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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_022689305.1)

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PROKKA Annotations for GCA_022689305.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
32 2577616 2428 5 1 48
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Annotation Table [page:6]    |    Number of Records Found: 2567 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JALCXP010000009.1 GCA_022689305.1_02501 CDS open 29167-29667 501_na     166_aa traP Signal transduction protein TRAP
2502 JALCXP010000009.1 GCA_022689305.1_02502 CDS open 29875-30909 1035_na     344_aa hemE Uroporphyrinogen decarboxylase
2503 JALCXP010000009.1 GCA_022689305.1_02503 CDS open 30964-31860 897_na     298_aa hemH Ferrochelatase
2504 JALCXP010000009.1 GCA_022689305.1_02504 CDS open 31879-33276 1398_na     465_aa hemY Protoporphyrinogen oxidase
2505 JALCXP010000009.1 GCA_022689305.1_02505 CDS open 33369-33923 555_na     184_aa ydeN Putative hydrolase YdeN
2506 JALCXP010000009.1 misc_RNA open 34185-34291 S774
2507 JALCXP010000009.1 tRNA open 34272-34345 tRNA-Met(cat)
2508 JALCXP010000009.1 tRNA open 34362-34437 tRNA-Asp(gtc)
2509 JALCXP010000009.1 tRNA open 34451-34525 tRNA-Phe(gaa)
2510 JALCXP010000009.1 tRNA open 34539-34614 tRNA-His(gtg)
2511 JALCXP010000009.1 tRNA open 34630-34703 tRNA-Gly(tcc)
2512 JALCXP010000009.1 tRNA open 34713-34787 tRNA-Asn(gtt)
2513 JALCXP010000009.1 tRNA open 34788-34861 tRNA-Glu(ttc)
2514 JALCXP010000009.1 tRNA open 34917-35006 tRNA-Ser(gga)
2515 JALCXP010000009.1 GCA_022689305.1_02515 CDS open 35119-35628 510_na     169_aa hypothetical protein
2516 JALCXP010000009.1 GCA_022689305.1_02516 CDS open 35873-37267 1395_na     464_aa menE 2-succinylbenzoate--CoA ligase
2517 JALCXP010000009.1 GCA_022689305.1_02517 CDS open 37274-38278 1005_na     334_aa menC o-succinylbenzoate synthase
2518 JALCXP010000009.1 GCA_022689305.1_02518 CDS open 38275-38532 258_na     85_aa yidD Putative membrane protein insertion efficiency factor
2519 JALCXP010000009.1 GCA_022689305.1_02519 CDS open 38599-39072 474_na     157_aa ytkD Putative 8-oxo-dGTP diphosphatase YtkD
2520 JALCXP010000009.1 GCA_022689305.1_02520 CDS open 39053-39826 774_na     257_aa hypothetical protein
2521 JALCXP010000009.1 GCA_022689305.1_02521 CDS open 39890-41482 1593_na     530_aa pckA Phosphoenolpyruvate carboxykinase (ATP)
2522 JALCXP010000009.1 misc_RNA open 41643-41751 SAM
2523 JALCXP010000009.1 GCA_022689305.1_02523 CDS open 41854-43050 1197_na     398_aa metK S-adenosylmethionine synthase
2524 JALCXP010000009.1 GCA_022689305.1_02524 CDS open 43149-44057 909_na     302_aa hypothetical protein
2525 JALCXP010000009.1 GCA_022689305.1_02525 CDS open 44172-45005 834_na     277_aa yvgN Glyoxal reductase
2526 JALCXP010000009.1 GCA_022689305.1_02526 CDS open 45190-45543 354_na     117_aa crcB_1 Putative fluoride ion transporter CrcB
2527 JALCXP010000009.1 GCA_022689305.1_02527 CDS open 45540-45905 366_na     121_aa crcB_2 Putative fluoride ion transporter CrcB
2528 JALCXP010000009.1 GCA_022689305.1_02528 CDS open 45974-46279 306_na     101_aa hypothetical protein
2529 JALCXP010000009.1 GCA_022689305.1_02529 CDS open 46536-47249 714_na     237_aa tal Transaldolase
2530 JALCXP010000009.1 GCA_022689305.1_02530 CDS open 47380-47832 453_na     150_aa hypothetical protein
2531 JALCXP010000009.1 GCA_022689305.1_02531 CDS open 47813-48259 447_na     148_aa hypothetical protein
2532 JALCXP010000009.1 GCA_022689305.1_02532 CDS open 48275-48745 471_na     156_aa sigS RNA polymerase sigma factor SigS
2533 JALCXP010000009.1 GCA_022689305.1_02533 CDS open 48943-49167 225_na     74_aa hypothetical protein
