HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Bifidobacterium dentium (GCA_017743215.1)

Select a Genome:
PROKKA Annotations for GCA_017743215.1
Genome Selected: Bifidobacterium dentium
ContigsBases CDSrRNA tmRNAtRNA
1 2552511 2050 9 1 58
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 2127 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2127 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CP072503.1 GCA_017743215.1_02001 CDS open 2383925-2385232 1308_na     435_aa msmE Multiple sugar-binding protein
2002 CP072503.1 GCA_017743215.1_02002 CDS open 2385439-2386488 1050_na     349_aa ccpA_7 Catabolite control protein A
2003 CP072503.1 GCA_017743215.1_02003 CDS open 2387198-2387875 678_na     225_aa dedA Protein DedA
2004 CP072503.1 tRNA open 2388038-2388111 tRNA-Ala(cgc)
2005 CP072503.1 GCA_017743215.1_02005 CDS open 2388251-2388958 708_na     235_aa gph_1 Phosphoglycolate phosphatase
2006 CP072503.1 GCA_017743215.1_02006 CDS open 2389124-2389417 294_na     97_aa hypothetical protein
2007 CP072503.1 GCA_017743215.1_02007 CDS open 2389679-2390242 564_na     187_aa hypothetical protein
2008 CP072503.1 GCA_017743215.1_02008 CDS open 2390248-2391273 1026_na     341_aa cbpA_2 Curved DNA-binding protein
2009 CP072503.1 GCA_017743215.1_02009 CDS open 2391304-2391954 651_na     216_aa grpE Protein GrpE
2010 CP072503.1 GCA_017743215.1_02010 CDS open 2391957-2393828 1872_na     623_aa dnaK Chaperone protein DnaK
2011 CP072503.1 GCA_017743215.1_02011 CDS open 2394233-2396326 2094_na     697_aa hypothetical protein
2012 CP072503.1 GCA_017743215.1_02012 CDS open 2396582-2399131 2550_na     849_aa hypothetical protein
2013 CP072503.1 GCA_017743215.1_02013 CDS open 2399145-2399414 270_na     89_aa hypothetical protein
2014 CP072503.1 GCA_017743215.1_02014 CDS open 2399411-2399698 288_na     95_aa hypothetical protein
2015 CP072503.1 GCA_017743215.1_02015 CDS open 2399710-2400726 1017_na     338_aa cytR_6 HTH-type transcriptional repressor CytR
2016 CP072503.1 GCA_017743215.1_02016 CDS open 2400805-2401668 864_na     287_aa hypothetical protein
2017 CP072503.1 GCA_017743215.1_02017 CDS open 2401942-2402970 1029_na     342_aa ccpA_8 Catabolite control protein A
2018 CP072503.1 GCA_017743215.1_02018 CDS open 2403127-2403921 795_na     264_aa hypothetical protein
2019 CP072503.1 GCA_017743215.1_02019 CDS open 2403933-2404724 792_na     263_aa gph_2 Phosphoglycolate phosphatase
2020 CP072503.1 GCA_017743215.1_02020 CDS open 2404753-2406801 2049_na     682_aa pulA Pullulanase
2021 CP072503.1 GCA_017743215.1_02021 CDS open 2406806-2407705 900_na     299_aa ycjP Inner membrane ABC transporter permease protein YcjP
2022 CP072503.1 GCA_017743215.1_02022 CDS open 2407702-2409105 1404_na     467_aa hypothetical protein
2023 CP072503.1 GCA_017743215.1_02023 CDS open 2409398-2410636 1239_na     412_aa cycB Cyclodextrin-binding protein
2024 CP072503.1 GCA_017743215.1_02024 CDS open 2410875-2412485 1611_na     536_aa malL_2 Oligo-1%2C6-glucosidase 1
2025 CP072503.1 GCA_017743215.1_02025 CDS open 2412662-2412913 252_na     83_aa hypothetical protein
2026 CP072503.1 GCA_017743215.1_02026 CDS open 2412910-2413230 321_na     106_aa hypothetical protein
2027 CP072503.1 GCA_017743215.1_02027 CDS open 2413641-2414990 1350_na     449_aa hypothetical protein
2028 CP072503.1 GCA_017743215.1_02028 CDS open 2415197-2416291 1095_na     364_aa hypothetical protein
2029 CP072503.1 GCA_017743215.1_02029 CDS open 2416612-2417940 1329_na     442_aa hypothetical protein
2030 CP072503.1 GCA_017743215.1_02030 CDS open 2418028-2419047 1020_na     339_aa exuR putative HTH-type transcriptional repressor ExuR
