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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_022569275.1)

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PROKKA Annotations for GCA_022569275.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
17 2634709 2504 4 1 56
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:6]    |    Number of Records Found: 2652 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JAKRKV010000005.1 GCA_022569275.1_02501 CDS open 39638-40831 1194_na     397_aa yciC Putative metal chaperone YciC
2502 JAKRKV010000005.1 GCA_022569275.1_02502 CDS open 40927-41745 819_na     272_aa attM N-acyl homoserine lactonase AttM
2503 JAKRKV010000005.1 GCA_022569275.1_02503 CDS open 41763-42188 426_na     141_aa hypothetical protein
2504 JAKRKV010000005.1 GCA_022569275.1_02504 CDS open 42294-43160 867_na     288_aa hypothetical protein
2505 JAKRKV010000005.1 GCA_022569275.1_02505 CDS open 43377-44918 1542_na     513_aa guaA GMP synthase [glutamine-hydrolyzing]
2506 JAKRKV010000005.1 GCA_022569275.1_02506 CDS open 45047-46513 1467_na     488_aa guaB Inosine-5-monophosphate dehydrogenase
2507 JAKRKV010000005.1 GCA_022569275.1_02507 CDS open 46550-47818 1269_na     422_aa pucK Uric acid permease PucK
2508 JAKRKV010000005.1 GCA_022569275.1_02508 CDS open 47815-48396 582_na     193_aa xpt Xanthine phosphoribosyltransferase
2509 JAKRKV010000005.1 misc_RNA open 48611-48713 Purine
2510 JAKRKV010000005.1 GCA_022569275.1_02510 CDS open 48930-49337 408_na     135_aa hypothetical protein
2511 JAKRKV010000005.1 GCA_022569275.1_02511 CDS open 49483-50154 672_na     223_aa hypothetical protein
2512 JAKRKV010000005.1 GCA_022569275.1_02512 CDS open 50271-51293 1023_na     340_aa putative protein
2513 JAKRKV010000005.1 GCA_022569275.1_02513 CDS open 51913-53301 1389_na     462_aa tcyP L-cystine uptake protein TcyP
2514 JAKRKV010000005.1 GCA_022569275.1_02514 CDS open 53485-54240 756_na     251_aa nfrA NADPH-dependent oxidoreductase
2515 JAKRKV010000005.1 GCA_022569275.1_02515 CDS open 54406-55185 780_na     259_aa mhpD 2-keto-4-pentenoate hydratase
2516 JAKRKV010000005.1 GCA_022569275.1_02516 CDS open 55712-56281 570_na     189_aa ahpC Alkyl hydroperoxide reductase C
2517 JAKRKV010000005.1 GCA_022569275.1_02517 CDS open 56299-57822 1524_na     507_aa ahpF Alkyl hydroperoxide reductase subunit F
2518 JAKRKV010000005.1 GCA_022569275.1_02518 CDS open 58238-58861 624_na     207_aa hypothetical protein
2519 JAKRKV010000005.1 GCA_022569275.1_02519 CDS open 59068-59319 252_na     83_aa hypothetical protein
2520 JAKRKV010000005.1 GCA_022569275.1_02520 CDS open 59544-60122 579_na     192_aa gpmA_2 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
2521 JAKRKV010000005.1 GCA_022569275.1_02521 CDS open 60593-60841 249_na     82_aa hypothetical protein
2522 JAKRKV010000005.1 GCA_022569275.1_02522 CDS open 60993-61223 231_na     76_aa hypothetical protein
2523 JAKRKV010000005.1 GCA_022569275.1_02523 CDS open 61461-61718 258_na     85_aa hypothetical protein
2524 JAKRKV010000005.1 GCA_022569275.1_02524 CDS open 62201-62365 165_na     54_aa hypothetical protein
2525 JAKRKV010000005.1 GCA_022569275.1_02525 CDS open 62707-62904 198_na     65_aa hypothetical protein
2526 JAKRKV010000005.1 GCA_022569275.1_02526 CDS open 63187-63393 207_na     68_aa hypothetical protein
