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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Treponema medium (GCA_018336815.1)

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PROKKA Annotations for GCA_018336815.1
Genome Selected: Treponema medium
ContigsBases CDSrRNA tmRNAtRNA
1 2711688 2555 6 1 50
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Annotation Table [page:6]    |    Number of Records Found: 2617 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CP050497.1 GCA_018336815.1_02501 CDS open 2580273-2581571 1299_na     432_aa hypothetical protein
2502 CP050497.1 GCA_018336815.1_02502 CDS open 2581784-2582269 486_na     161_aa zur Zinc uptake regulation protein
2503 CP050497.1 GCA_018336815.1_02503 CDS open 2582385-2584391 2007_na     668_aa mcpH Methyl-accepting chemotaxis protein McpH
2504 CP050497.1 GCA_018336815.1_02504 CDS open 2584843-2585958 1116_na     371_aa hypothetical protein
2505 CP050497.1 GCA_018336815.1_02505 CDS open 2585981-2586988 1008_na     335_aa noc Nucleoid occlusion protein
2506 CP050497.1 GCA_018336815.1_02506 CDS open 2586981-2587778 798_na     265_aa soj Sporulation initiation inhibitor protein Soj
2507 CP050497.1 GCA_018336815.1_02507 CDS open 2587800-2590235 2436_na     811_aa lon1 Lon protease 1
2508 CP050497.1 GCA_018336815.1_02508 CDS open 2590211-2590591 381_na     126_aa hypothetical protein
2509 CP050497.1 GCA_018336815.1_02509 CDS open 2591025-2592524 1500_na     499_aa hypothetical protein
2510 CP050497.1 GCA_018336815.1_02510 CDS open 2593278-2594303 1026_na     341_aa hypothetical protein
2511 CP050497.1 GCA_018336815.1_02511 CDS open 2594461-2594952 492_na     163_aa hypothetical protein
2512 CP050497.1 GCA_018336815.1_02512 CDS open 2595221-2595445 225_na     74_aa hypothetical protein
2513 CP050497.1 GCA_018336815.1_02513 CDS open 2595919-2596203 285_na     94_aa hypothetical protein
2514 CP050497.1 GCA_018336815.1_02514 CDS open 2596206-2596619 414_na     137_aa hypothetical protein
2515 CP050497.1 GCA_018336815.1_02515 CDS open 2596763-2598598 1836_na     611_aa prmC_3 Release factor glutamine methyltransferase
2516 CP050497.1 GCA_018336815.1_02516 CDS open 2598585-2598875 291_na     96_aa hypothetical protein
2517 CP050497.1 GCA_018336815.1_02517 CDS open 2598975-2599202 228_na     75_aa hypothetical protein
2518 CP050497.1 GCA_018336815.1_02518 CDS open 2599105-2599995 891_na     296_aa hypothetical protein
2519 CP050497.1 GCA_018336815.1_02519 CDS open 2600093-2601340 1248_na     415_aa Ferredoxin--NADP reductase
2520 CP050497.1 GCA_018336815.1_02520 CDS open 2601507-2603060 1554_na     517_aa lhgD_2 L-2-hydroxyglutarate dehydrogenase
2521 CP050497.1 GCA_018336815.1_02521 CDS open 2603064-2604557 1494_na     497_aa glpK Glycerol kinase
2522 CP050497.1 GCA_018336815.1_02522 CDS open 2605088-2605561 474_na     157_aa hypothetical protein
2523 CP050497.1 GCA_018336815.1_02523 CDS open 2606069-2606596 528_na     175_aa hypothetical protein
2524 CP050497.1 GCA_018336815.1_02524 CDS open 2606685-2607131 447_na     148_aa hypothetical protein
2525 CP050497.1 GCA_018336815.1_02525 CDS open 2607239-2609044 1806_na     601_aa putative ABC transporter ATP-binding protein
2526 CP050497.1 GCA_018336815.1_02526 CDS open 2609041-2610807 1767_na     588_aa Putative multidrug export ATP-bindingpermease protein
2527 CP050497.1 GCA_018336815.1_02527 CDS open 2610804-2611397 594_na     197_aa hypothetical protein
