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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_022569135.1)

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PROKKA Annotations for GCA_022569135.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
37 2576831 2423 4 1 54
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:6]    |    Number of Records Found: 2569 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JAKRKO010000014.1 GCA_022569135.1_02501 CDS open 26101-26991 891_na     296_aa rsmA Ribosomal RNA small subunit methyltransferase A
2502 JAKRKO010000014.1 GCA_022569135.1_02502 CDS open 26991-27542 552_na     183_aa rnmV_2 Ribonuclease M5
2503 JAKRKO010000014.1 GCA_022569135.1_02503 CDS open 27682-28452 771_na     256_aa dtd3 D-aminoacyl-tRNA deacylase
2504 JAKRKO010000014.1 GCA_022569135.1_02504 CDS open 28478-30451 1974_na     657_aa metG Methionine--tRNA ligase
2505 JAKRKO010000014.1 GCA_022569135.1_02505 CDS open 30680-31525 846_na     281_aa rsmI Ribosomal RNA small subunit methyltransferase I
2506 JAKRKO010000014.1 GCA_022569135.1_02506 CDS open 31527-31775 249_na     82_aa hypothetical protein
2507 JAKRKO010000014.1 GCA_022569135.1_02507 CDS open 31768-32493 726_na     241_aa yfiC tRNA1(Val) (adenine(37)-N6)-methyltransferase
2508 JAKRKO010000014.1 GCA_022569135.1_02508 CDS open 32586-32933 348_na     115_aa yabA Initiation-control protein YabA
2509 JAKRKO010000014.1 GCA_022569135.1_02509 CDS open 32950-33753 804_na     267_aa hypothetical protein
2510 JAKRKO010000014.1 GCA_022569135.1_02510 CDS open 33754-34680 927_na     308_aa hypothetical protein
2511 JAKRKO010000014.1 GCA_022569135.1_02511 CDS open 34977-35306 330_na     109_aa darA Cyclic di-AMP receptor A
2512 JAKRKO010000014.1 GCA_022569135.1_02512 CDS open 35334-35951 618_na     205_aa tmk Thymidylate kinase
2513 JAKRKO010000014.1 GCA_022569135.1_02513 CDS open 35955-37298 1344_na     447_aa speA Arginine decarboxylase
2514 JAKRKO010000014.1 GCA_022569135.1_02514 CDS open 37324-37851 528_na     175_aa speG Spermidine N(1)-acetyltransferase
2515 JAKRKO010000014.1 misc_RNA open 38084-38316 S35
2516 JAKRKO010000014.1 GCA_022569135.1_02516 CDS open 38396-39793 1398_na     465_aa hypothetical protein
2517 JAKRKO010000015.1 GCA_022569135.1_02517 CDS open 53-1678 1626_na     541_aa betL Glycine betaine transporter BetL
2518 JAKRKO010000015.1 GCA_022569135.1_02518 CDS open 2545-3837 1293_na     430_aa dcuA Anaerobic C4-dicarboxylate transporter DcuA
2519 JAKRKO010000015.1 GCA_022569135.1_02519 CDS open 4006-4125 120_na     39_aa hypothetical protein
2520 JAKRKO010000015.1 GCA_022569135.1_02520 CDS open 4191-4727 537_na     178_aa hypothetical protein
2521 JAKRKO010000015.1 GCA_022569135.1_02521 CDS open 4729-6576 1848_na     615_aa nrdD Anaerobic ribonucleoside-triphosphate reductase
2522 JAKRKO010000015.1 GCA_022569135.1_02522 CDS open 6774-7544 771_na     256_aa ssaA_2 Staphylococcal secretory antigen SsaA
2523 JAKRKO010000015.1 GCA_022569135.1_02523 CDS open 7933-9153 1221_na     406_aa dapE putative succinyl-diaminopimelate desuccinylase
2524 JAKRKO010000015.1 GCA_022569135.1_02524 CDS open 9459-10058 600_na     199_aa cysC putative adenylyl-sulfate kinase
2525 JAKRKO010000015.1 GCA_022569135.1_02525 CDS open 10075-11253 1179_na     392_aa sat Sulfate adenylyltransferase
2526 JAKRKO010000015.1 GCA_022569135.1_02526 CDS open 11276-12175 900_na     299_aa hypothetical protein
2527 JAKRKO010000015.1 GCA_022569135.1_02527 CDS open 12193-12804 612_na     203_aa sirC Precorrin-2 dehydrogenase
2528 JAKRKO010000015.1 GCA_022569135.1_02528 CDS open 12825-13604 780_na     259_aa sumT Uroporphyrinogen-III C-methyltransferase
2529 JAKRKO010000015.1 GCA_022569135.1_02529 CDS open 13628-15346 1719_na     572_aa cysI Sulfite reductase [NADPH] hemoprotein beta-component