2031 CP072503.1 GCA_017743215.1_02031 CDS open 2419366-2420220 855_na     284_aa melD_6 Melibioseraffinosestachyose import permease protein MelD
2032 CP072503.1 GCA_017743215.1_02032 CDS open 2420217-2421053 837_na     278_aa ngcG_2 Diacetylchitobiose uptake system permease protein NgcG
2033 CP072503.1 GCA_017743215.1_02033 CDS open 2421211-2422221 1011_na     336_aa ccpA_9 Catabolite control protein A
2034 CP072503.1 GCA_017743215.1_02034 CDS open 2422715-2424028 1314_na     437_aa hypothetical protein
2035 CP072503.1 GCA_017743215.1_02035 CDS open 2424231-2425622 1392_na     463_aa hypothetical protein
2036 CP072503.1 GCA_017743215.1_02036 CDS open 2425765-2426898 1134_na     377_aa ccpA_10 Catabolite control protein A
2037 CP072503.1 GCA_017743215.1_02037 CDS open 2426886-2427524 639_na     212_aa hypothetical protein
2038 CP072503.1 GCA_017743215.1_02038 CDS open 2427721-2429472 1752_na     583_aa malL_3 Oligo-1%2C6-glucosidase
2039 CP072503.1 GCA_017743215.1_02039 CDS open 2430235-2432406 2172_na     723_aa malQ_2 4-alpha-glucanotransferase
2040 CP072503.1 GCA_017743215.1_02040 CDS open 2432900-2433955 1056_na     351_aa ccpA_11 Catabolite control protein A
2041 CP072503.1 GCA_017743215.1_02041 CDS open 2434327-2435688 1362_na     453_aa hypothetical protein
2042 CP072503.1 GCA_017743215.1_02042 CDS open 2435757-2436767 1011_na     336_aa ccpA_12 Catabolite control protein A
2043 CP072503.1 GCA_017743215.1_02043 CDS open 2436924-2437574 651_na     216_aa hypothetical protein
2044 CP072503.1 GCA_017743215.1_02044 CDS open 2437992-2439791 1800_na     599_aa malL_4 Oligo-1%2C6-glucosidase
2045 CP072503.1 GCA_017743215.1_02045 CDS open 2439959-2441323 1365_na     454_aa hypothetical protein
2046 CP072503.1 GCA_017743215.1_02046 CDS open 2441434-2442465 1032_na     343_aa ccpA_13 Catabolite control protein A
2047 CP072503.1 GCA_017743215.1_02047 CDS open 2442621-2443325 705_na     234_aa gpmA_4 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
2048 CP072503.1 GCA_017743215.1_02048 CDS open 2443505-2443834 330_na     109_aa hypothetical protein
2049 CP072503.1 GCA_017743215.1_02049 CDS open 2443843-2444433 591_na     196_aa hypothetical protein
2050 CP072503.1 GCA_017743215.1_02050 CDS open 2444433-2446826 2394_na     797_aa Beta-galactosidase BoGH2A
2051 CP072503.1 GCA_017743215.1_02051 CDS open 2446937-2447344 408_na     135_aa hypothetical protein
2052 CP072503.1 GCA_017743215.1_02052 CDS open 2447354-2450404 3051_na     1016_aa hypothetical protein
2053 CP072503.1 GCA_017743215.1_02053 CDS open 2450598-2451305 708_na     235_aa hypothetical protein
2054 CP072503.1 GCA_017743215.1_02054 CDS open 2451302-2452603 1302_na     433_aa hypothetical protein
2055 CP072503.1 GCA_017743215.1_02055 CDS open 2452643-2453431 789_na     262_aa nfrA NADPH-dependent oxidoreductase
2056 CP072503.1 GCA_017743215.1_02056 CDS open 2453607-2453864 258_na     85_aa hypothetical protein
2057 CP072503.1 rRNA open 2454439-2457488 23S ribosomal RNA
2058 CP072503.1 rRNA open 2457949-2459475 16S ribosomal RNA
2059 CP072503.1 GCA_017743215.1_02059 CDS open 2459958-2460722 765_na     254_aa cobB NAD-dependent protein deacetylase
2060 CP072503.1 GCA_017743215.1_02060 CDS open 2461052-2462359 1308_na     435_aa tdcB L-threonine ammonia-lyase
2061 CP072503.1 GCA_017743215.1_02061 CDS open 2462486-2464306 1821_na     606_aa malL_5 Oligo-1%2C6-glucosidase
2062 CP072503.1 GCA_017743215.1_02062 CDS open 2464424-2466154 1731_na     576_aa malL_6 Oligo-1%2C6-glucosidase
