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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_022568975.1)

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PROKKA Annotations for GCA_022568975.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
25 2586588 2426 4 1 56
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:6]    |    Number of Records Found: 2574 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JAKRKH010000010.1 GCA_022568975.1_02501 CDS open 38742-39284 543_na     180_aa hypothetical protein
2502 JAKRKH010000010.1 GCA_022568975.1_02502 CDS open 39395-39922 528_na     175_aa yacP putative protein YacP
2503 JAKRKH010000010.1 GCA_022568975.1_02503 CDS open 39922-40668 747_na     248_aa Putative TrmH family tRNArRNA methyltransferase
2504 JAKRKH010000010.1 GCA_022568975.1_02504 CDS open 40671-41075 405_na     134_aa mrnC Mini-ribonuclease 3
2505 JAKRKH010000010.1 GCA_022568975.1_02505 CDS open 41068-42468 1401_na     466_aa cysS Cysteine--tRNA ligase
2506 JAKRKH010000010.1 GCA_022568975.1_02506 CDS open 42452-43093 642_na     213_aa cysE Serine acetyltransferase
2507 JAKRKH010000010.1 GCA_022568975.1_02507 CDS open 43456-44913 1458_na     485_aa gltX Glutamate--tRNA ligase
2508 JAKRKH010000010.1 GCA_022568975.1_02508 CDS open 45237-46304 1068_na     355_aa yacL putative PIN and TRAM-domain containing protein YacL
2509 JAKRKH010000010.1 GCA_022568975.1_02509 CDS open 46339-47706 1368_na     455_aa radA DNA repair protein RadA
2510 JAKRKH010000010.1 GCA_022568975.1_02510 CDS open 47937-50396 2460_na     819_aa clpC ATP-dependent Clp protease ATP-binding subunit ClpC
2511 JAKRKH010000010.1 GCA_022568975.1_02511 CDS open 50410-51426 1017_na     338_aa mcsB Protein-arginine kinase
2512 JAKRKH010000010.1 GCA_022568975.1_02512 CDS open 51416-51973 558_na     185_aa mcsA Protein-arginine kinase activator protein
2513 JAKRKH010000010.1 GCA_022568975.1_02513 CDS open 52000-52470 471_na     156_aa ctsR Transcriptional regulator CtsR
2514 JAKRKH010000010.1 GCA_022568975.1_02514 CDS open 52615-53829 1215_na     404_aa nupC_2 Nucleoside permease NupC
2515 JAKRKH010000010.1 GCA_022568975.1_02515 CDS open 54060-54614 555_na     184_aa pdxT Pyridoxal 5-phosphate synthase subunit PdxT
2516 JAKRKH010000010.1 GCA_022568975.1_02516 CDS open 54618-55505 888_na     295_aa pdxS Pyridoxal 5-phosphate synthase subunit PdxS
2517 JAKRKH010000010.1 GCA_022568975.1_02517 CDS open 55603-56985 1383_na     460_aa gabR HTH-type transcriptional regulatory protein GabR
2518 JAKRKH010000011.1 tRNA open 56-130 tRNA-Lys(ttt)
2519 JAKRKH010000011.1 tRNA open 136-211 tRNA-Thr(tgt)
2520 JAKRKH010000011.1 tRNA open 220-295 tRNA-Val(tac)
2521 JAKRKH010000011.1 rRNA open 311-419 5S ribosomal RNA
2522 JAKRKH010000011.1 GCA_022568975.1_02522 CDS open 831-2318 1488_na     495_aa lysS Lysine--tRNA ligase
2523 JAKRKH010000011.1 GCA_022568975.1_02523 CDS open 2843-3322 480_na     159_aa folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2524 JAKRKH010000011.1 GCA_022568975.1_02524 CDS open 3323-3688 366_na     121_aa folB Dihydroneopterin aldolase
2525 JAKRKH010000011.1 GCA_022568975.1_02525 CDS open 3666-4469 804_na     267_aa folP Dihydropteroate synthase
2526 JAKRKH010000011.1 GCA_022568975.1_02526 CDS open 4691-5623 933_na     310_aa cysK Cysteine synthase
2527 JAKRKH010000011.1 GCA_022568975.1_02527 CDS open 5800-6684 885_na     294_aa hslO 33 kDa chaperonin
2528 JAKRKH010000011.1 GCA_022568975.1_02528 CDS open 6865-8952 2088_na     695_aa ftsH ATP-dependent zinc metalloprotease FtsH
2529 JAKRKH010000011.1 GCA_022568975.1_02529 CDS open 9230-9769 540_na     179_aa hpt Hypoxanthine-guanine phosphoribosyltransferase
2530 JAKRKH010000011.1 GCA_022568975.1_02530 CDS open 9772-11064 1293_na     430_aa tilS tRNA(Ile)-lysidine synthase
2531 JAKRKH010000011.1 GCA_022568975.1_02531 CDS open 11168-11566 399_na     132_aa yugI_2 General stress protein 13
2532 JAKRKH010000011.1 GCA_022568975.1_02532 CDS open 11734-12132 399_na     132_aa divIC Cell division protein DivIC