2528 CP050497.1 GCA_018336815.1_02528 CDS open 2611723-2612199 477_na     158_aa hypothetical protein
2529 CP050497.1 GCA_018336815.1_02529 CDS open 2612225-2613895 1671_na     556_aa hypothetical protein
2530 CP050497.1 GCA_018336815.1_02530 CDS open 2613898-2615010 1113_na     370_aa ugpC sn-glycerol-3-phosphate import ATP-binding protein UgpC
2531 CP050497.1 GCA_018336815.1_02531 CDS open 2615109-2616173 1065_na     354_aa putative protein
2532 CP050497.1 GCA_018336815.1_02532 CDS open 2616211-2616930 720_na     239_aa nanE Putative N-acetylmannosamine-6-phosphate 2-epimerase
2533 CP050497.1 GCA_018336815.1_02533 CDS open 2617105-2618865 1761_na     586_aa malQ 4-alpha-glucanotransferase
2534 CP050497.1 GCA_018336815.1_02534 CDS open 2618894-2620765 1872_na     623_aa hypothetical protein
2535 CP050497.1 GCA_018336815.1_02535 CDS open 2620936-2621136 201_na     66_aa hypothetical protein
2536 CP050497.1 GCA_018336815.1_02536 CDS open 2621553-2623469 1917_na     638_aa putative ABC transporter ATP-binding protein
2537 CP050497.1 GCA_018336815.1_02537 CDS open 2623462-2624028 567_na     188_aa Putative multidrug export ATP-bindingpermease protein
2538 CP050497.1 GCA_018336815.1_02538 CDS open 2623982-2625280 1299_na     432_aa putative ABC transporter ATP-binding protein
2539 CP050497.1 GCA_018336815.1_02539 CDS open 2625351-2626142 792_na     263_aa cbiO Cobalt import ATP-binding protein CbiO
2540 CP050497.1 GCA_018336815.1_02540 CDS open 2626180-2626866 687_na     228_aa ecfA2 Energy-coupling factor transporter ATP-binding protein EcfA2
2541 CP050497.1 GCA_018336815.1_02541 CDS open 2626854-2628578 1725_na     574_aa putative ABC transporter ATP-binding protein
2542 CP050497.1 GCA_018336815.1_02542 CDS open 2628665-2630461 1797_na     598_aa putative ABC transporter ATP-binding protein
2543 CP050497.1 GCA_018336815.1_02543 CDS open 2630463-2632235 1773_na     590_aa Putative multidrug export ATP-bindingpermease protein
2544 CP050497.1 GCA_018336815.1_02544 CDS open 2632246-2633964 1719_na     572_aa Putative multidrug export ATP-bindingpermease protein
2545 CP050497.1 GCA_018336815.1_02545 CDS open 2634101-2634550 450_na     149_aa hypothetical protein
2546 CP050497.1 GCA_018336815.1_02546 CDS open 2634504-2634671 168_na     55_aa hypothetical protein
2547 CP050497.1 GCA_018336815.1_02547 CDS open 2634869-2635117 249_na     82_aa hypothetical protein
2548 CP050497.1 GCA_018336815.1_02548 CDS open 2635593-2636543 951_na     316_aa hypothetical protein
2549 CP050497.1 GCA_018336815.1_02549 CDS open 2636799-2637749 951_na     316_aa rsgA Small ribosomal subunit biogenesis GTPase RsgA
2550 CP050497.1 GCA_018336815.1_02550 CDS open 2637749-2638537 789_na     262_aa murI Glutamate racemase
2551 CP050497.1 GCA_018336815.1_02551 CDS open 2638814-2639065 252_na     83_aa msbA_3 Lipid A export ATP-bindingpermease protein MsbA
2552 CP050497.1 GCA_018336815.1_02552 CDS open 2639059-2640165 1107_na     368_aa epmA Elongation factor P--(R)-beta-lysine ligase
2553 CP050497.1 GCA_018336815.1_02553 CDS open 2640238-2642007 1770_na     589_aa aspS Aspartate--tRNA ligase
2554 CP050497.1 GCA_018336815.1_02554 CDS open 2642113-2643021 909_na     302_aa lipR Putative acetyl-hydrolase LipR
2555 CP050497.1 GCA_018336815.1_02555 CDS open 2643024-2644250 1227_na     408_aa rlhA 23S rRNA 5-hydroxycytidine synthase