2530 JAKRKO010000015.1 GCA_022569135.1_02530 CDS open 15367-17211 1845_na     614_aa cysJ Sulfite reductase [NADPH] flavoprotein alpha-component
2531 JAKRKO010000015.1 GCA_022569135.1_02531 CDS open 17344-18075 732_na     243_aa cysH Phosphoadenosine phosphosulfate reductase
2532 JAKRKO010000015.1 GCA_022569135.1_02532 CDS open 18390-24944 6555_na     2184_aa hypothetical protein
2533 JAKRKO010000015.1 GCA_022569135.1_02533 CDS open 25361-28396 3036_na     1011_aa hypothetical protein
2534 JAKRKO010000016.1 GCA_022569135.1_02534 CDS open 1479-2228 750_na     249_aa hypothetical protein
2535 JAKRKO010000016.1 misc_RNA open 2397-2486 fstAT
2536 JAKRKO010000016.1 GCA_022569135.1_02536 CDS open 2837-3238 402_na     133_aa hypothetical protein
2537 JAKRKO010000016.1 GCA_022569135.1_02537 CDS open 3426-3986 561_na     186_aa Putative cytokinin riboside 5-monophosphate phosphoribohydrolase
2538 JAKRKO010000016.1 GCA_022569135.1_02538 CDS open 4228-4833 606_na     201_aa hypothetical protein
2539 JAKRKO010000016.1 GCA_022569135.1_02539 CDS open 4894-5076 183_na     60_aa hypothetical protein
2540 JAKRKO010000016.1 GCA_022569135.1_02540 CDS open 5271-7184 1914_na     637_aa hypothetical protein
2541 JAKRKO010000016.1 GCA_022569135.1_02541 CDS open 7389-7670 282_na     93_aa hypothetical protein
2542 JAKRKO010000016.1 GCA_022569135.1_02542 CDS open 7675-7905 231_na     76_aa hypothetical protein
2543 JAKRKO010000016.1 GCA_022569135.1_02543 CDS open 8307-9233 927_na     308_aa hypothetical protein
2544 JAKRKO010000016.1 GCA_022569135.1_02544 CDS open 9662-10429 768_na     255_aa hypothetical protein
2545 JAKRKO010000016.1 GCA_022569135.1_02545 CDS open 11193-11333 141_na     46_aa hypothetical protein
2546 JAKRKO010000016.1 GCA_022569135.1_02546 CDS open 11438-11536 99_na     32_aa hypothetical protein
2547 JAKRKO010000017.1 GCA_022569135.1_02547 CDS open 199-603 405_na     134_aa hypothetical protein
2548 JAKRKO010000017.1 GCA_022569135.1_02548 CDS open 549-1514 966_na     321_aa ISL3 family transposase ISSha1
2549 JAKRKO010000018.1 GCA_022569135.1_02549 CDS open 689-1300 612_na     203_aa hypothetical protein
2550 JAKRKO010000018.1 GCA_022569135.1_02550 CDS open 1348-2205 858_na     285_aa hypothetical protein
2551 JAKRKO010000018.1 GCA_022569135.1_02551 CDS open 2889-4097 1209_na     402_aa hypothetical protein
2552 JAKRKO010000018.1 GCA_022569135.1_02552 CDS open 4552-5004 453_na     150_aa hypothetical protein
2553 JAKRKO010000018.1 GCA_022569135.1_02553 CDS open 5295-5669 375_na     124_aa hypothetical protein
2554 JAKRKO010000019.1 GCA_022569135.1_02554 CDS open 1-561 561_na     186_aa opcR HTH-type transcriptional repressor OpcR
2555 JAKRKO010000019.1 GCA_022569135.1_02555 CDS open 929-2419 1491_na     496_aa gbsA Betaine aldehyde dehydrogenase
2556 JAKRKO010000019.1 GCA_022569135.1_02556 CDS open 2511-4217 1707_na     568_aa betA Oxygen-dependent choline dehydrogenase
2557 JAKRKO010000020.1 rRNA open 18-2935 23S ribosomal RNA
2558 JAKRKO010000020.1 rRNA open 3007-3114 5S ribosomal RNA
2559 JAKRKO010000022.1 rRNA open 78-1625 16S ribosomal RNA
2560 JAKRKO010000023.1 GCA_022569135.1_02560 CDS open 721-1323 603_na     200_aa bin3 Putative transposon Tn552 DNA-invertase bin3
2561 JAKRKO010000025.1 GCA_022569135.1_02561 CDS open 31-942 912_na     303_aa hypothetical protein
2562 JAKRKO010000026.1 GCA_022569135.1_02562 CDS open 57-731 675_na     224_aa IS6 family transposase ISSau6
2563 JAKRKO010000033.1 tRNA open 1-76 tRNA-Val(tac)
2564 JAKRKO010000033.1 tRNA open 85-160 tRNA-Thr(tgt)
2565 JAKRKO010000033.1 tRNA open 174-249 tRNA-Lys(ttt)
2566 JAKRKO010000033.1 tRNA open 257-338 tRNA-Leu(tag)
2567 JAKRKO010000035.1 tRNA open 9-83 tRNA-Arg(acg)
2568 JAKRKO010000035.1 tRNA open 106-180 tRNA-Pro(tgg)
2569 JAKRKO010000035.1 tRNA open 194-269 tRNA-Ala(tgc)