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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_022569085.1)

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PROKKA Annotations for GCA_022569085.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
32 2649731 2504 4 1 56
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:6]    |    Number of Records Found: 2652 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JAKRKL010000005.1 GCA_022569085.1_02501 CDS open 42754-43788 1035_na     344_aa ywlC Threonylcarbamoyl-AMP synthase
2502 JAKRKL010000005.1 GCA_022569085.1_02502 CDS open 43794-44216 423_na     140_aa ptpB Low molecular weight protein-tyrosine-phosphatase PtpB
2503 JAKRKL010000005.1 GCA_022569085.1_02503 CDS open 44325-44849 525_na     174_aa hypothetical protein
2504 JAKRKL010000005.1 GCA_022569085.1_02504 CDS open 44872-46110 1239_na     412_aa glyA Serine hydroxymethyltransferase
2505 JAKRKL010000005.1 GCA_022569085.1_02505 CDS open 46132-46761 630_na     209_aa upp Uracil phosphoribosyltransferase
2506 JAKRKL010000005.1 GCA_022569085.1_02506 CDS open 47042-47392 351_na     116_aa hypothetical protein
2507 JAKRKL010000005.1 GCA_022569085.1_02507 CDS open 47419-48147 729_na     242_aa atpB ATP synthase subunit a
2508 JAKRKL010000005.1 GCA_022569085.1_02508 CDS open 48179-48391 213_na     70_aa atpE ATP synthase subunit c
2509 JAKRKL010000005.1 GCA_022569085.1_02509 CDS open 48483-49007 525_na     174_aa atpF ATP synthase subunit b
2510 JAKRKL010000005.1 GCA_022569085.1_02510 CDS open 49007-49546 540_na     179_aa atpH ATP synthase subunit delta
2511 JAKRKL010000005.1 GCA_022569085.1_02511 CDS open 49566-51074 1509_na     502_aa atpA ATP synthase subunit alpha
2512 JAKRKL010000005.1 GCA_022569085.1_02512 CDS open 51106-51972 867_na     288_aa atpG ATP synthase gamma chain
2513 JAKRKL010000005.1 GCA_022569085.1_02513 CDS open 51994-53406 1413_na     470_aa atpD ATP synthase subunit beta
2514 JAKRKL010000005.1 GCA_022569085.1_02514 CDS open 53428-53829 402_na     133_aa atpC ATP synthase epsilon chain
2515 JAKRKL010000005.1 GCA_022569085.1_02515 CDS open 53967-54200 234_na     77_aa hypothetical protein
2516 JAKRKL010000005.1 GCA_022569085.1_02516 CDS open 54364-55629 1266_na     421_aa murA1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
2517 JAKRKL010000005.1 GCA_022569085.1_02517 CDS open 55666-56106 441_na     146_aa fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
2518 JAKRKL010000005.1 GCA_022569085.1_02518 CDS open 56503-56955 453_na     150_aa hypothetical protein
2519 JAKRKL010000005.1 GCA_022569085.1_02519 CDS open 57144-57545 402_na     133_aa Single-stranded DNA-binding protein
2520 JAKRKL010000005.1 GCA_022569085.1_02520 CDS open 58024-58731 708_na     235_aa sceD putative transglycosylase SceD
2521 JAKRKL010000005.1 misc_RNA open 58954-59057 TPP
2522 JAKRKL010000005.1 GCA_022569085.1_02522 CDS open 59144-59821 678_na     225_aa tenA Aminopyrimidine aminohydrolase
2523 JAKRKL010000005.1 GCA_022569085.1_02523 CDS open 59826-60647 822_na     273_aa thiD Hydroxymethylpyrimidinephosphomethylpyrimidine kinase
2524 JAKRKL010000005.1 GCA_022569085.1_02524 CDS open 60640-61428 789_na     262_aa thiM Hydroxyethylthiazole kinase
2525 JAKRKL010000005.1 GCA_022569085.1_02525 CDS open 61431-62069 639_na     212_aa thiE Thiamine-phosphate synthase