2556 CP050497.1 GCA_018336815.1_02556 CDS open 2644357-2645553 1197_na     398_aa hypothetical protein
2557 CP050497.1 GCA_018336815.1_02557 CDS open 2645513-2645635 123_na     40_aa hypothetical protein
2558 CP050497.1 GCA_018336815.1_02558 CDS open 2645896-2647356 1461_na     486_aa hypothetical protein
2559 CP050497.1 GCA_018336815.1_02559 CDS open 2647379-2648971 1593_na     530_aa murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase
2560 CP050497.1 GCA_018336815.1_02560 CDS open 2649222-2649641 420_na     139_aa hypothetical protein
2561 CP050497.1 GCA_018336815.1_02561 CDS open 2649830-2651074 1245_na     414_aa clpX ATP-dependent Clp protease ATP-binding subunit ClpX
2562 CP050497.1 GCA_018336815.1_02562 CDS open 2651067-2651672 606_na     201_aa clpP_2 ATP-dependent Clp protease proteolytic subunit
2563 CP050497.1 GCA_018336815.1_02563 CDS open 2651653-2653050 1398_na     465_aa tig Trigger factor
2564 CP050497.1 tRNA open 2653155-2653227 tRNA-Gly(gcc)
2565 CP050497.1 tRNA open 2653263-2653342 tRNA-Leu(tag)
2566 CP050497.1 tRNA open 2653425-2653499 tRNA-Lys(ctt)
2567 CP050497.1 GCA_018336815.1_02567 CDS open 2653929-2655074 1146_na     381_aa csd putative cysteine desulfurase
2568 CP050497.1 GCA_018336815.1_02568 CDS open 2655092-2655361 270_na     89_aa hypothetical protein
2569 CP050497.1 GCA_018336815.1_02569 CDS open 2655365-2655967 603_na     200_aa hypothetical protein
2570 CP050497.1 GCA_018336815.1_02570 CDS open 2656047-2656253 207_na     68_aa hypothetical protein
2571 CP050497.1 GCA_018336815.1_02571 CDS open 2656332-2657390 1059_na     352_aa selD_2 Selenide%2C water dikinase
2572 CP050497.1 GCA_018336815.1_02572 CDS open 2657562-2658125 564_na     187_aa hypothetical protein
2573 CP050497.1 GCA_018336815.1_02573 CDS open 2658147-2658941 795_na     264_aa flgG_1 Flagellar basal-body rod protein FlgG
2574 CP050497.1 GCA_018336815.1_02574 CDS open 2658965-2659780 816_na     271_aa flgG_2 Flagellar basal-body rod protein FlgG
2575 CP050497.1 GCA_018336815.1_02575 CDS open 2659875-2661569 1695_na     564_aa hypothetical protein
2576 CP050497.1 GCA_018336815.1_02576 CDS open 2662065-2662346 282_na     93_aa hypothetical protein
2577 CP050497.1 GCA_018336815.1_02577 CDS open 2662594-2663268 675_na     224_aa hypothetical protein
2578 CP050497.1 GCA_018336815.1_02578 CDS open 2663261-2664682 1422_na     473_aa pcp Pyrrolidone-carboxylate peptidase
2579 CP050497.1 GCA_018336815.1_02579 CDS open 2664696-2665331 636_na     211_aa hypothetical protein
2580 CP050497.1 GCA_018336815.1_02580 CDS open 2665312-2668068 2757_na     918_aa hypothetical protein
2581 CP050497.1 GCA_018336815.1_02581 CDS open 2668085-2669107 1023_na     340_aa yrbG Inner membrane protein YrbG
2582 CP050497.1 GCA_018336815.1_02582 CDS open 2669218-2670594 1377_na     458_aa aldH1 4%2C4-diaponeurosporen-aldehyde dehydrogenase
2583 CP050497.1 GCA_018336815.1_02583 CDS open 2670814-2671986 1173_na     390_aa bcd_2 Acyl-CoA dehydrogenase%2C short-chain specific
2584 CP050497.1 GCA_018336815.1_02584 CDS open 2672002-2672802 801_na     266_aa acrB Acryloyl-CoA reductase electron transfer subunit gamma
2585 CP050497.1 GCA_018336815.1_02585 CDS open 2672823-2673926 1104_na     367_aa acrA Acryloyl-CoA reductase electron transfer subunit beta
2586 CP050497.1 GCA_018336815.1_02586 CDS open 2674374-2674628 255_na     84_aa hypothetical protein
