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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Bifidobacterium dentium (GCA_017743195.1)

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PROKKA Annotations for GCA_017743195.1
Genome Selected: Bifidobacterium dentium
ContigsBases CDSrRNA tmRNAtRNA
1 2535489 2055 9 1 57
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Annotation Table [page:5]    |    Number of Records Found: 2131 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CP072502.1 GCA_017743195.1_02001 CDS open 2353478-2354692 1215_na     404_aa anmK Anhydro-N-acetylmuramic acid kinase
2002 CP072502.1 GCA_017743195.1_02002 CDS open 2354918-2355961 1044_na     347_aa cytR_7 HTH-type transcriptional repressor CytR
2003 CP072502.1 GCA_017743195.1_02003 CDS open 2356147-2356458 312_na     103_aa hypothetical protein
2004 CP072502.1 GCA_017743195.1_02004 CDS open 2356471-2358924 2454_na     817_aa hypothetical protein
2005 CP072502.1 GCA_017743195.1_02005 CDS open 2359155-2359892 738_na     245_aa hypothetical protein
2006 CP072502.1 GCA_017743195.1_02006 CDS open 2360031-2362196 2166_na     721_aa hypBA1 Non-reducing end beta-L-arabinofuranosidase
2007 CP072502.1 GCA_017743195.1_02007 CDS open 2362193-2362903 711_na     236_aa hypothetical protein
2008 CP072502.1 GCA_017743195.1_02008 CDS open 2363070-2363411 342_na     113_aa hypothetical protein
2009 CP072502.1 GCA_017743195.1_02009 CDS open 2363458-2364564 1107_na     368_aa hypothetical protein
2010 CP072502.1 GCA_017743195.1_02010 CDS open 2364678-2365640 963_na     320_aa araQ_5 L-arabinose transport system permease protein AraQ
2011 CP072502.1 GCA_017743195.1_02011 CDS open 2365671-2366639 969_na     322_aa yteP_2 putative multiple-sugar transport system permease YteP
2012 CP072502.1 GCA_017743195.1_02012 CDS open 2366718-2367914 1197_na     398_aa hypothetical protein
2013 CP072502.1 GCA_017743195.1_02013 CDS open 2368195-2369298 1104_na     367_aa ccpA_5 Catabolite control protein A
2014 CP072502.1 GCA_017743195.1_02014 CDS open 2369455-2371461 2007_na     668_aa uidA Beta-glucuronidase
2015 CP072502.1 GCA_017743195.1_02015 CDS open 2371879-2373666 1788_na     595_aa putative ABC transporter ATP-binding protein
2016 CP072502.1 GCA_017743195.1_02016 CDS open 2373682-2375562 1881_na     626_aa putative ABC transporter ATP-binding protein
2017 CP072502.1 GCA_017743195.1_02017 CDS open 2375943-2377025 1083_na     360_aa hypothetical protein
2018 CP072502.1 GCA_017743195.1_02018 CDS open 2377199-2378674 1476_na     491_aa xylT D-xylose transporter
2019 CP072502.1 GCA_017743195.1_02019 CDS open 2379307-2381445 2139_na     712_aa lacZ_2 Beta-galactosidase
2020 CP072502.1 GCA_017743195.1_02020 CDS open 2381871-2383733 1863_na     620_aa metG Methionine--tRNA ligase
2021 CP072502.1 GCA_017743195.1_02021 CDS open 2383888-2384523 636_na     211_aa hypothetical protein
2022 CP072502.1 GCA_017743195.1_02022 CDS open 2384576-2384824 249_na     82_aa hypothetical protein