2526 JAKRKL010000005.1 GCA_022569085.1_02526 CDS open 62159-63034 876_na     291_aa yidC_3 Membrane protein insertase YidC
2527 JAKRKL010000005.1 GCA_022569085.1_02527 CDS open 63418-64059 642_na     213_aa yedJ putative protein YedJ
2528 JAKRKL010000005.1 GCA_022569085.1_02528 CDS open 64181-65665 1485_na     494_aa cls_2 Cardiolipin synthase
2529 JAKRKL010000005.1 GCA_022569085.1_02529 CDS open 65822-66124 303_na     100_aa csoR Copper-sensing transcriptional repressor CsoR
2530 JAKRKL010000005.1 GCA_022569085.1_02530 CDS open 66137-66349 213_na     70_aa hypothetical protein
2531 JAKRKL010000005.1 GCA_022569085.1_02531 CDS open 66440-66577 138_na     45_aa hypothetical protein
2532 JAKRKL010000005.1 GCA_022569085.1_02532 CDS open 66992-68182 1191_na     396_aa rodA Peptidoglycan glycosyltransferase RodA
2533 JAKRKL010000005.1 GCA_022569085.1_02533 CDS open 68538-69608 1071_na     356_aa ddl D-alanine--D-alanine ligase
2534 JAKRKL010000005.1 GCA_022569085.1_02534 CDS open 69626-70984 1359_na     452_aa murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
2535 JAKRKL010000005.1 GCA_022569085.1_02535 CDS open 71219-72733 1515_na     504_aa cshA DEAD-box ATP-dependent RNA helicase CshA
2536 JAKRKL010000005.1 GCA_022569085.1_02536 CDS open 73058-73540 483_na     160_aa hypothetical protein
2537 JAKRKL010000005.1 GCA_022569085.1_02537 CDS open 73533-75047 1515_na     504_aa hypothetical protein
2538 JAKRKL010000005.1 GCA_022569085.1_02538 CDS open 75034-75546 513_na     170_aa hypothetical protein
2539 JAKRKL010000005.1 GCA_022569085.1_02539 CDS open 75558-75950 393_na     130_aa acpS Holo-[acyl-carrier-protein] synthase
2540 JAKRKL010000005.1 GCA_022569085.1_02540 CDS open 75998-77146 1149_na     382_aa alr1 Alanine racemase 1
2541 JAKRKL010000005.1 GCA_022569085.1_02541 CDS open 77233-77403 171_na     56_aa mazE Antitoxin MazE
2542 JAKRKL010000005.1 GCA_022569085.1_02542 CDS open 77400-77750 351_na     116_aa mazF Endoribonuclease MazF
2543 JAKRKL010000005.1 GCA_022569085.1_02543 CDS open 78184-79185 1002_na     333_aa rsbU Phosphoserine phosphatase RsbU
2544 JAKRKL010000005.1 GCA_022569085.1_02544 CDS open 79276-79602 327_na     108_aa rsbV Anti-sigma-B factor antagonist
2545 JAKRKL010000005.1 GCA_022569085.1_02545 CDS open 79604-80083 480_na     159_aa rsbW Serine-protein kinase RsbW
2546 JAKRKL010000005.1 GCA_022569085.1_02546 CDS open 80058-80828 771_na     256_aa sigB RNA polymerase sigma-B factor
2547 JAKRKL010000005.1 GCA_022569085.1_02547 CDS open 80947-83097 2151_na     716_aa yhgF Protein YhgF
2548 JAKRKL010000005.1 GCA_022569085.1_02548 CDS open 83090-83548 459_na     152_aa Protein SprT-like protein
2549 JAKRKL010000005.1 tRNA open 83856-83941 tRNA-Leu(gag)
2550 JAKRKL010000005.1 tRNA open 83958-84029 tRNA-Gly(tcc)
2551 JAKRKL010000006.1 GCA_022569085.1_02551 CDS open 174-1490 1317_na     438_aa ISL3 family transposase ISSha1
2552 JAKRKL010000006.1 GCA_022569085.1_02552 CDS open 1757-8542 6786_na     2261_aa pqqA Coenzyme PQQ synthesis protein A
2553 JAKRKL010000006.1 misc_RNA open 8622-8854 S35
2554 JAKRKL010000006.1 GCA_022569085.1_02554 CDS open 9087-9614 528_na     175_aa speG Spermidine N(1)-acetyltransferase
2555 JAKRKL010000006.1 GCA_022569085.1_02555 CDS open 9640-10983 1344_na     447_aa speA Arginine decarboxylase