2527 JAKRKV010000005.1 GCA_022569275.1_02527 CDS open 63824-64072 249_na     82_aa hypothetical protein
2528 JAKRKV010000005.1 GCA_022569275.1_02528 CDS open 65220-65642 423_na     140_aa hypothetical protein
2529 JAKRKV010000005.1 GCA_022569275.1_02529 CDS open 66115-66723 609_na     202_aa hypothetical protein
2530 JAKRKV010000005.1 GCA_022569275.1_02530 CDS open 66887-67288 402_na     133_aa hypothetical protein
2531 JAKRKV010000005.1 GCA_022569275.1_02531 CDS open 67314-67712 399_na     132_aa hypothetical protein
2532 JAKRKV010000005.1 GCA_022569275.1_02532 CDS open 67722-68126 405_na     134_aa hypothetical protein
2533 JAKRKV010000005.1 GCA_022569275.1_02533 CDS open 68312-68581 270_na     89_aa hypothetical protein
2534 JAKRKV010000006.1 tRNA open 56-130 tRNA-Lys(ttt)
2535 JAKRKV010000006.1 tRNA open 136-211 tRNA-Thr(tgt)
2536 JAKRKV010000006.1 tRNA open 220-295 tRNA-Val(tac)
2537 JAKRKV010000006.1 rRNA open 311-419 5S ribosomal RNA
2538 JAKRKV010000006.1 GCA_022569275.1_02538 CDS open 831-2318 1488_na     495_aa lysS Lysine--tRNA ligase
2539 JAKRKV010000006.1 GCA_022569275.1_02539 CDS open 2843-3322 480_na     159_aa folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2540 JAKRKV010000006.1 GCA_022569275.1_02540 CDS open 3323-3688 366_na     121_aa folB Dihydroneopterin aldolase
2541 JAKRKV010000006.1 GCA_022569275.1_02541 CDS open 3666-4469 804_na     267_aa folP Dihydropteroate synthase
2542 JAKRKV010000006.1 GCA_022569275.1_02542 CDS open 4691-5623 933_na     310_aa cysK Cysteine synthase
2543 JAKRKV010000006.1 GCA_022569275.1_02543 CDS open 5800-6684 885_na     294_aa hslO 33 kDa chaperonin
2544 JAKRKV010000006.1 GCA_022569275.1_02544 CDS open 6865-8952 2088_na     695_aa ftsH ATP-dependent zinc metalloprotease FtsH
2545 JAKRKV010000006.1 GCA_022569275.1_02545 CDS open 9230-9769 540_na     179_aa hpt Hypoxanthine-guanine phosphoribosyltransferase
2546 JAKRKV010000006.1 GCA_022569275.1_02546 CDS open 9772-11064 1293_na     430_aa tilS tRNA(Ile)-lysidine synthase
2547 JAKRKV010000006.1 GCA_022569275.1_02547 CDS open 11168-11566 399_na     132_aa yugI_2 General stress protein 13
2548 JAKRKV010000006.1 GCA_022569275.1_02548 CDS open 11734-12132 399_na     132_aa divIC Cell division protein DivIC
2549 JAKRKV010000006.1 GCA_022569275.1_02549 CDS open 12156-12434 279_na     92_aa hypothetical protein
2550 JAKRKV010000006.1 GCA_022569275.1_02550 CDS open 12431-13621 1191_na     396_aa hypothetical protein
2551 JAKRKV010000006.1 GCA_022569275.1_02551 CDS open 13623-15152 1530_na     509_aa hypothetical protein
2552 JAKRKV010000006.1 GCA_022569275.1_02552 CDS open 15130-18651 3522_na     1173_aa mfd Transcription-repair-coupling factor
2553 JAKRKV010000006.1 GCA_022569275.1_02553 CDS open 18648-19220 573_na     190_aa pth Peptidyl-tRNA hydrolase
2554 JAKRKV010000006.1 GCA_022569275.1_02554 CDS open 19544-20194 651_na     216_aa rplY 50S ribosomal protein L25
2555 JAKRKV010000006.1 GCA_022569275.1_02555 CDS open 20352-21317 966_na     321_aa prs Ribose-phosphate pyrophosphokinase
2556 JAKRKV010000006.1 GCA_022569275.1_02556 CDS open 21470-22825 1356_na     451_aa glmU Bifunctional protein GlmU
2557 JAKRKV010000006.1 GCA_022569275.1_02557 CDS open 23033-23338 306_na     101_aa spoVG Putative septation protein SpoVG