2063 CP072503.1 GCA_017743215.1_02063 CDS open 2466161-2466946 786_na     261_aa ngcG_3 Diacetylchitobiose uptake system permease protein NgcG
2064 CP072503.1 GCA_017743215.1_02064 CDS open 2466992-2467891 900_na     299_aa ngcF Diacetylchitobiose uptake system permease protein NgcF
2065 CP072503.1 GCA_017743215.1_02065 CDS open 2468029-2469354 1326_na     441_aa hypothetical protein
2066 CP072503.1 GCA_017743215.1_02066 CDS open 2469682-2470701 1020_na     339_aa ccpA_14 Catabolite control protein A
2067 CP072503.1 GCA_017743215.1_02067 CDS open 2470929-2471804 876_na     291_aa ngcG_4 Diacetylchitobiose uptake system permease protein NgcG
2068 CP072503.1 GCA_017743215.1_02068 CDS open 2471825-2472739 915_na     304_aa melD_7 Melibioseraffinosestachyose import permease protein MelD
2069 CP072503.1 GCA_017743215.1_02069 CDS open 2472754-2474046 1293_na     430_aa hypothetical protein
2070 CP072503.1 GCA_017743215.1_02070 CDS open 2474229-2475431 1203_na     400_aa mlc_2 Protein mlc
2071 CP072503.1 GCA_017743215.1_02071 CDS open 2475880-2478174 2295_na     764_aa rafA_2 Alpha-galactosidase
2072 CP072503.1 GCA_017743215.1_02072 CDS open 2478332-2478769 438_na     145_aa tadA tRNA-specific adenosine deaminase
2073 CP072503.1 GCA_017743215.1_02073 CDS open 2478869-2480941 2073_na     690_aa nhaK Sodium%2C potassium%2C lithium and rubidiumH(+) antiporter
2074 CP072503.1 GCA_017743215.1_02074 CDS open 2481229-2481987 759_na     252_aa hypothetical protein
2075 CP072503.1 GCA_017743215.1_02075 CDS open 2482098-2482679 582_na     193_aa dcd dCTP deaminase%2C dUMP-forming
2076 CP072503.1 GCA_017743215.1_02076 CDS open 2482833-2485823 2991_na     996_aa pacL Calcium-transporting ATPase
2077 CP072503.1 GCA_017743215.1_02077 CDS open 2486237-2486359 123_na     40_aa hypothetical protein
2078 CP072503.1 GCA_017743215.1_02078 CDS open 2486605-2487594 990_na     329_aa putative tRNArRNA methyltransferase
2079 CP072503.1 GCA_017743215.1_02079 CDS open 2487681-2488349 669_na     222_aa IS3 family transposase ISBlo3
2080 CP072503.1 GCA_017743215.1_02080 CDS open 2488487-2489068 582_na     193_aa hypothetical protein
2081 CP072503.1 GCA_017743215.1_02081 CDS open 2489152-2490564 1413_na     470_aa hypothetical protein
2082 CP072503.1 GCA_017743215.1_02082 CDS open 2490789-2491916 1128_na     375_aa msiK Diacetylchitobiose uptake system ATP-binding protein MsiK
2083 CP072503.1 misc_RNA open 2491919-2491978 msiK
2084 CP072503.1 GCA_017743215.1_02084 CDS open 2492235-2492951 717_na     238_aa hypothetical protein
2085 CP072503.1 GCA_017743215.1_02085 CDS open 2492948-2494321 1374_na     457_aa hypothetical protein
2086 CP072503.1 GCA_017743215.1_02086 CDS open 2494495-2494902 408_na     135_aa hypothetical protein
2087 CP072503.1 GCA_017743215.1_02087 CDS open 2494829-2496217 1389_na     462_aa clcB Voltage-gated ClC-type chloride channel ClcB
2088 CP072503.1 GCA_017743215.1_02088 CDS open 2496306-2497937 1632_na     543_aa QRSL1 Glutamyl-tRNA(Gln) amidotransferase subunit A%2C chloroplasticmitochondrial
2089 CP072503.1 GCA_017743215.1_02089 CDS open 2497934-2498737 804_na     267_aa cmpC Bicarbonate transport ATP-binding protein CmpC
2090 CP072503.1 GCA_017743215.1_02090 CDS open 2498757-2499578 822_na     273_aa cmpB Bicarbonate transport system permease protein CmpB
2091 CP072503.1 GCA_017743215.1_02091 CDS open 2499612-2500592 981_na     326_aa hypothetical protein
2092 CP072503.1 GCA_017743215.1_02092 CDS open 2500655-2501818 1164_na     387_aa hypothetical protein
2093 CP072503.1 GCA_017743215.1_02093 CDS open 2502120-2502737 618_na     205_aa lutR HTH-type transcriptional regulator LutR