2534 JALCXP010000009.1 GCA_022689305.1_02534 CDS open 49369-50223 855_na     284_aa hypothetical protein
2535 JALCXP010000009.1 GCA_022689305.1_02535 CDS open 50607-52106 1500_na     499_aa hypothetical protein
2536 JALCXP010000009.1 misc_RNA open 52213-52342 FMN
2537 JALCXP010000009.1 GCA_022689305.1_02537 CDS open 52480-53523 1044_na     347_aa ribD Riboflavin biosynthesis protein RibD
2538 JALCXP010000009.1 GCA_022689305.1_02538 CDS open 53531-54163 633_na     210_aa ribE Riboflavin synthase
2539 JALCXP010000009.1 GCA_022689305.1_02539 CDS open 54176-55357 1182_na     393_aa ribBA Riboflavin biosynthesis protein RibBA
2540 JALCXP010000009.1 GCA_022689305.1_02540 CDS open 55370-55828 459_na     152_aa ribH 6%2C7-dimethyl-8-ribityllumazine synthase
2541 JALCXP010000009.1 GCA_022689305.1_02541 CDS open 55906-56892 987_na     328_aa fadM Proline dehydrogenase 1
2542 JALCXP010000009.1 GCA_022689305.1_02542 CDS open 57109-57942 834_na     277_aa ytpA Phospholipase YtpA
2543 JALCXP010000009.1 GCA_022689305.1_02543 CDS open 58437-58838 402_na     133_aa rot HTH-type transcriptional regulator rot
2544 JALCXP010000009.1 GCA_022689305.1_02544 CDS open 58889-59452 564_na     187_aa rsmH_2 Ribosomal RNA small subunit methyltransferase H
2545 JALCXP010000009.1 GCA_022689305.1_02545 CDS open 59449-60402 954_na     317_aa hypothetical protein
2546 JALCXP010000009.1 GCA_022689305.1_02546 CDS open 60506-61681 1176_na     391_aa mdtH Multidrug resistance protein MdtH
2547 JALCXP010000009.1 misc_RNA open 61767-61951 T-box
2548 JALCXP010000009.1 GCA_022689305.1_02548 CDS open 62003-64417 2415_na     804_aa leuS Leucine--tRNA ligase
2549 JALCXP010000009.1 GCA_022689305.1_02549 CDS open 64436-64747 312_na     103_aa Sulfurtransferase
2550 JALCXP010000009.1 GCA_022689305.1_02550 CDS open 64867-66126 1260_na     419_aa putative protein
2551 JALCXP010000009.1 GCA_022689305.1_02551 CDS open 66685-68331 1647_na     548_aa murJ Lipid II flippase MurJ
2552 JALCXP010000009.1 GCA_022689305.1_02552 CDS open 68328-69020 693_na     230_aa rsuA Ribosomal small subunit pseudouridine synthase A
2553 JALCXP010000009.1 GCA_022689305.1_02553 CDS open 69045-69449 405_na     134_aa hypothetical protein
2554 JALCXP010000009.1 GCA_022689305.1_02554 CDS open 69676-71085 1410_na     469_aa Putative dipeptidase
2555 JALCXP010000009.1 GCA_022689305.1_02555 CDS open 71088-71933 846_na     281_aa dat D-alanine aminotransferase
2556 JALCXP010000009.1 GCA_022689305.1_02556 CDS open 72291-73085 795_na     264_aa hypothetical protein
2557 JALCXP010000009.1 GCA_022689305.1_02557 CDS open 73154-73798 645_na     214_aa trmB tRNA (guanine-N(7)-)-methyltransferase
2558 JALCXP010000009.1 misc_RNA open 73844-74108 S35
2559 JALCXP010000009.1 GCA_022689305.1_02559 CDS open 74169-74990 822_na     273_aa ytnP putative quorum-quenching lactonase YtnP
2560 JALCXP010000009.1 GCA_022689305.1_02560 CDS open 75048-75368 321_na     106_aa hypothetical protein
2561 JALCXP010000009.1 GCA_022689305.1_02561 CDS open 75456-76535 1080_na     359_aa pepA_2 Glutamyl aminopeptidase
2562 JALCXP010000009.1 GCA_022689305.1_02562 CDS open 76550-76861 312_na     103_aa ytpP Thioredoxin-like protein YtpP
2563 JALCXP010000009.1 GCA_022689305.1_02563 CDS open 76956-77816 861_na     286_aa hypothetical protein
2564 JALCXP010000009.1 GCA_022689305.1_02564 CDS open 77839-78438 600_na     199_aa hypothetical protein
2565 JALCXP010000009.1 GCA_022689305.1_02565 CDS open 78460-81807 3348_na     1115_aa hypothetical protein
2566 JALCXP010000009.1 GCA_022689305.1_02566 CDS open 81831-83144 1314_na     437_aa murC UDP-N-acetylmuramate--L-alanine ligase
2567 JALCXP010000009.1 GCA_022689305.1_02567 CDS open 83218-83688 471_na     156_aa hypothetical protein