2558 JAKRKV010000006.1 GCA_022569275.1_02558 CDS open 23410-23787 378_na     125_aa yabJ 2-iminobutanoate2-iminopropanoate deaminase
2559 JAKRKV010000006.1 GCA_022569275.1_02559 CDS open 23804-24628 825_na     274_aa purR_3 Pur operon repressor
2560 JAKRKV010000006.1 GCA_022569275.1_02560 CDS open 24642-25490 849_na     282_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2561 JAKRKV010000006.1 GCA_022569275.1_02561 CDS open 25737-26000 264_na     87_aa veg Protein Veg
2562 JAKRKV010000006.1 GCA_022569275.1_02562 CDS open 26100-26990 891_na     296_aa rsmA Ribosomal RNA small subunit methyltransferase A
2563 JAKRKV010000006.1 GCA_022569275.1_02563 CDS open 26990-27541 552_na     183_aa rnmV_2 Ribonuclease M5
2564 JAKRKV010000006.1 GCA_022569275.1_02564 CDS open 27681-28451 771_na     256_aa dtd3 D-aminoacyl-tRNA deacylase
2565 JAKRKV010000006.1 GCA_022569275.1_02565 CDS open 28477-30450 1974_na     657_aa metG Methionine--tRNA ligase
2566 JAKRKV010000006.1 GCA_022569275.1_02566 CDS open 30679-31524 846_na     281_aa rsmI Ribosomal RNA small subunit methyltransferase I
2567 JAKRKV010000006.1 GCA_022569275.1_02567 CDS open 31526-31774 249_na     82_aa hypothetical protein
2568 JAKRKV010000006.1 GCA_022569275.1_02568 CDS open 31767-32492 726_na     241_aa yfiC tRNA1(Val) (adenine(37)-N6)-methyltransferase
2569 JAKRKV010000006.1 GCA_022569275.1_02569 CDS open 32585-32932 348_na     115_aa yabA Initiation-control protein YabA
2570 JAKRKV010000006.1 GCA_022569275.1_02570 CDS open 32949-33752 804_na     267_aa hypothetical protein
2571 JAKRKV010000006.1 GCA_022569275.1_02571 CDS open 33753-34679 927_na     308_aa hypothetical protein
2572 JAKRKV010000006.1 GCA_022569275.1_02572 CDS open 34976-35305 330_na     109_aa darA Cyclic di-AMP receptor A
2573 JAKRKV010000006.1 GCA_022569275.1_02573 CDS open 35333-35950 618_na     205_aa tmk Thymidylate kinase
2574 JAKRKV010000006.1 GCA_022569275.1_02574 CDS open 35954-37297 1344_na     447_aa speA Arginine decarboxylase
2575 JAKRKV010000006.1 GCA_022569275.1_02575 CDS open 37323-37850 528_na     175_aa speG Spermidine N(1)-acetyltransferase
2576 JAKRKV010000006.1 misc_RNA open 38083-38315 S35
2577 JAKRKV010000006.1 GCA_022569275.1_02577 CDS open 38395-44979 6585_na     2194_aa pqqA Coenzyme PQQ synthesis protein A
2578 JAKRKV010000006.1 GCA_022569275.1_02578 CDS open 45246-46562 1317_na     438_aa ISL3 family transposase ISSha1
2579 JAKRKV010000007.1 GCA_022569275.1_02579 CDS open 489-869 381_na     126_aa hypothetical protein
2580 JAKRKV010000007.1 GCA_022569275.1_02580 CDS open 1200-2909 1710_na     569_aa hypothetical protein
2581 JAKRKV010000007.1 GCA_022569275.1_02581 CDS open 2923-3792 870_na     289_aa hypothetical protein
2582 JAKRKV010000007.1 GCA_022569275.1_02582 CDS open 3859-4179 321_na     106_aa hypothetical protein
2583 JAKRKV010000007.1 GCA_022569275.1_02583 CDS open 4180-4563 384_na     127_aa hypothetical protein
2584 JAKRKV010000007.1 GCA_022569275.1_02584 CDS open 4565-4768 204_na     67_aa hypothetical protein
2585 JAKRKV010000007.1 GCA_022569275.1_02585 CDS open 4753-4908 156_na     51_aa hypothetical protein
2586 JAKRKV010000007.1 GCA_022569275.1_02586 CDS open 4905-5222 318_na     105_aa hypothetical protein
2587 JAKRKV010000007.1 GCA_022569275.1_02587 CDS open 5226-5444 219_na     72_aa hypothetical protein
