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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_022689235.1)

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PROKKA Annotations for GCA_022689235.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
24 2620375 2463 5 1 46
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Annotation Table [page:6]    |    Number of Records Found: 2604 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JALCXS010000008.1 GCA_022689235.1_02501 CDS open 75334-76344 1011_na     336_aa adh_2 Alcohol dehydrogenase
2502 JALCXS010000008.1 GCA_022689235.1_02502 CDS open 76907-77413 507_na     168_aa hypothetical protein
2503 JALCXS010000008.1 GCA_022689235.1_02503 CDS open 77512-78810 1299_na     432_aa hypothetical protein
2504 JALCXS010000008.1 GCA_022689235.1_02504 CDS open 78876-79355 480_na     159_aa hypothetical protein
2505 JALCXS010000008.1 GCA_022689235.1_02505 CDS open 79541-80086 546_na     181_aa ywqN Putative NAD(P)H-dependent FMN-containing oxidoreductase YwqN
2506 JALCXS010000008.1 GCA_022689235.1_02506 CDS open 80272-81210 939_na     312_aa iolS Aldo-keto reductase IolS
2507 JALCXS010000008.1 GCA_022689235.1_02507 CDS open 81365-81787 423_na     140_aa hypothetical protein
2508 JALCXS010000008.1 GCA_022689235.1_02508 CDS open 81792-83114 1323_na     440_aa rclA putative pyridine nucleotide-disulfide oxidoreductase RclA
2509 JALCXS010000008.1 GCA_022689235.1_02509 CDS open 83303-83407 105_na     34_aa hypothetical protein
2510 JALCXS010000008.1 GCA_022689235.1_02510 CDS open 83448-84299 852_na     283_aa yidA Sugar phosphatase YidA
2511 JALCXS010000008.1 GCA_022689235.1_02511 CDS open 84567-86372 1806_na     601_aa glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
2512 JALCXS010000008.1 misc_RNA open 86570-86785 glmS
2513 JALCXS010000008.1 GCA_022689235.1_02513 CDS open 87111-88466 1356_na     451_aa glmM Phosphoglucosamine mutase
2514 JALCXS010000008.1 GCA_022689235.1_02514 CDS open 88490-89422 933_na     310_aa cdaR CdaA regulatory protein CdaR
2515 JALCXS010000008.1 GCA_022689235.1_02515 CDS open 89424-90230 807_na     268_aa cdaA Cyclic di-AMP synthase CdaA
2516 JALCXS010000008.1 tRNA open 90367-90439 tRNA-Lys(ttt)
2517 JALCXS010000008.1 tRNA open 90443-90517 tRNA-Gln(ttg)
2518 JALCXS010000009.1 tRNA open 113-184 tRNA-Gly(tcc)
2519 JALCXS010000009.1 tRNA open 201-286 tRNA-Leu(gag)
2520 JALCXS010000009.1 GCA_022689235.1_02520 CDS open 594-1052 459_na     152_aa Protein SprT-like protein
2521 JALCXS010000009.1 GCA_022689235.1_02521 CDS open 1045-3195 2151_na     716_aa yhgF Protein YhgF
2522 JALCXS010000009.1 GCA_022689235.1_02522 CDS open 3314-4084 771_na     256_aa sigB RNA polymerase sigma-B factor
2523 JALCXS010000009.1 GCA_022689235.1_02523 CDS open 4059-4538 480_na     159_aa rsbW Serine-protein kinase RsbW
2524 JALCXS010000009.1 GCA_022689235.1_02524 CDS open 4540-4866 327_na     108_aa rsbV Anti-sigma-B factor antagonist
2525 JALCXS010000009.1 GCA_022689235.1_02525 CDS open 4957-5958 1002_na     333_aa rsbU Phosphoserine phosphatase RsbU