2023 CP072502.1 GCA_017743195.1_02023 CDS open 2384814-2385812 999_na     332_aa rsmI Ribosomal RNA small subunit methyltransferase I
2024 CP072502.1 GCA_017743195.1_02024 CDS open 2385874-2387577 1704_na     567_aa pmt putative dolichyl-phosphate-mannose--protein mannosyltransferase
2025 CP072502.1 GCA_017743195.1_02025 CDS open 2387700-2388923 1224_na     407_aa manA_2 Mannan endo-1%2C4-beta-mannosidase
2026 CP072502.1 GCA_017743195.1_02026 CDS open 2389263-2391767 2505_na     834_aa cbpA_1 Cellobiose phosphorylase
2027 CP072502.1 GCA_017743195.1_02027 CDS open 2391878-2392699 822_na     273_aa hypothetical protein
2028 CP072502.1 GCA_017743195.1_02028 CDS open 2392789-2394540 1752_na     583_aa hypothetical protein
2029 CP072502.1 GCA_017743195.1_02029 CDS open 2394671-2394838 168_na     55_aa hypothetical protein
2030 CP072502.1 GCA_017743195.1_02030 CDS open 2394816-2395847 1032_na     343_aa ccpA_6 Catabolite control protein A
2031 CP072502.1 GCA_017743195.1_02031 CDS open 2396029-2396820 792_na     263_aa hypothetical protein
2032 CP072502.1 GCA_017743195.1_02032 CDS open 2396853-2398205 1353_na     450_aa gabD1 Succinate-semialdehyde dehydrogenase [NADP(+)] 1
2033 CP072502.1 GCA_017743195.1_02033 CDS open 2398224-2399015 792_na     263_aa ydcV Inner membrane ABC transporter permease protein YdcV
2034 CP072502.1 GCA_017743195.1_02034 CDS open 2399031-2399906 876_na     291_aa ydcU Inner membrane ABC transporter permease protein YdcU
2035 CP072502.1 GCA_017743195.1_02035 CDS open 2399912-2401111 1200_na     399_aa ydcS Bifunctional polyhydroxybutyrate synthase ABC transporter periplasmic binding protein
2036 CP072502.1 GCA_017743195.1_02036 CDS open 2401148-2402152 1005_na     334_aa btuD_15 Vitamin B12 import ATP-binding protein BtuD
2037 CP072502.1 GCA_017743195.1_02037 CDS open 2402294-2403784 1491_na     496_aa hypothetical protein
2038 CP072502.1 GCA_017743195.1_02038 CDS open 2404002-2404703 702_na     233_aa hypothetical protein
2039 CP072502.1 misc_RNA open 2404765-2404867 TPP
2040 CP072502.1 GCA_017743195.1_02040 CDS open 2405086-2406225 1140_na     379_aa hypothetical protein
2041 CP072502.1 GCA_017743195.1_02041 CDS open 2406348-2407682 1335_na     444_aa gabT 4-aminobutyrate aminotransferase
2042 CP072502.1 GCA_017743195.1_02042 CDS open 2407831-2409465 1635_na     544_aa hypothetical protein
2043 CP072502.1 GCA_017743195.1_02043 CDS open 2409499-2410455 957_na     318_aa nanK_3 N-acetylmannosamine kinase
2044 CP072502.1 GCA_017743195.1_02044 CDS open 2410490-2412517 2028_na     675_aa bgaP Beta-galactosidase BgaP
2045 CP072502.1 GCA_017743195.1_02045 CDS open 2412574-2414085 1512_na     503_aa Non-reducing end alpha-L-arabinofuranosidase BoGH43A
2046 CP072502.1 GCA_017743195.1_02046 CDS open 2414116-2415207 1092_na     363_aa celCCA Endoglucanase A
2047 CP072502.1 GCA_017743195.1_02047 CDS open 2415304-2417748 2445_na     814_aa hypothetical protein
2048 CP072502.1 GCA_017743195.1_02048 CDS open 2418005-2420035 2031_na     676_aa yicI_1 Alpha-xylosidase
2049 CP072502.1 GCA_017743195.1_02049 CDS open 2420148-2422277 2130_na     709_aa Beta-glucosidase BoGH3A
