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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Veillonella atypica (GCA_020560985.1)

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PROKKA Annotations for GCA_020560985.1
Genome Selected: Veillonella atypica
ContigsBases CDSrRNA tmRNAtRNA
239 2,212,497 2043 3 1 39
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2105 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 JAJCNH010000008.1 GCA_020560985.1_02001 CDS open 112535-114577 2043_na     680_aa recG ATP-dependent DNA helicase RecG
2002 JAJCNH010000008.1 GCA_020560985.1_02002 CDS open 114704-114889 186_na     61_aa hypothetical protein
2003 JAJCNH010000009.1 GCA_020560985.1_02003 CDS open 175-1173 999_na     332_aa ghrB Glyoxylatehydroxypyruvate reductase B
2004 JAJCNH010000009.1 GCA_020560985.1_02004 CDS open 1219-2907 1689_na     562_aa glnS Glutamine--tRNA ligase
2005 JAJCNH010000009.1 GCA_020560985.1_02005 CDS open 2957-3583 627_na     208_aa hypothetical protein
2006 JAJCNH010000009.1 GCA_020560985.1_02006 CDS open 3693-4280 588_na     195_aa hypothetical protein
2007 JAJCNH010000009.1 GCA_020560985.1_02007 CDS open 4291-4710 420_na     139_aa Flavodoxin
2008 JAJCNH010000009.1 GCA_020560985.1_02008 CDS open 4839-6029 1191_na     396_aa rlp 5-methylthioribulose-1-phosphate isomerase
2009 JAJCNH010000009.1 GCA_020560985.1_02009 CDS open 6121-6930 810_na     269_aa yycJ Putative metallo-hydrolase YycJ
2010 JAJCNH010000009.1 GCA_020560985.1_02010 CDS open 6944-7423 480_na     159_aa rlmH Ribosomal RNA large subunit methyltransferase H
2011 JAJCNH010000009.1 GCA_020560985.1_02011 CDS open 7531-7986 456_na     151_aa IMPDH Inosine-5-monophosphate dehydrogenase
2012 JAJCNH010000009.1 GCA_020560985.1_02012 CDS open 8145-9449 1305_na     434_aa tig Trigger factor
2013 JAJCNH010000009.1 GCA_020560985.1_02013 CDS open 9484-10077 594_na     197_aa clpP_2 ATP-dependent Clp protease proteolytic subunit
2014 JAJCNH010000009.1 GCA_020560985.1_02014 CDS open 10090-11343 1254_na     417_aa clpX ATP-dependent Clp protease ATP-binding subunit ClpX
2015 JAJCNH010000009.1 GCA_020560985.1_02015 CDS open 11409-13718 2310_na     769_aa lon1 Lon protease 1
2016 JAJCNH010000009.1 GCA_020560985.1_02016 CDS open 13718-14416 699_na     232_aa engB putative GTP-binding protein EngB
2017 JAJCNH010000009.1 GCA_020560985.1_02017 CDS open 14413-15384 972_na     323_aa ispB Octaprenyl diphosphate synthase
2018 JAJCNH010000009.1 GCA_020560985.1_02018 CDS open 15386-16270 885_na     294_aa tatC Sec-independent protein translocase protein TatC
2019 JAJCNH010000009.1 GCA_020560985.1_02019 CDS open 16293-18950 2658_na     885_aa valS Valine--tRNA ligase
2020 JAJCNH010000009.1 GCA_020560985.1_02020 CDS open 18960-20267 1308_na     435_aa fpgS Folylpolyglutamate synthase
2021 JAJCNH010000009.1 GCA_020560985.1_02021 CDS open 20277-21545 1269_na     422_aa hypothetical protein
2022 JAJCNH010000009.1 GCA_020560985.1_02022 CDS open 21916-23418 1503_na     500_aa cat1 Succinyl-CoA:coenzyme A transferase
2023 JAJCNH010000009.1 GCA_020560985.1_02023 CDS open 23447-25093 1647_na     548_aa mcm_2 Methylmalonyl-CoA mutase