2526 JALCXS010000009.1 GCA_022689235.1_02526 CDS open 6392-6742 351_na     116_aa mazF Endoribonuclease MazF
2527 JALCXS010000009.1 GCA_022689235.1_02527 CDS open 6739-6909 171_na     56_aa mazE Antitoxin MazE
2528 JALCXS010000009.1 GCA_022689235.1_02528 CDS open 6996-8144 1149_na     382_aa alr1 Alanine racemase 1
2529 JALCXS010000009.1 GCA_022689235.1_02529 CDS open 8192-8584 393_na     130_aa acpS Holo-[acyl-carrier-protein] synthase
2530 JALCXS010000009.1 GCA_022689235.1_02530 CDS open 8596-9108 513_na     170_aa hypothetical protein
2531 JALCXS010000009.1 GCA_022689235.1_02531 CDS open 9095-10609 1515_na     504_aa hypothetical protein
2532 JALCXS010000009.1 GCA_022689235.1_02532 CDS open 10602-11084 483_na     160_aa hypothetical protein
2533 JALCXS010000009.1 GCA_022689235.1_02533 CDS open 11409-12923 1515_na     504_aa cshA DEAD-box ATP-dependent RNA helicase CshA
2534 JALCXS010000009.1 GCA_022689235.1_02534 CDS open 13158-14516 1359_na     452_aa murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
2535 JALCXS010000009.1 GCA_022689235.1_02535 CDS open 14534-15604 1071_na     356_aa ddl D-alanine--D-alanine ligase
2536 JALCXS010000009.1 GCA_022689235.1_02536 CDS open 15960-17150 1191_na     396_aa rodA Peptidoglycan glycosyltransferase RodA
2537 JALCXS010000009.1 GCA_022689235.1_02537 CDS open 17564-17701 138_na     45_aa hypothetical protein
2538 JALCXS010000009.1 GCA_022689235.1_02538 CDS open 17792-18004 213_na     70_aa hypothetical protein
2539 JALCXS010000009.1 GCA_022689235.1_02539 CDS open 18017-18319 303_na     100_aa csoR_2 Copper-sensing transcriptional repressor CsoR
2540 JALCXS010000009.1 GCA_022689235.1_02540 CDS open 18476-19960 1485_na     494_aa cls_2 Cardiolipin synthase
2541 JALCXS010000009.1 GCA_022689235.1_02541 CDS open 20082-20723 642_na     213_aa yedJ putative protein YedJ
2542 JALCXS010000009.1 GCA_022689235.1_02542 CDS open 21107-21982 876_na     291_aa yidC_3 Membrane protein insertase YidC
2543 JALCXS010000009.1 GCA_022689235.1_02543 CDS open 22072-22710 639_na     212_aa thiE Thiamine-phosphate synthase
2544 JALCXS010000009.1 GCA_022689235.1_02544 CDS open 22713-23501 789_na     262_aa thiM Hydroxyethylthiazole kinase
2545 JALCXS010000009.1 GCA_022689235.1_02545 CDS open 23494-24315 822_na     273_aa thiD Hydroxymethylpyrimidinephosphomethylpyrimidine kinase
2546 JALCXS010000009.1 GCA_022689235.1_02546 CDS open 24320-24997 678_na     225_aa tenA Aminopyrimidine aminohydrolase
2547 JALCXS010000009.1 misc_RNA open 25084-25187 TPP
2548 JALCXS010000009.1 GCA_022689235.1_02548 CDS open 25410-26117 708_na     235_aa sceD putative transglycosylase SceD
2549 JALCXS010000009.1 GCA_022689235.1_02549 CDS open 26596-26997 402_na     133_aa Single-stranded DNA-binding protein
2550 JALCXS010000009.1 GCA_022689235.1_02550 CDS open 27186-27638 453_na     150_aa hypothetical protein
2551 JALCXS010000009.1 GCA_022689235.1_02551 CDS open 28035-28475 441_na     146_aa fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