2094 CP072503.1 GCA_017743215.1_02094 CDS open 2502826-2503458 633_na     210_aa lacA_3 Galactoside O-acetyltransferase
2095 CP072503.1 GCA_017743215.1_02095 CDS open 2503614-2504216 603_na     200_aa aatA Aspartateprephenate aminotransferase
2096 CP072503.1 GCA_017743215.1_02096 CDS open 2504310-2504810 501_na     166_aa aspC_3 Aspartate aminotransferase
2097 CP072503.1 GCA_017743215.1_02097 CDS open 2505168-2506097 930_na     309_aa aes Acetyl esterase
2098 CP072503.1 GCA_017743215.1_02098 CDS open 2506118-2507359 1242_na     413_aa hypothetical protein
2099 CP072503.1 GCA_017743215.1_02099 CDS open 2507356-2508327 972_na     323_aa deoR Deoxyribonucleoside regulator
2100 CP072503.1 GCA_017743215.1_02100 CDS open 2508566-2510491 1926_na     641_aa hypothetical protein
2101 CP072503.1 GCA_017743215.1_02101 CDS open 2510669-2511241 573_na     190_aa hypothetical protein
2102 CP072503.1 GCA_017743215.1_02102 CDS open 2511234-2513663 2430_na     809_aa bglB_4 Thermostable beta-glucosidase B
2103 CP072503.1 GCA_017743215.1_02103 CDS open 2513987-2516878 2892_na     963_aa hypothetical protein
2104 CP072503.1 GCA_017743215.1_02104 CDS open 2517155-2517790 636_na     211_aa hypothetical protein
2105 CP072503.1 rRNA open 2518329-2521378 23S ribosomal RNA
2106 CP072503.1 rRNA open 2521839-2523365 16S ribosomal RNA
2107 CP072503.1 GCA_017743215.1_02107 CDS open 2523421-2524008 588_na     195_aa hypothetical protein
2108 CP072503.1 GCA_017743215.1_02108 CDS open 2524045-2526951 2907_na     968_aa hypothetical protein
2109 CP072503.1 GCA_017743215.1_02109 CDS open 2527238-2529235 1998_na     665_aa pknD_3 Serinethreonine-protein kinase PknD
2110 CP072503.1 GCA_017743215.1_02110 CDS open 2529373-2530353 981_na     326_aa hypothetical protein
2111 CP072503.1 tRNA open 2530470-2530544 tRNA-Thr(tgt)
2112 CP072503.1 GCA_017743215.1_02112 CDS open 2530850-2532256 1407_na     468_aa hypothetical protein
2113 CP072503.1 GCA_017743215.1_02113 CDS open 2532256-2533206 951_na     316_aa ksgA Ribosomal RNA small subunit methyltransferase A
2114 CP072503.1 GCA_017743215.1_02114 CDS open 2533203-2534102 900_na     299_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2115 CP072503.1 GCA_017743215.1_02115 CDS open 2534147-2534785 639_na     212_aa hypothetical protein
2116 CP072503.1 GCA_017743215.1_02116 CDS open 2534848-2536437 1590_na     529_aa cca CCA-adding enzyme
2117 CP072503.1 GCA_017743215.1_02117 CDS open 2536515-2537210 696_na     231_aa rppH RNA pyrophosphohydrolase
2118 CP072503.1 GCA_017743215.1_02118 CDS open 2537210-2539315 2106_na     701_aa hypothetical protein
2119 CP072503.1 GCA_017743215.1_02119 CDS open 2539312-2543028 3717_na     1238_aa murJ lipid II flippase MurJ
2120 CP072503.1 GCA_017743215.1_02120 CDS open 2543174-2544907 1734_na     577_aa alsS Acetolactate synthase
2121 CP072503.1 GCA_017743215.1_02121 CDS open 2545055-2546020 966_na     321_aa trxB Thioredoxin reductase
2122 CP072503.1 GCA_017743215.1_02122 CDS open 2546214-2547521 1308_na     435_aa noc_2 Nucleoid occlusion protein
2123 CP072503.1 GCA_017743215.1_02123 CDS open 2547524-2548504 981_na     326_aa Iron-sulfur cluster carrier protein
2124 CP072503.1 GCA_017743215.1_02124 CDS open 2548737-2549486 750_na     249_aa rsmG Ribosomal RNA small subunit methyltransferase G
2125 CP072503.1 GCA_017743215.1_02125 CDS open 2549684-2550229 546_na     181_aa hypothetical protein
2126 CP072503.1 GCA_017743215.1_02126 CDS open 2550349-2551359 1011_na     336_aa yidC Membrane protein insertase YidC
2127 CP072503.1 GCA_017743215.1_02127 CDS open 2552062-2552196 135_na     44_aa rpmH 50S ribosomal protein L34