2587 CP050497.1 GCA_018336815.1_02587 CDS open 2674612-2674863 252_na     83_aa hypothetical protein
2588 CP050497.1 GCA_018336815.1_02588 CDS open 2675422-2675637 216_na     71_aa hypothetical protein
2589 CP050497.1 GCA_018336815.1_02589 CDS open 2675640-2676530 891_na     296_aa hypothetical protein
2590 CP050497.1 GCA_018336815.1_02590 CDS open 2676702-2676992 291_na     96_aa hypothetical protein
2591 CP050497.1 GCA_018336815.1_02591 CDS open 2677089-2677607 519_na     172_aa hypothetical protein
2592 CP050497.1 GCA_018336815.1_02592 CDS open 2678128-2678355 228_na     75_aa hypothetical protein
2593 CP050497.1 GCA_018336815.1_02593 CDS open 2678627-2680708 2082_na     693_aa hypothetical protein
2594 CP050497.1 GCA_018336815.1_02594 CDS open 2681086-2681259 174_na     57_aa hypothetical protein
2595 CP050497.1 GCA_018336815.1_02595 CDS open 2681647-2683068 1422_na     473_aa pncB2 Nicotinate phosphoribosyltransferase pncB2
2596 CP050497.1 GCA_018336815.1_02596 CDS open 2683125-2683646 522_na     173_aa hypothetical protein
2597 CP050497.1 GCA_018336815.1_02597 CDS open 2683652-2683987 336_na     111_aa hypothetical protein
2598 CP050497.1 GCA_018336815.1_02598 CDS open 2683968-2685941 1974_na     657_aa hypothetical protein
2599 CP050497.1 GCA_018336815.1_02599 CDS open 2685952-2686740 789_na     262_aa fliA_2 RNA polymerase sigma factor FliA
2600 CP050497.1 GCA_018336815.1_02600 CDS open 2686761-2687423 663_na     220_aa hypothetical protein
2601 CP050497.1 GCA_018336815.1_02601 CDS open 2687677-2689848 2172_na     723_aa pctB_3 Methyl-accepting chemotaxis protein PctB
2602 CP050497.1 GCA_018336815.1_02602 CDS open 2690312-2691859 1548_na     515_aa hypothetical protein
2603 CP050497.1 GCA_018336815.1_02603 CDS open 2691937-2693955 2019_na     672_aa mutL DNA mismatch repair protein MutL
2604 CP050497.1 GCA_018336815.1_02604 CDS open 2694052-2694222 171_na     56_aa xseB Exodeoxyribonuclease 7 small subunit
2605 CP050497.1 GCA_018336815.1_02605 CDS open 2694561-2696036 1476_na     491_aa aroE Shikimate dehydrogenase (NADP(+))
2606 CP050497.1 GCA_018336815.1_02606 CDS open 2696029-2696760 732_na     243_aa rpiA Ribose-5-phosphate isomerase A
2607 CP050497.1 GCA_018336815.1_02607 CDS open 2697052-2697288 237_na     78_aa hypothetical protein
2608 CP050497.1 GCA_018336815.1_02608 CDS open 2697426-2700857 3432_na     1143_aa dnaE DNA polymerase III subunit alpha
2609 CP050497.1 GCA_018336815.1_02609 CDS open 2700948-2701937 990_na     329_aa hypothetical protein
2610 CP050497.1 GCA_018336815.1_02610 CDS open 2701946-2702287 342_na     113_aa hypothetical protein
2611 CP050497.1 GCA_018336815.1_02611 CDS open 2702277-2704433 2157_na     718_aa hypothetical protein
2612 CP050497.1 GCA_018336815.1_02612 CDS open 2704809-2705552 744_na     247_aa putative transcriptional regulatory protein
2613 CP050497.1 GCA_018336815.1_02613 CDS open 2706259-2707320 1062_na     353_aa potD Spermidineputrescine-binding periplasmic protein
2614 CP050497.1 GCA_018336815.1_02614 CDS open 2707449-2707823 375_na     124_aa hypothetical protein
2615 CP050497.1 GCA_018336815.1_02615 CDS open 2707792-2708037 246_na     81_aa hypothetical protein
2616 CP050497.1 GCA_018336815.1_02616 CDS open 2708167-2710743 2577_na     858_aa clpB Chaperone protein ClpB
2617 CP050497.1 GCA_018336815.1_02617 CDS open 2710857-2711258 402_na     133_aa hypothetical protein