2588 JAKRKV010000007.1 GCA_022569275.1_02588 CDS open 5614-6384 771_na     256_aa hypothetical protein
2589 JAKRKV010000007.1 GCA_022569275.1_02589 CDS open 6385-7557 1173_na     390_aa xerC_7 Tyrosine recombinase XerC
2590 JAKRKV010000007.1 GCA_022569275.1_02590 CDS open 7626-9248 1623_na     540_aa groL 60 kDa chaperonin
2591 JAKRKV010000007.1 GCA_022569275.1_02591 CDS open 9308-9592 285_na     94_aa groS 10 kDa chaperonin
2592 JAKRKV010000007.1 GCA_022569275.1_02592 CDS open 9773-10513 741_na     246_aa MroQ Membrane-embedded CAAX protease MroQ
2593 JAKRKV010000007.1 GCA_022569275.1_02593 CDS open 10942-12354 1413_na     470_aa hypothetical protein
2594 JAKRKV010000007.1 GCA_022569275.1_02594 CDS open 12548-13171 624_na     207_aa hypothetical protein
2595 JAKRKV010000007.1 GCA_022569275.1_02595 CDS open 13306-14091 786_na     261_aa yafV Omega-amidase YafV
2596 JAKRKV010000007.1 misc_RNA open 14099-14514 RNAIII
2597 JAKRKV010000007.1 GCA_022569275.1_02597 CDS open 14719-15285 567_na     188_aa agrB Accessory gene regulator protein B
2598 JAKRKV010000007.1 GCA_022569275.1_02598 CDS open 15288-15431 144_na     47_aa hypothetical protein
2599 JAKRKV010000007.1 GCA_022569275.1_02599 CDS open 15453-16742 1290_na     429_aa hypothetical protein
2600 JAKRKV010000007.1 GCA_022569275.1_02600 CDS open 16755-17471 717_na     238_aa agrA Accessory gene regulator protein A
2601 JAKRKV010000007.1 GCA_022569275.1_02601 CDS open 17563-18537 975_na     324_aa scrK Fructokinase
2602 JAKRKV010000007.1 GCA_022569275.1_02602 CDS open 18538-20022 1485_na     494_aa scrB Sucrose-6-phosphate hydrolase
2603 JAKRKV010000007.1 GCA_022569275.1_02603 CDS open 20122-21072 951_na     316_aa treR_2 HTH-type transcriptional regulator TreR
2604 JAKRKV010000007.1 GCA_022569275.1_02604 CDS open 21172-22416 1245_na     414_aa nrgA Ammonium transporter
2605 JAKRKV010000007.1 GCA_022569275.1_02605 CDS open 22611-22835 225_na     74_aa yeeD Putative sulfur carrier protein YeeD
2606 JAKRKV010000007.1 GCA_022569275.1_02606 CDS open 22852-23946 1095_na     364_aa hypothetical protein
2607 JAKRKV010000007.1 GCA_022569275.1_02607 CDS open 24366-25001 636_na     211_aa rex Redox-sensing transcriptional repressor Rex
2608 JAKRKV010000007.1 GCA_022569275.1_02608 CDS open 25267-27210 1944_na     647_aa yheS putative ABC transporter ATP-binding protein YheS
2609 JAKRKV010000007.1 GCA_022569275.1_02609 CDS open 27565-29178 1614_na     537_aa mutS_2 DNA mismatch repair protein MutS
2610 JAKRKV010000007.1 GCA_022569275.1_02610 CDS open 29503-30525 1023_na     340_aa tsaD tRNA N6-adenosine threonylcarbamoyltransferase
2611 JAKRKV010000007.1 GCA_022569275.1_02611 CDS open 30518-30982 465_na     154_aa hypothetical protein
2612 JAKRKV010000007.1 GCA_022569275.1_02612 CDS open 30955-31617 663_na     220_aa tsaB tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
2613 JAKRKV010000007.1 GCA_022569275.1_02613 CDS open 31598-32059 462_na     153_aa tsaE tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
2614 JAKRKV010000007.1 GCA_022569275.1_02614 CDS open 32237-32338 102_na     33_aa hypothetical protein
2615 JAKRKV010000007.1 misc_RNA open 32259-32465 rli60
2616 JAKRKV010000007.1 GCA_022569275.1_02616 CDS open 32527-34215 1689_na     562_aa ilvD Dihydroxy-acid dehydratase