2024 JAJCNH010000009.1 GCA_020560985.1_02024 CDS open 25121-25516 396_na     131_aa mcm_3 Methylmalonyl-CoA mutase
2025 JAJCNH010000009.1 GCA_020560985.1_02025 CDS open 25596-26534 939_na     312_aa putative GTPase
2026 JAJCNH010000009.1 GCA_020560985.1_02026 CDS open 26586-27008 423_na     140_aa epi Ethylmalonyl-CoAmethylmalonyl-CoA epimerase
2027 JAJCNH010000009.1 GCA_020560985.1_02027 CDS open 27045-28574 1530_na     509_aa Methylmalonyl-CoA carboxyltransferase 12S subunit
2028 JAJCNH010000009.1 GCA_020560985.1_02028 CDS open 28648-28992 345_na     114_aa hypothetical protein
2029 JAJCNH010000009.1 GCA_020560985.1_02029 CDS open 29016-29183 168_na     55_aa hypothetical protein
2030 JAJCNH010000009.1 GCA_020560985.1_02030 CDS open 29281-29658 378_na     125_aa gcdC Glutaconyl-CoA decarboxylase subunit gamma
2031 JAJCNH010000009.1 GCA_020560985.1_02031 CDS open 29732-30853 1122_na     373_aa gcdB Glutaconyl-CoA decarboxylase subunit beta
2032 JAJCNH010000009.1 GCA_020560985.1_02032 CDS open 31051-31308 258_na     85_aa hypothetical protein
2033 JAJCNH010000009.1 GCA_020560985.1_02033 CDS open 31348-32646 1299_na     432_aa sdcS_2 Sodium-dependent dicarboxylate transporter SdcS
2034 JAJCNH010000009.1 GCA_020560985.1_02034 CDS open 32887-33150 264_na     87_aa hypothetical protein
2035 JAJCNH010000009.1 GCA_020560985.1_02035 CDS open 33643-33807 165_na     54_aa Ferredoxin
2036 JAJCNH010000009.1 GCA_020560985.1_02036 CDS open 33916-34356 441_na     146_aa lspA Lipoprotein signal peptidase
2037 JAJCNH010000009.1 GCA_020560985.1_02037 CDS open 34357-35274 918_na     305_aa rluD_4 Ribosomal large subunit pseudouridine synthase D
2038 JAJCNH010000009.1 GCA_020560985.1_02038 CDS open 35286-35807 522_na     173_aa pyrR Bifunctional protein PyrR
2039 JAJCNH010000009.1 GCA_020560985.1_02039 CDS open 35905-37110 1206_na     401_aa tmcAL tRNA(Met) cytidine acetate ligase
2040 JAJCNH010000009.1 GCA_020560985.1_02040 CDS open 37309-37872 564_na     187_aa hypothetical protein
2041 JAJCNH010000009.1 GCA_020560985.1_02041 CDS open 37876-39081 1206_na     401_aa ackA Acetate kinase
2042 JAJCNH010000009.1 GCA_020560985.1_02042 CDS open 39220-39837 618_na     205_aa hypothetical protein
2043 JAJCNH010000009.1 GCA_020560985.1_02043 CDS open 39834-40403 570_na     189_aa maf dTTPUTP pyrophosphatase
2044 JAJCNH010000009.1 GCA_020560985.1_02044 CDS open 40506-41204 699_na     232_aa hypothetical protein
2045 JAJCNH010000009.1 GCA_020560985.1_02045 CDS open 41249-42286 1038_na     345_aa mreB_2 Cell shape-determining protein MreB
2046 JAJCNH010000009.1 GCA_020560985.1_02046 CDS open 42283-43200 918_na     305_aa mreC Cell shape-determining protein MreC
2047 JAJCNH010000009.1 GCA_020560985.1_02047 CDS open 43197-43688 492_na     163_aa hypothetical protein
2048 JAJCNH010000009.1 GCA_020560985.1_02048 CDS open 43727-45619 1893_na     630_aa mrdA Peptidoglycan D%2CD-transpeptidase MrdA
2049 JAJCNH010000009.1 GCA_020560985.1_02049 CDS open 45632-46546 915_na     304_aa Iron-sulfur cluster carrier protein
2050 JAJCNH010000009.1 GCA_020560985.1_02050 CDS open 46554-47657 1104_na     367_aa mrdB Peptidoglycan glycosyltransferase MrdB