2050 CP072502.1 GCA_017743195.1_02050 CDS open 2422346-2423839 1494_na     497_aa hypothetical protein
2051 CP072502.1 GCA_017743195.1_02051 CDS open 2423832-2424506 675_na     224_aa axe2 Acetylxylan esterase
2052 CP072502.1 GCA_017743195.1_02052 CDS open 2424677-2426464 1788_na     595_aa hypothetical protein
2053 CP072502.1 GCA_017743195.1_02053 CDS open 2426588-2427520 933_na     310_aa araQ_6 L-arabinose transport system permease protein AraQ
2054 CP072502.1 GCA_017743195.1_02054 CDS open 2427545-2428579 1035_na     344_aa yteP_3 putative multiple-sugar transport system permease YteP
2055 CP072502.1 GCA_017743195.1_02055 CDS open 2428783-2429445 663_na     220_aa hypothetical protein
2056 CP072502.1 GCA_017743195.1_02056 CDS open 2429755-2432172 2418_na     805_aa yicI_2 Alpha-xylosidase
2057 CP072502.1 GCA_017743195.1_02057 CDS open 2432266-2433126 861_na     286_aa dasC_2 Diacetylchitobiose uptake system permease protein DasC
2058 CP072502.1 GCA_017743195.1_02058 CDS open 2433131-2434102 972_na     323_aa melD_4 Melibioseraffinosestachyose import permease protein MelD
2059 CP072502.1 GCA_017743195.1_02059 CDS open 2434248-2435561 1314_na     437_aa dasA_2 Diacetylchitobiose binding protein DasA
2060 CP072502.1 GCA_017743195.1_02060 CDS open 2435713-2436732 1020_na     339_aa ccpA_7 Catabolite control protein A
2061 CP072502.1 GCA_017743195.1_02061 CDS open 2436975-2438120 1146_na     381_aa hypothetical protein
2062 CP072502.1 GCA_017743195.1_02062 CDS open 2438222-2439100 879_na     292_aa lacG_3 Lactose transport system permease protein LacG
2063 CP072502.1 GCA_017743195.1_02063 CDS open 2439117-2440055 939_na     312_aa melD_5 Melibioseraffinosestachyose import permease protein MelD
2064 CP072502.1 GCA_017743195.1_02064 CDS open 2440160-2441467 1308_na     435_aa msmE Multiple sugar-binding protein
2065 CP072502.1 GCA_017743195.1_02065 CDS open 2441674-2442723 1050_na     349_aa ccpA_8 Catabolite control protein A
2066 CP072502.1 GCA_017743195.1_02066 CDS open 2443433-2444110 678_na     225_aa dedA Protein DedA
2067 CP072502.1 tRNA open 2444273-2444346 tRNA-Ala(cgc)
2068 CP072502.1 GCA_017743195.1_02068 CDS open 2444486-2445193 708_na     235_aa gph_1 Phosphoglycolate phosphatase
2069 CP072502.1 GCA_017743195.1_02069 CDS open 2445359-2445652 294_na     97_aa hypothetical protein
2070 CP072502.1 GCA_017743195.1_02070 CDS open 2445914-2446477 564_na     187_aa hypothetical protein
2071 CP072502.1 GCA_017743195.1_02071 CDS open 2446483-2447508 1026_na     341_aa cbpA_2 Curved DNA-binding protein
2072 CP072502.1 GCA_017743195.1_02072 CDS open 2447539-2448189 651_na     216_aa grpE Protein GrpE
2073 CP072502.1 GCA_017743195.1_02073 CDS open 2448192-2450063 1872_na     623_aa dnaK Chaperone protein DnaK
2074 CP072502.1 GCA_017743195.1_02074 CDS open 2450467-2452560 2094_na     697_aa hypothetical protein
2075 CP072502.1 GCA_017743195.1_02075 CDS open 2452816-2455365 2550_na     849_aa hypothetical protein
2076 CP072502.1 GCA_017743195.1_02076 CDS open 2455379-2456200 822_na     273_aa araQ_7 L-arabinose transport system permease protein AraQ