2552 JALCXS010000009.1 GCA_022689235.1_02552 CDS open 28512-29777 1266_na     421_aa murA1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
2553 JALCXS010000009.1 GCA_022689235.1_02553 CDS open 29941-30174 234_na     77_aa hypothetical protein
2554 JALCXS010000009.1 GCA_022689235.1_02554 CDS open 30312-30713 402_na     133_aa atpC ATP synthase epsilon chain
2555 JALCXS010000009.1 GCA_022689235.1_02555 CDS open 30735-32147 1413_na     470_aa atpD ATP synthase subunit beta
2556 JALCXS010000009.1 GCA_022689235.1_02556 CDS open 32169-33035 867_na     288_aa atpG ATP synthase gamma chain
2557 JALCXS010000009.1 GCA_022689235.1_02557 CDS open 33067-34575 1509_na     502_aa atpA ATP synthase subunit alpha
2558 JALCXS010000009.1 GCA_022689235.1_02558 CDS open 34595-35134 540_na     179_aa atpH ATP synthase subunit delta
2559 JALCXS010000009.1 GCA_022689235.1_02559 CDS open 35134-35658 525_na     174_aa atpF ATP synthase subunit b
2560 JALCXS010000009.1 GCA_022689235.1_02560 CDS open 35750-35962 213_na     70_aa atpE ATP synthase subunit c
2561 JALCXS010000009.1 GCA_022689235.1_02561 CDS open 35994-36722 729_na     242_aa atpB ATP synthase subunit a
2562 JALCXS010000009.1 GCA_022689235.1_02562 CDS open 36749-37099 351_na     116_aa hypothetical protein
2563 JALCXS010000009.1 GCA_022689235.1_02563 CDS open 37380-38009 630_na     209_aa upp Uracil phosphoribosyltransferase
2564 JALCXS010000009.1 GCA_022689235.1_02564 CDS open 38031-39269 1239_na     412_aa glyA Serine hydroxymethyltransferase
2565 JALCXS010000009.1 GCA_022689235.1_02565 CDS open 39292-39816 525_na     174_aa hypothetical protein
2566 JALCXS010000009.1 GCA_022689235.1_02566 CDS open 39925-40347 423_na     140_aa ptpB Low molecular weight protein-tyrosine-phosphatase PtpB
2567 JALCXS010000009.1 GCA_022689235.1_02567 CDS open 40353-41387 1035_na     344_aa ywlC Threonylcarbamoyl-AMP synthase
2568 JALCXS010000009.1 GCA_022689235.1_02568 CDS open 41475-42314 840_na     279_aa prmC Release factor glutamine methyltransferase
2569 JALCXS010000009.1 GCA_022689235.1_02569 CDS open 42301-43377 1077_na     358_aa prfA Peptide chain release factor 1
2570 JALCXS010000009.1 GCA_022689235.1_02570 CDS open 43377-43976 600_na     199_aa tdk Thymidine kinase
2571 JALCXS010000009.1 GCA_022689235.1_02571 CDS open 44176-44433 258_na     85_aa rpmE2 50S ribosomal protein L31 type B
2572 JALCXS010000009.1 GCA_022689235.1_02572 CDS open 44550-45866 1317_na     438_aa rho Transcription termination factor Rho
2573 JALCXS010000009.1 GCA_022689235.1_02573 CDS open 46056-47483 1428_na     475_aa Putative aldehyde dehydrogenase
2574 JALCXS010000009.1 GCA_022689235.1_02574 CDS open 47732-48064 333_na     110_aa yodB HTH-type transcriptional regulator YodB
2575 JALCXS010000009.1 GCA_022689235.1_02575 CDS open 48196-49464 1269_na     422_aa murA2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2
2576 JALCXS010000009.1 GCA_022689235.1_02576 CDS open 49732-50589 858_na     285_aa fba Fructose-bisphosphate aldolase
2577 JALCXS010000009.1 GCA_022689235.1_02577 CDS open 50794-51315 522_na     173_aa hypothetical protein