2051 JAJCNH010000009.1 GCA_020560985.1_02051 CDS open 47717-49600 1884_na     627_aa hypothetical protein
2052 JAJCNH010000009.1 GCA_020560985.1_02052 CDS open 49572-50267 696_na     231_aa hypothetical protein
2053 JAJCNH010000009.1 GCA_020560985.1_02053 CDS open 50326-51753 1428_na     475_aa rng Ribonuclease G
2054 JAJCNH010000009.1 GCA_020560985.1_02054 CDS open 51763-52356 594_na     197_aa mntP putative manganese efflux pump MntP
2055 JAJCNH010000009.1 GCA_020560985.1_02055 CDS open 52561-52872 312_na     103_aa rplU 50S ribosomal protein L21
2056 JAJCNH010000009.1 GCA_020560985.1_02056 CDS open 52875-53189 315_na     104_aa hypothetical protein
2057 JAJCNH010000009.1 GCA_020560985.1_02057 CDS open 53202-53486 285_na     94_aa rpmA 50S ribosomal protein L27
2058 JAJCNH010000009.1 GCA_020560985.1_02058 CDS open 53700-54356 657_na     218_aa fetA putative iron export ATP-binding protein FetA
2059 JAJCNH010000009.1 GCA_020560985.1_02059 CDS open 54353-55117 765_na     254_aa fetB putative iron export permease protein FetB
2060 JAJCNH010000009.1 GCA_020560985.1_02060 CDS open 55407-56825 1419_na     472_aa cofH 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase
2061 JAJCNH010000009.1 GCA_020560985.1_02061 CDS open 57104-59098 1995_na     664_aa recJ Single-stranded-DNA-specific exonuclease RecJ
2062 JAJCNH010000009.1 GCA_020560985.1_02062 CDS open 59095-61335 2241_na     746_aa relA GTP pyrophosphokinase
2063 JAJCNH010000009.1 GCA_020560985.1_02063 CDS open 61335-61970 636_na     211_aa putative protein
2064 JAJCNH010000009.1 GCA_020560985.1_02064 CDS open 62001-62489 489_na     162_aa fur_2 Ferric uptake regulation protein
2065 JAJCNH010000009.1 GCA_020560985.1_02065 CDS open 62584-63909 1326_na     441_aa hemZ Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ
2066 JAJCNH010000009.1 GCA_020560985.1_02066 CDS open 63909-65180 1272_na     423_aa hisS Histidine--tRNA ligase
2067 JAJCNH010000009.1 GCA_020560985.1_02067 CDS open 65188-66990 1803_na     600_aa aspS Aspartate--tRNA ligase
2068 JAJCNH010000009.1 misc_RNA open 67091-67263 6S
2069 JAJCNH010000009.1 GCA_020560985.1_02069 CDS open 67292-68596 1305_na     434_aa putative AAA domain-containing protein
2070 JAJCNH010000009.1 GCA_020560985.1_02070 CDS open 68674-71364 2691_na     896_aa hypothetical protein
2071 JAJCNH010000009.1 GCA_020560985.1_02071 CDS open 71378-71830 453_na     150_aa hypothetical protein
2072 JAJCNH010000009.1 GCA_020560985.1_02072 CDS open 71865-73793 1929_na     642_aa hypothetical protein
2073 JAJCNH010000009.1 GCA_020560985.1_02073 CDS open 73790-74830 1041_na     346_aa hypothetical protein
2074 JAJCNH010000009.1 GCA_020560985.1_02074 CDS open 74895-76241 1347_na     448_aa rimO Ribosomal protein S12 methylthiotransferase RimO
2075 JAJCNH010000009.1 GCA_020560985.1_02075 CDS open 76305-77555 1251_na     416_aa cinA_2 Putative competence-damage inducible protein
2076 JAJCNH010000009.1 GCA_020560985.1_02076 CDS open 77555-78598 1044_na     347_aa recA Protein RecA
2077 JAJCNH010000009.1 GCA_020560985.1_02077 CDS open 78654-79106 453_na     150_aa recX Regulatory protein RecX