2077 CP072502.1 GCA_017743195.1_02077 CDS open 2456197-2457084 888_na     295_aa ngcF_2 Diacetylchitobiose uptake system permease protein NgcF
2078 CP072502.1 GCA_017743195.1_02078 CDS open 2457245-2458633 1389_na     462_aa hypothetical protein
2079 CP072502.1 GCA_017743195.1_02079 CDS open 2458904-2459920 1017_na     338_aa galR HTH-type transcriptional regulator GalR
2080 CP072502.1 GCA_017743195.1_02080 CDS open 2460000-2460914 915_na     304_aa hypothetical protein
2081 CP072502.1 GCA_017743195.1_02081 CDS open 2460998-2462047 1050_na     349_aa hypothetical protein
2082 CP072502.1 GCA_017743195.1_02082 CDS open 2462133-2462474 342_na     113_aa hypothetical protein
2083 CP072502.1 GCA_017743195.1_02083 CDS open 2462803-2464518 1716_na     571_aa hypothetical protein
2084 CP072502.1 GCA_017743195.1_02084 CDS open 2464626-2468057 3432_na     1143_aa hypothetical protein
2085 CP072502.1 GCA_017743195.1_02085 CDS open 2468697-2469728 1032_na     343_aa ccpA_9 Catabolite control protein A
2086 CP072502.1 GCA_017743195.1_02086 CDS open 2469885-2470679 795_na     264_aa hypothetical protein
2087 CP072502.1 GCA_017743195.1_02087 CDS open 2470691-2471482 792_na     263_aa gph_2 Phosphoglycolate phosphatase
2088 CP072502.1 GCA_017743195.1_02088 CDS open 2471511-2473559 2049_na     682_aa pulA Pullulanase
2089 CP072502.1 GCA_017743195.1_02089 CDS open 2473564-2474463 900_na     299_aa ycjP Inner membrane ABC transporter permease protein YcjP
2090 CP072502.1 GCA_017743195.1_02090 CDS open 2474460-2475863 1404_na     467_aa hypothetical protein
2091 CP072502.1 GCA_017743195.1_02091 CDS open 2476156-2477394 1239_na     412_aa cycB Cyclodextrin-binding protein
2092 CP072502.1 GCA_017743195.1_02092 CDS open 2477633-2479243 1611_na     536_aa malL_3 Oligo-1%2C6-glucosidase 1
2093 CP072502.1 GCA_017743195.1_02093 CDS open 2479495-2481660 2166_na     721_aa malQ_2 4-alpha-glucanotransferase
2094 CP072502.1 GCA_017743195.1_02094 CDS open 2481774-2483534 1761_na     586_aa malL_4 Oligo-1%2C6-glucosidase
2095 CP072502.1 GCA_017743195.1_02095 CDS open 2483663-2484274 612_na     203_aa hypothetical protein
2096 CP072502.1 GCA_017743195.1_02096 CDS open 2484360-2485202 843_na     280_aa araQ_8 L-arabinose transport system permease protein AraQ
2097 CP072502.1 GCA_017743195.1_02097 CDS open 2485199-2486053 855_na     284_aa melD_6 Melibioseraffinosestachyose import permease protein MelD
2098 CP072502.1 GCA_017743195.1_02098 CDS open 2486389-2487399 1011_na     336_aa cytR_8 HTH-type transcriptional repressor CytR
2099 CP072502.1 GCA_017743195.1_02099 CDS open 2487625-2488971 1347_na     448_aa hypothetical protein
2100 CP072502.1 GCA_017743195.1_02100 CDS open 2489491-2490195 705_na     234_aa gpmA_4 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
2101 CP072502.1 GCA_017743195.1_02101 CDS open 2490375-2490704 330_na     109_aa hypothetical protein
2102 CP072502.1 GCA_017743195.1_02102 CDS open 2490713-2491303 591_na     196_aa hypothetical protein
