021 CDS open 2352373-2353578 1206_na     401_aa pgk Phosphoglycerate kinase
2022 CP070995.1 GCA_017132775.1_02022 CDS open 2353747-2354697 951_na     316_aa whiA putative cell division protein WhiA
2023 CP070995.1 GCA_017132775.1_02023 CDS open 2354896-2355882 987_na     328_aa Nucleotide-binding protein
2024 CP070995.1 GCA_017132775.1_02024 CDS open 2355882-2356853 972_na     323_aa aroE Shikimate dehydrogenase (NADP(+))
2025 CP070995.1 GCA_017132775.1_02025 CDS open 2356962-2359328 2367_na     788_aa uvrC UvrABC system protein C
2026 CP070995.1 GCA_017132775.1_02026 CDS open 2359478-2362507 3030_na     1009_aa uvrA_2 UvrABC system protein A
2027 CP070995.1 GCA_017132775.1_02027 CDS open 2362778-2363344 567_na     188_aa hypothetical protein
2028 CP070995.1 GCA_017132775.1_02028 CDS open 2363511-2364695 1185_na     394_aa hypothetical protein
2029 CP070995.1 GCA_017132775.1_02029 CDS open 2364769-2368314 3546_na     1181_aa hypothetical protein
2030 CP070995.1 GCA_017132775.1_02030 CDS open 2368314-2368988 675_na     224_aa hypothetical protein
2031 CP070995.1 GCA_017132775.1_02031 CDS open 2368985-2370616 1632_na     543_aa hypothetical protein
2032 CP070995.1 GCA_017132775.1_02032 CDS open 2370818-2371465 648_na     215_aa hypothetical protein
2033 CP070995.1 GCA_017132775.1_02033 CDS open 2371465-2372166 702_na     233_aa ecfT_3 Energy-coupling factor transporter transmembrane protein EcfT
2034 CP070995.1 GCA_017132775.1_02034 CDS open 2372166-2373779 1614_na     537_aa ykoD_2 Putative HMPthiamine import ATP-binding protein YkoD
2035 CP070995.1 GCA_017132775.1_02035 CDS open 2373776-2374447 672_na     223_aa hypothetical protein
2036 CP070995.1 GCA_017132775.1_02036 CDS open 2374500-2374868 369_na     122_aa hypothetical protein
2037 CP070995.1 GCA_017132775.1_02037 CDS open 2374939-2375646 708_na     235_aa lvr Levodione reductase
2038 CP070995.1 GCA_017132775.1_02038 CDS open 2375690-2377291 1602_na     533_aa ybiT putative ABC transporter ATP-binding protein YbiT
2039 CP070995.1 GCA_017132775.1_02039 CDS open 2377387-2377542 156_na     51_aa hypothetical protein
2040 CP070995.1 GCA_017132775.1_02040 CDS open 2377607-2379163 1557_na     518_aa trpE Anthranilate synthase component 1
2041 CP070995.1 GCA_017132775.1_02041 CDS open 2379244-2379639 396_na     131_aa hisI Phosphoribosyl-AMP cyclohydrolase
2042 CP070995.1 GCA_017132775.1_02042 CDS open 2379773-2380543 771_na     256_aa hisF Imidazole glycerol phosphate synthase subunit HisF
2043 CP070995.1 GCA_017132775.1_02043 CDS open 2380718-2381266 549_na     182_aa yfkM General stress protein 18
2044 CP070995.1 GCA_017132775.1_02044 CDS open 2381267-2382436 1170_na     389_aa rlmN putative dual-specificity RNA methyltransferase RlmN
2045 CP070995.1 GCA_017132775.1_02045 CDS open 2382647-2383633 987_na     328_aa cdsA Phosphatidate cytidylyltransferase
2046 CP070995.1 GCA_017132775.1_02046 CDS open 2383656-2384207 552_na     183_aa frr Ribosome-recycling factor
2047 CP070995.1 GCA_017132775.1_02047 CDS open 2384284-2385024 741_na     246_aa pyrH Uridylate kinase
2048 CP070995.1 GCA_017132775.1_02048 CDS open 2385198-2386049 852_na     283_aa tsf Elongation factor Ts
2049 CP070995.1 GCA_017132775.1_02049 CDS open 2386128-2386973 846_na     281_aa rpsB 30S ribosomal protein S2
2050 CP070995.1 GCA_017132775.1_02050 CDS open 2387328-2387816 489_na     162_aa def_3 Peptide deformylase
2051 CP070995.1 GCA_017132775.1_02051 CDS open 2387823-2389919 2097_na     698_aa Long-chain-fatty-acid--CoA ligase FadD15
2052 CP070995.1 GCA_017132775.1_02052 CDS open 2390010-2390501 492_na     163_aa hypothetical protein
2053 CP070995.1 GCA_017132775.1_02053 CDS open 2390663-2391787 1125_na     374_aa putative oxidoreductaseMSMEI_1564
2054 CP070995.1 GCA_017132775.1_02054 CDS open 2391915-2393135 1221_na     406_aa icd_2 Isocitrate dehydrogenase [NADP]
2055 CP070995.1 GCA_017132775.1_02055 CDS open 2393384-2395015 1632_na     543_aa hypothetical protein
2056 CP070995.1 GCA_017132775.1_02056 CDS open 2395093-2395782 690_na     229_aa hypothetical protein
2057 CP070995.1 tRNA open 2396291-2396364 tRNA-Asn(gtt)
2058 CP070995.1 tRNA open 2396407-2396480 tRNA-Asn(gtt)
2059 CP070995.1 tRNA open 2396523-2396598 tRNA-Asn(gtt)
2060 CP070995.1 GCA_017132775.1_02060 CDS open 2396789-2397832 1044_na     347_aa tsaD_2 tRNA N6-adenosine threonylcarbamoyltransferase
2061 CP070995.1 GCA_017132775.1_02061 CDS open 2397829-2398422 594_na     197_aa hypothetical protein
2062 CP070995.1 GCA_017132775.1_02062 CDS open 2398400-2399281 882_na     293_aa hypothetical protein
2063 CP070995.1 GCA_017132775.1_02063 CDS open 2399343-2399909 567_na     188_aa tsaE_2 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
2064 CP070995.1 GCA_017132775.1_02064 CDS open 2399930-2400901 972_na     323_aa hypothetical protein
2065 CP070995.1 GCA_017132775.1_02065 CDS open 2401116-2402027 912_na     303_aa hypothetical protein
2066 CP070995.1 GCA_017132775.1_02066 CDS open 2402451-2403059 609_na     202_aa hypothetical protein
2067 CP070995.1 GCA_017132775.1_02067 CDS open 2403089-2403376 288_na     95_aa hypothetical protein