2556 JAKRKL010000006.1 GCA_022569085.1_02556 CDS open 10987-11604 618_na     205_aa tmk Thymidylate kinase
2557 JAKRKL010000006.1 GCA_022569085.1_02557 CDS open 11632-11961 330_na     109_aa darA Cyclic di-AMP receptor A
2558 JAKRKL010000006.1 GCA_022569085.1_02558 CDS open 12258-13184 927_na     308_aa hypothetical protein
2559 JAKRKL010000006.1 GCA_022569085.1_02559 CDS open 13185-13988 804_na     267_aa hypothetical protein
2560 JAKRKL010000006.1 GCA_022569085.1_02560 CDS open 14005-14352 348_na     115_aa yabA Initiation-control protein YabA
2561 JAKRKL010000006.1 GCA_022569085.1_02561 CDS open 14445-15170 726_na     241_aa yfiC tRNA1(Val) (adenine(37)-N6)-methyltransferase
2562 JAKRKL010000006.1 GCA_022569085.1_02562 CDS open 15163-15411 249_na     82_aa hypothetical protein
2563 JAKRKL010000006.1 GCA_022569085.1_02563 CDS open 15413-16258 846_na     281_aa rsmI Ribosomal RNA small subunit methyltransferase I
2564 JAKRKL010000006.1 GCA_022569085.1_02564 CDS open 16487-18460 1974_na     657_aa metG Methionine--tRNA ligase
2565 JAKRKL010000006.1 GCA_022569085.1_02565 CDS open 18486-19256 771_na     256_aa dtd3 D-aminoacyl-tRNA deacylase
2566 JAKRKL010000006.1 GCA_022569085.1_02566 CDS open 19396-19947 552_na     183_aa rnmV_2 Ribonuclease M5
2567 JAKRKL010000006.1 GCA_022569085.1_02567 CDS open 19947-20837 891_na     296_aa rsmA Ribosomal RNA small subunit methyltransferase A
2568 JAKRKL010000006.1 GCA_022569085.1_02568 CDS open 20937-21200 264_na     87_aa veg Protein Veg
2569 JAKRKL010000006.1 GCA_022569085.1_02569 CDS open 21447-22295 849_na     282_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2570 JAKRKL010000006.1 GCA_022569085.1_02570 CDS open 22309-23133 825_na     274_aa purR_3 Pur operon repressor
2571 JAKRKL010000006.1 GCA_022569085.1_02571 CDS open 23150-23527 378_na     125_aa yabJ 2-iminobutanoate2-iminopropanoate deaminase
2572 JAKRKL010000006.1 GCA_022569085.1_02572 CDS open 23599-23904 306_na     101_aa spoVG Putative septation protein SpoVG
2573 JAKRKL010000006.1 GCA_022569085.1_02573 CDS open 24112-25467 1356_na     451_aa glmU Bifunctional protein GlmU
2574 JAKRKL010000006.1 GCA_022569085.1_02574 CDS open 25620-26585 966_na     321_aa prs Ribose-phosphate pyrophosphokinase
2575 JAKRKL010000006.1 GCA_022569085.1_02575 CDS open 26743-27393 651_na     216_aa rplY 50S ribosomal protein L25
2576 JAKRKL010000006.1 GCA_022569085.1_02576 CDS open 27717-28289 573_na     190_aa pth Peptidyl-tRNA hydrolase
2577 JAKRKL010000006.1 GCA_022569085.1_02577 CDS open 28286-31807 3522_na     1173_aa mfd Transcription-repair-coupling factor
2578 JAKRKL010000006.1 GCA_022569085.1_02578 CDS open 31785-33314 1530_na     509_aa hypothetical protein
2579 JAKRKL010000006.1 GCA_022569085.1_02579 CDS open 33316-34506 1191_na     396_aa hypothetical protein
2580 JAKRKL010000006.1 GCA_022569085.1_02580 CDS open 34503-34781 279_na     92_aa hypothetical protein
2581 JAKRKL010000006.1 GCA_022569085.1_02581 CDS open 34805-35203 399_na     132_aa divIC Cell division protein DivIC
2582 JAKRKL010000006.1 GCA_022569085.1_02582 CDS open 35371-35769 399_na     132_aa yugI_2 General stress protein 13
2583 JAKRKL010000006.1 GCA_022569085.1_02583 CDS open 35873-37165 1293_na     430_aa tilS tRNA(Ile)-lysidine synthase