2078 JAJCNH010000009.1 GCA_020560985.1_02078 CDS open 79273-80778 1506_na     501_aa rny Ribonuclease Y
2079 JAJCNH010000009.1 GCA_020560985.1_02079 CDS open 80949-82706 1758_na     585_aa dnaG DNA primase
2080 JAJCNH010000009.1 GCA_020560985.1_02080 CDS open 82728-83894 1167_na     388_aa sigA RNA polymerase sigma factor SigA
2081 JAJCNH010000009.1 GCA_020560985.1_02081 CDS open 84003-84341 339_na     112_aa queD 6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase
2082 JAJCNH010000009.1 GCA_020560985.1_02082 CDS open 84316-84978 663_na     220_aa queE 7-carboxy-7-deazaguanine synthase
2083 JAJCNH010000009.1 GCA_020560985.1_02083 CDS open 84980-85543 564_na     187_aa folE_2 GTP cyclohydrolase 1
2084 JAJCNH010000009.1 tRNA open 85874-85948 tRNA-Met(cat)
2085 JAJCNH010000009.1 GCA_020560985.1_02085 CDS open 86068-86805 738_na     245_aa trmK tRNA (adenine(22)-N(1))-methyltransferase
2086 JAJCNH010000009.1 GCA_020560985.1_02086 CDS open 86827-87933 1107_na     368_aa GTP cyclohydrolase 1 type 2
2087 JAJCNH010000009.1 misc_RNA open 87999-88355 RNaseP_bact_a
2088 JAJCNH010000009.1 GCA_020560985.1_02088 CDS open 88394-88732 339_na     112_aa trxA_2 Thioredoxin
2089 JAJCNH010000009.1 GCA_020560985.1_02089 CDS open 88944-90083 1140_na     379_aa hoxK Uptake hydrogenase small subunit
2090 JAJCNH010000009.1 GCA_020560985.1_02090 CDS open 90083-91984 1902_na     633_aa hyaB Hydrogenase-1 large chain
2091 JAJCNH010000009.1 GCA_020560985.1_02091 CDS open 91999-92805 807_na     268_aa hupC putative NiFe-hydrogenase B-type cytochrome subunit
2092 JAJCNH010000009.1 GCA_020560985.1_02092 CDS open 92798-93373 576_na     191_aa hybD Hydrogenase 2 maturation protease
2093 JAJCNH010000009.1 GCA_020560985.1_02093 CDS open 93432-93809 378_na     125_aa hypothetical protein
2094 JAJCNH010000009.1 GCA_020560985.1_02094 CDS open 94057-95067 1011_na     336_aa putative glycosyltransferase
2095 JAJCNH010000009.1 GCA_020560985.1_02095 CDS open 95151-95945 795_na     264_aa hypothetical protein
2096 JAJCNH010000009.1 GCA_020560985.1_02096 CDS open 96189-98807 2619_na     872_aa alaS Alanine--tRNA ligase
2097 JAJCNH010000009.1 GCA_020560985.1_02097 CDS open 98907-99167 261_na     86_aa hypothetical protein
2098 JAJCNH010000009.1 GCA_020560985.1_02098 CDS open 99167-99589 423_na     140_aa yrrK Putative pre-16S rRNA nuclease
2099 JAJCNH010000009.1 GCA_020560985.1_02099 CDS open 99656-99946 291_na     96_aa hypothetical protein
2100 JAJCNH010000009.1 GCA_020560985.1_02100 CDS open 100141-101553 1413_na     470_aa mltG Endolytic murein transglycosylase
2101 JAJCNH010000009.1 GCA_020560985.1_02101 CDS open 101612-102217 606_na     201_aa trmR tRNA 5-hydroxyuridine methyltransferase
2102 JAJCNH010000009.1 GCA_020560985.1_02102 CDS open 102217-103458 1242_na     413_aa rlhA 23S rRNA 5-hydroxycytidine synthase
2103 JAJCNH010000009.1 GCA_020560985.1_02103 CDS open 103460-103819 360_na     119_aa hypothetical protein
2104 JAJCNH010000009.1 GCA_020560985.1_02104 CDS open 103865-104857 993_na     330_aa hypothetical protein
2105 JAJCNH010000092.1 GCA_020560985.1_02105 CDS open 13-249 237_na     78_aa hypothetical protein