2533 JAKRKH010000011.1 GCA_022568975.1_02533 CDS open 12156-12434 279_na     92_aa hypothetical protein
2534 JAKRKH010000011.1 GCA_022568975.1_02534 CDS open 12431-13621 1191_na     396_aa hypothetical protein
2535 JAKRKH010000011.1 GCA_022568975.1_02535 CDS open 13623-15152 1530_na     509_aa hypothetical protein
2536 JAKRKH010000011.1 GCA_022568975.1_02536 CDS open 15130-18651 3522_na     1173_aa mfd Transcription-repair-coupling factor
2537 JAKRKH010000011.1 GCA_022568975.1_02537 CDS open 18648-19220 573_na     190_aa pth Peptidyl-tRNA hydrolase
2538 JAKRKH010000011.1 GCA_022568975.1_02538 CDS open 19544-20194 651_na     216_aa rplY 50S ribosomal protein L25
2539 JAKRKH010000011.1 GCA_022568975.1_02539 CDS open 20352-21317 966_na     321_aa prs Ribose-phosphate pyrophosphokinase
2540 JAKRKH010000011.1 GCA_022568975.1_02540 CDS open 21470-22825 1356_na     451_aa glmU Bifunctional protein GlmU
2541 JAKRKH010000011.1 GCA_022568975.1_02541 CDS open 23033-23338 306_na     101_aa spoVG Putative septation protein SpoVG
2542 JAKRKH010000011.1 GCA_022568975.1_02542 CDS open 23410-23787 378_na     125_aa yabJ 2-iminobutanoate2-iminopropanoate deaminase
2543 JAKRKH010000011.1 GCA_022568975.1_02543 CDS open 23804-24628 825_na     274_aa purR_3 Pur operon repressor
2544 JAKRKH010000011.1 GCA_022568975.1_02544 CDS open 24642-25490 849_na     282_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2545 JAKRKH010000011.1 GCA_022568975.1_02545 CDS open 25737-26000 264_na     87_aa veg Protein Veg
2546 JAKRKH010000011.1 GCA_022568975.1_02546 CDS open 26100-26990 891_na     296_aa rsmA Ribosomal RNA small subunit methyltransferase A
2547 JAKRKH010000011.1 GCA_022568975.1_02547 CDS open 26990-27541 552_na     183_aa rnmV_2 Ribonuclease M5
2548 JAKRKH010000011.1 GCA_022568975.1_02548 CDS open 27681-28451 771_na     256_aa dtd3 D-aminoacyl-tRNA deacylase
2549 JAKRKH010000011.1 GCA_022568975.1_02549 CDS open 28477-30450 1974_na     657_aa metG Methionine--tRNA ligase
2550 JAKRKH010000011.1 GCA_022568975.1_02550 CDS open 30679-31524 846_na     281_aa rsmI Ribosomal RNA small subunit methyltransferase I
2551 JAKRKH010000011.1 GCA_022568975.1_02551 CDS open 31526-31774 249_na     82_aa hypothetical protein
2552 JAKRKH010000011.1 GCA_022568975.1_02552 CDS open 31767-32492 726_na     241_aa yfiC tRNA1(Val) (adenine(37)-N6)-methyltransferase
2553 JAKRKH010000011.1 GCA_022568975.1_02553 CDS open 32585-32932 348_na     115_aa yabA Initiation-control protein YabA
2554 JAKRKH010000011.1 GCA_022568975.1_02554 CDS open 32949-33752 804_na     267_aa hypothetical protein
2555 JAKRKH010000011.1 GCA_022568975.1_02555 CDS open 33753-34679 927_na     308_aa hypothetical protein
2556 JAKRKH010000011.1 GCA_022568975.1_02556 CDS open 34976-35305 330_na     109_aa darA Cyclic di-AMP receptor A
2557 JAKRKH010000011.1 GCA_022568975.1_02557 CDS open 35333-35950 618_na     205_aa tmk Thymidylate kinase
2558 JAKRKH010000011.1 GCA_022568975.1_02558 CDS open 35954-37297 1344_na     447_aa speA Arginine decarboxylase
2559 JAKRKH010000011.1 GCA_022568975.1_02559 CDS open 37323-37850 528_na     175_aa speG Spermidine N(1)-acetyltransferase
2560 JAKRKH010000011.1 misc_RNA open 38083-38315 S35
2561 JAKRKH010000011.1 GCA_022568975.1_02561 CDS open 38395-44577 6183_na     2060_aa pqqA Coenzyme PQQ synthesis protein A
2562 JAKRKH010000011.1 GCA_022568975.1_02562 CDS open 44844-46160 1317_na     438_aa ISL3 family transposase ISSha1
2563 JAKRKH010000012.1 rRNA open 18-2935 23S ribosomal RNA
2564 JAKRKH010000013.1 misc_RNA open 58-283 tsr24
2565 JAKRKH010000015.1 rRNA open 44-1589 16S ribosomal RNA
2566 JAKRKH010000019.1 tRNA open 9-84 tRNA-Val(tac)
2567 JAKRKH010000019.1 tRNA open 93-168 tRNA-Thr(tgt)
2568 JAKRKH010000019.1 tRNA open 182-257 tRNA-Lys(ttt)
2569 JAKRKH010000019.1 tRNA open 265-346 tRNA-Leu(tag)
2570 JAKRKH010000021.1 tRNA open 9-83 tRNA-Arg(acg)
2571 JAKRKH010000021.1 tRNA open 106-180 tRNA-Pro(tgg)
2572 JAKRKH010000021.1 tRNA open 194-269 tRNA-Ala(tgc)
2573 JAKRKH010000024.1 tRNA open 15-91 tRNA-Ile(gat)
2574 JAKRKH010000024.1 tRNA open 101-176 tRNA-Ala(tgc)