2584 JAKRKL010000006.1 GCA_022569085.1_02584 CDS open 37168-37707 540_na     179_aa hpt Hypoxanthine-guanine phosphoribosyltransferase
2585 JAKRKL010000006.1 GCA_022569085.1_02585 CDS open 37985-40072 2088_na     695_aa ftsH ATP-dependent zinc metalloprotease FtsH
2586 JAKRKL010000006.1 GCA_022569085.1_02586 CDS open 40253-41137 885_na     294_aa hslO 33 kDa chaperonin
2587 JAKRKL010000006.1 GCA_022569085.1_02587 CDS open 41314-42246 933_na     310_aa cysK Cysteine synthase
2588 JAKRKL010000006.1 GCA_022569085.1_02588 CDS open 42468-43271 804_na     267_aa folP Dihydropteroate synthase
2589 JAKRKL010000006.1 GCA_022569085.1_02589 CDS open 43249-43614 366_na     121_aa folB Dihydroneopterin aldolase
2590 JAKRKL010000006.1 GCA_022569085.1_02590 CDS open 43615-44094 480_na     159_aa folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2591 JAKRKL010000006.1 GCA_022569085.1_02591 CDS open 44619-46106 1488_na     495_aa lysS Lysine--tRNA ligase
2592 JAKRKL010000006.1 rRNA open 46518-46626 5S ribosomal RNA
2593 JAKRKL010000006.1 tRNA open 46642-46717 tRNA-Val(tac)
2594 JAKRKL010000006.1 tRNA open 46726-46801 tRNA-Thr(tgt)
2595 JAKRKL010000006.1 tRNA open 46807-46881 tRNA-Lys(ttt)
2596 JAKRKL010000007.1 GCA_022569085.1_02596 CDS open 584-862 279_na     92_aa hypothetical protein
2597 JAKRKL010000007.1 GCA_022569085.1_02597 CDS open 869-1606 738_na     245_aa hypothetical protein
2598 JAKRKL010000007.1 GCA_022569085.1_02598 CDS open 1603-2355 753_na     250_aa hypothetical protein
2599 JAKRKL010000007.1 GCA_022569085.1_02599 CDS open 2356-3264 909_na     302_aa btuD_7 Vitamin B12 import ATP-binding protein BtuD
2600 JAKRKL010000007.1 GCA_022569085.1_02600 CDS open 3807-4418 612_na     203_aa bin3 Putative transposon Tn552 DNA-invertase bin3
2601 JAKRKL010000007.1 GCA_022569085.1_02601 CDS open 4435-4800 366_na     121_aa hypothetical protein
2602 JAKRKL010000007.1 GCA_022569085.1_02602 CDS open 4803-5180 378_na     125_aa hypothetical protein
2603 JAKRKL010000007.1 GCA_022569085.1_02603 CDS open 5480-5929 450_na     149_aa hypothetical protein
2604 JAKRKL010000007.1 GCA_022569085.1_02604 CDS open 5926-7119 1194_na     397_aa hypothetical protein
2605 JAKRKL010000007.1 GCA_022569085.1_02605 CDS open 7112-7636 525_na     174_aa hypothetical protein
2606 JAKRKL010000007.1 GCA_022569085.1_02606 CDS open 7648-8085 438_na     145_aa hypothetical protein
2607 JAKRKL010000007.1 GCA_022569085.1_02607 CDS open 8336-10399 2064_na     687_aa hypothetical protein
2608 JAKRKL010000007.1 GCA_022569085.1_02608 CDS open 10392-12239 1848_na     615_aa hypothetical protein
2609 JAKRKL010000007.1 GCA_022569085.1_02609 CDS open 12832-13077 246_na     81_aa hypothetical protein
2610 JAKRKL010000007.1 misc_RNA open 13240-13342 fstAT
2611 JAKRKL010000008.1 GCA_022569085.1_02611 CDS open 53-514 462_na     153_aa hypothetical protein
2612 JAKRKL010000008.1 GCA_022569085.1_02612 CDS open 1332-1934 603_na     200_aa hypothetical protein
2613 JAKRKL010000008.1 GCA_022569085.1_02613 CDS open 2125-2436 312_na     103_aa hypothetical protein
2614 JAKRKL010000008.1 GCA_022569085.1_02614 CDS open 2442-3653 1212_na     403_aa hypothetical protein
2615 JAKRKL010000008.1 GCA_022569085.1_02615 CDS open 3685-4107 423_na     140_aa hypothetical protein