2617 JAKRKV010000007.1 GCA_022569275.1_02617 CDS open 34231-35964 1734_na     577_aa ilvB Acetolactate synthase large subunit
2618 JAKRKV010000007.1 GCA_022569275.1_02618 CDS open 35961-36194 234_na     77_aa hypothetical protein
2619 JAKRKV010000007.1 GCA_022569275.1_02619 CDS open 36327-37331 1005_na     334_aa ilvC Ketol-acid reductoisomerase (NADP(+))
2620 JAKRKV010000007.1 GCA_022569275.1_02620 CDS open 37353-38903 1551_na     516_aa leuA 2-isopropylmalate synthase
2621 JAKRKV010000007.1 GCA_022569275.1_02621 CDS open 38893-39933 1041_na     346_aa leuB 3-isopropylmalate dehydrogenase
2622 JAKRKV010000007.1 GCA_022569275.1_02622 CDS open 39947-41317 1371_na     456_aa leuC 3-isopropylmalate dehydratase large subunit
2623 JAKRKV010000007.1 GCA_022569275.1_02623 CDS open 41320-41889 570_na     189_aa leuD 3-isopropylmalate dehydratase small subunit
2624 JAKRKV010000007.1 GCA_022569275.1_02624 CDS open 41906-43174 1269_na     422_aa ilvA L-threonine dehydratase biosynthetic IlvA
2625 JAKRKV010000007.1 GCA_022569275.1_02625 CDS open 43318-43932 615_na     204_aa eamB CysteineO-acetylserine efflux protein
2626 JAKRKV010000008.1 GCA_022569275.1_02626 CDS open 209-388 180_na     59_aa hypothetical protein
2627 JAKRKV010000008.1 GCA_022569275.1_02627 CDS open 985-1995 1011_na     336_aa hypothetical protein
2628 JAKRKV010000008.1 GCA_022569275.1_02628 CDS open 1982-2182 201_na     66_aa hypothetical protein
2629 JAKRKV010000008.1 GCA_022569275.1_02629 CDS open 2161-2547 387_na     128_aa hypothetical protein
2630 JAKRKV010000008.1 GCA_022569275.1_02630 CDS open 2810-3088 279_na     92_aa hypothetical protein
2631 JAKRKV010000008.1 GCA_022569275.1_02631 CDS open 3183-3983 801_na     266_aa tagG_2 Teichoic acid translocation permease protein TagG
2632 JAKRKV010000008.1 GCA_022569275.1_02632 CDS open 4867-5478 612_na     203_aa hypothetical protein
2633 JAKRKV010000008.1 GCA_022569275.1_02633 CDS open 5526-6383 858_na     285_aa hypothetical protein
2634 JAKRKV010000009.1 rRNA open 18-2935 23S ribosomal RNA
2635 JAKRKV010000010.1 GCA_022569275.1_02635 CDS open 19-135 117_na     38_aa hypothetical protein
2636 JAKRKV010000010.1 misc_RNA open 216-307 ctRNA_pT181
2637 JAKRKV010000010.1 GCA_022569275.1_02637 CDS open 396-1340 945_na     314_aa repE Replication initiation protein
2638 JAKRKV010000010.1 GCA_022569275.1_02638 CDS open 2054-2242 189_na     62_aa hypothetical protein
2639 JAKRKV010000011.1 GCA_022569275.1_02639 CDS open 438-782 345_na     114_aa hypothetical protein
2640 JAKRKV010000011.1 GCA_022569275.1_02640 CDS open 796-1029 234_na     77_aa hypothetical protein
2641 JAKRKV010000011.1 GCA_022569275.1_02641 CDS open 1041-1562 522_na     173_aa hypothetical protein
2642 JAKRKV010000012.1 GCA_022569275.1_02642 CDS open 467-1465 999_na     332_aa hypothetical protein
2643 JAKRKV010000013.1 rRNA open 78-1624 16S ribosomal RNA
2644 JAKRKV010000014.1 tRNA open 15-91 tRNA-Ile(gat)
2645 JAKRKV010000014.1 tRNA open 101-176 tRNA-Ala(tgc)
2646 JAKRKV010000016.1 tRNA open 45-126 tRNA-Leu(tag)
2647 JAKRKV010000016.1 tRNA open 134-209 tRNA-Lys(ttt)
2648 JAKRKV010000016.1 tRNA open 223-298 tRNA-Thr(tgt)
2649 JAKRKV010000016.1 tRNA open 307-382 tRNA-Val(tac)
2650 JAKRKV010000017.1 tRNA open 9-83 tRNA-Arg(acg)
2651 JAKRKV010000017.1 tRNA open 106-180 tRNA-Pro(tgg)
2652 JAKRKV010000017.1 tRNA open 194-269 tRNA-Ala(tgc)