2578 JALCXS010000009.1 GCA_022689235.1_02578 CDS open 51363-52970 1608_na     535_aa pyrG CTP synthase
2579 JALCXS010000009.1 misc_RNA open 53132-53201 tsr31
2580 JALCXS010000009.1 GCA_022689235.1_02580 CDS open 53293-53814 522_na     173_aa rpoE putative DNA-directed RNA polymerase subunit delta
2581 JALCXS010000009.1 GCA_022689235.1_02581 CDS open 53925-54785 861_na     286_aa hypothetical protein
2582 JALCXS010000009.1 GCA_022689235.1_02582 CDS open 54943-55743 801_na     266_aa coaW Type II pantothenate kinase
2583 JALCXS010000009.1 GCA_022689235.1_02583 CDS open 55791-56456 666_na     221_aa hypothetical protein
2584 JALCXS010000009.1 GCA_022689235.1_02584 CDS open 56718-57908 1191_na     396_aa hypothetical protein
2585 JALCXS010000009.1 GCA_022689235.1_02585 CDS open 57908-59092 1185_na     394_aa N-acetyldiaminopimelate deacetylase
2586 JALCXS010000009.1 GCA_022689235.1_02586 CDS open 59347-59817 471_na     156_aa luxS S-ribosylhomocysteine lyase
2587 JALCXS010000009.1 GCA_022689235.1_02587 CDS open 60222-60383 162_na     53_aa hypothetical protein
2588 JALCXS010000009.1 GCA_022689235.1_02588 CDS open 60395-62389 1995_na     664_aa feoB Fe(2+) transporter FeoB
2589 JALCXS010000009.1 GCA_022689235.1_02589 CDS open 62399-62623 225_na     74_aa hypothetical protein
2590 JALCXS010000009.1 GCA_022689235.1_02590 CDS open 63223-63573 351_na     116_aa hypothetical protein
2591 JALCXS010000009.1 GCA_022689235.1_02591 CDS open 63573-64760 1188_na     395_aa deoB Phosphopentomutase
2592 JALCXS010000009.1 GCA_022689235.1_02592 CDS open 64771-66072 1302_na     433_aa pdp Pyrimidine-nucleoside phosphorylase
2593 JALCXS010000009.1 GCA_022689235.1_02593 CDS open 66133-66792 660_na     219_aa deoC1 Deoxyribose-phosphate aldolase 1
2594 JALCXS010000009.1 GCA_022689235.1_02594 CDS open 66971-67681 711_na     236_aa deoD Purine nucleoside phosphorylase DeoD-type
2595 JALCXS010000009.1 GCA_022689235.1_02595 CDS open 67759-68205 447_na     148_aa dps General stress protein 20U
2596 JALCXS010000009.1 GCA_022689235.1_02596 CDS open 68406-68816 411_na     136_aa hypothetical protein
2597 JALCXS010000009.1 GCA_022689235.1_02597 CDS open 69067-70443 1377_na     458_aa hypothetical protein
2598 JALCXS010000009.1 GCA_022689235.1_02598 CDS open 70693-70926 234_na     77_aa hypothetical protein
2599 JALCXS010000009.1 GCA_022689235.1_02599 CDS open 70966-71904 939_na     312_aa gmuF putative mannose-6-phosphate isomerase GmuF
2600 JALCXS010000009.1 GCA_022689235.1_02600 CDS open 72190-72849 660_na     219_aa yhfK putative sugar epimerase YhfK
2601 JALCXS010000009.1 GCA_022689235.1_02601 CDS open 73004-73327 324_na     107_aa czrA HTH-type transcriptional repressor CzrA
2602 JALCXS010000009.1 GCA_022689235.1_02602 CDS open 73320-74288 969_na     322_aa czcD_3 Cadmium%2C cobalt and zincH(+)-K(+) antiporter
2603 JALCXS010000009.1 GCA_022689235.1_02603 CDS open 74342-75073 732_na     243_aa hypothetical protein
2604 JALCXS010000009.1 GCA_022689235.1_02604 CDS open 75206-76279 1074_na     357_aa hypothetical protein