2616 JAKRKL010000008.1 GCA_022569085.1_02616 CDS open 4311-4991 681_na     226_aa scdA_2 Iron-sulfur cluster repair protein ScdA
2617 JAKRKL010000008.1 GCA_022569085.1_02617 CDS open 5162-6307 1146_na     381_aa hmp_2 Flavohemoprotein
2618 JAKRKL010000008.1 GCA_022569085.1_02618 CDS open 6327-6515 189_na     62_aa hypothetical protein
2619 JAKRKL010000008.1 GCA_022569085.1_02619 CDS open 6568-7284 717_na     238_aa hypothetical protein
2620 JAKRKL010000008.1 GCA_022569085.1_02620 CDS open 7504-8748 1245_na     414_aa femA_4 Aminoacyltransferase FemA
2621 JAKRKL010000009.1 GCA_022569085.1_02621 CDS open 149-1258 1110_na     369_aa hypothetical protein
2622 JAKRKL010000009.1 GCA_022569085.1_02622 CDS open 1240-1578 339_na     112_aa hypothetical protein
2623 JAKRKL010000009.1 GCA_022569085.1_02623 CDS open 2416-2904 489_na     162_aa hypothetical protein
2624 JAKRKL010000009.1 GCA_022569085.1_02624 CDS open 3178-3687 510_na     169_aa hypothetical protein
2625 JAKRKL010000009.1 GCA_022569085.1_02625 CDS open 3704-3964 261_na     86_aa hypothetical protein
2626 JAKRKL010000010.1 rRNA open 78-2995 23S ribosomal RNA
2627 JAKRKL010000011.1 GCA_022569085.1_02627 CDS open 331-1323 993_na     330_aa hypothetical protein
2628 JAKRKL010000011.1 GCA_022569085.1_02628 CDS open 1353-2054 702_na     233_aa hypothetical protein
2629 JAKRKL010000011.1 GCA_022569085.1_02629 CDS open 2075-2350 276_na     91_aa hypothetical protein
2630 JAKRKL010000012.1 GCA_022569085.1_02630 CDS open 111-356 246_na     81_aa hypothetical protein
2631 JAKRKL010000012.1 GCA_022569085.1_02631 CDS open 481-1653 1173_na     390_aa ymfD Bacillibactin exporter
2632 JAKRKL010000012.1 GCA_022569085.1_02632 CDS open 1646-2113 468_na     155_aa pchR HTH-type transcriptional regulator PchR
2633 JAKRKL010000013.1 GCA_022569085.1_02633 CDS open 401-1405 1005_na     334_aa hypothetical protein
2634 JAKRKL010000015.1 GCA_022569085.1_02634 CDS open 20-256 237_na     78_aa hypothetical protein
2635 JAKRKL010000015.1 misc_RNA open 384-484 fstAT
2636 JAKRKL010000015.1 GCA_022569085.1_02636 CDS open 688-1035 348_na     115_aa cadC Cadmium resistance transcriptional regulatory protein CadC
2637 JAKRKL010000015.1 GCA_022569085.1_02637 CDS open 1054-1671 618_na     205_aa hypothetical protein
2638 JAKRKL010000016.1 GCA_022569085.1_02638 CDS open 3-194 192_na     63_aa hypothetical protein
2639 JAKRKL010000016.1 GCA_022569085.1_02639 CDS open 832-1551 720_na     239_aa hypothetical protein
2640 JAKRKL010000017.1 rRNA open 6-1553 16S ribosomal RNA
2641 JAKRKL010000018.1 GCA_022569085.1_02641 CDS open 12-806 795_na     264_aa parA Chromosome partitioning protein ParA
2642 JAKRKL010000018.1 GCA_022569085.1_02642 CDS open 812-1012 201_na     66_aa hypothetical protein
2643 JAKRKL010000019.1 GCA_022569085.1_02643 CDS open 448-783 336_na     111_aa hypothetical protein
2644 JAKRKL010000022.1 tRNA open 9-84 tRNA-Val(tac)
2645 JAKRKL010000022.1 tRNA open 93-168 tRNA-Thr(tgt)
2646 JAKRKL010000022.1 tRNA open 182-257 tRNA-Lys(ttt)
2647 JAKRKL010000022.1 tRNA open 265-346 tRNA-Leu(tag)
2648 JAKRKL010000025.1 tRNA open 9-83 tRNA-Arg(acg)
2649 JAKRKL010000025.1 tRNA open 106-180 tRNA-Pro(tgg)
2650 JAKRKL010000025.1 tRNA open 194-269 tRNA-Ala(tgc)
2651 JAKRKL010000029.1 tRNA open 46-121 tRNA-Ala(tgc)
2652 JAKRKL010000029.1 tRNA open 131-207 tRNA-Ile(gat)