2103 CP072502.1 GCA_017743195.1_02103 CDS open 2491303-2493696 2394_na     797_aa Beta-galactosidase BoGH2A
2104 CP072502.1 GCA_017743195.1_02104 CDS open 2493807-2494214 408_na     135_aa hypothetical protein
2105 CP072502.1 GCA_017743195.1_02105 CDS open 2494224-2497274 3051_na     1016_aa hypothetical protein
2106 CP072502.1 GCA_017743195.1_02106 CDS open 2497468-2498175 708_na     235_aa hypothetical protein
2107 CP072502.1 GCA_017743195.1_02107 CDS open 2498172-2499473 1302_na     433_aa hypothetical protein
2108 CP072502.1 GCA_017743195.1_02108 CDS open 2499513-2500301 789_na     262_aa nfrA NADPH-dependent oxidoreductase
2109 CP072502.1 GCA_017743195.1_02109 CDS open 2500477-2500734 258_na     85_aa hypothetical protein
2110 CP072502.1 rRNA open 2501304-2504355 23S ribosomal RNA
2111 CP072502.1 rRNA open 2504820-2506347 16S ribosomal RNA
2112 CP072502.1 GCA_017743195.1_02112 CDS open 2507026-2509932 2907_na     968_aa hypothetical protein
2113 CP072502.1 GCA_017743195.1_02113 CDS open 2510219-2512216 1998_na     665_aa pknD_2 Serinethreonine-protein kinase PknD
2114 CP072502.1 GCA_017743195.1_02114 CDS open 2512354-2513334 981_na     326_aa hypothetical protein
2115 CP072502.1 tRNA open 2513451-2513525 tRNA-Thr(tgt)
2116 CP072502.1 GCA_017743195.1_02116 CDS open 2513831-2515234 1404_na     467_aa hypothetical protein
2117 CP072502.1 GCA_017743195.1_02117 CDS open 2515234-2516184 951_na     316_aa ksgA Ribosomal RNA small subunit methyltransferase A
2118 CP072502.1 GCA_017743195.1_02118 CDS open 2516181-2517080 900_na     299_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2119 CP072502.1 GCA_017743195.1_02119 CDS open 2517125-2517763 639_na     212_aa hypothetical protein
2120 CP072502.1 GCA_017743195.1_02120 CDS open 2517826-2519415 1590_na     529_aa cca CCA-adding enzyme
2121 CP072502.1 GCA_017743195.1_02121 CDS open 2519493-2520188 696_na     231_aa rppH RNA pyrophosphohydrolase
2122 CP072502.1 GCA_017743195.1_02122 CDS open 2520188-2522293 2106_na     701_aa hypothetical protein
2123 CP072502.1 GCA_017743195.1_02123 CDS open 2522290-2526006 3717_na     1238_aa murJ lipid II flippase MurJ
2124 CP072502.1 GCA_017743195.1_02124 CDS open 2526152-2527885 1734_na     577_aa alsS Acetolactate synthase
2125 CP072502.1 GCA_017743195.1_02125 CDS open 2528033-2528998 966_na     321_aa trxB Thioredoxin reductase
2126 CP072502.1 GCA_017743195.1_02126 CDS open 2529192-2530499 1308_na     435_aa noc Nucleoid occlusion protein
2127 CP072502.1 GCA_017743195.1_02127 CDS open 2530502-2531482 981_na     326_aa Iron-sulfur cluster carrier protein
2128 CP072502.1 GCA_017743195.1_02128 CDS open 2531715-2532464 750_na     249_aa rsmG Ribosomal RNA small subunit methyltransferase G
2129 CP072502.1 GCA_017743195.1_02129 CDS open 2532662-2533207 546_na     181_aa hypothetical protein
2130 CP072502.1 GCA_017743195.1_02130 CDS open 2533327-2534337 1011_na     336_aa yidC Membrane protein insertase YidC
2131 CP072502.1 GCA_017743195.1_02131 CDS open 2535040-2535174 135_na     44_aa rpmH 50S ribosomal protein L34