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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_022689325.1)

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PROKKA Annotations for GCA_022689325.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
23 2621768 2464 5 1 47
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Annotation Table [page:6]    |    Number of Records Found: 2606 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JALCXM010000008.1 GCA_022689325.1_02501 CDS open 37905-39221 1317_na     438_aa rho Transcription termination factor Rho
2502 JALCXM010000008.1 GCA_022689325.1_02502 CDS open 39338-39595 258_na     85_aa rpmE2 50S ribosomal protein L31 type B
2503 JALCXM010000008.1 GCA_022689325.1_02503 CDS open 39795-40394 600_na     199_aa tdk Thymidine kinase
2504 JALCXM010000008.1 GCA_022689325.1_02504 CDS open 40394-41470 1077_na     358_aa prfA Peptide chain release factor 1
2505 JALCXM010000008.1 GCA_022689325.1_02505 CDS open 41457-42296 840_na     279_aa prmC Release factor glutamine methyltransferase
2506 JALCXM010000008.1 GCA_022689325.1_02506 CDS open 42384-43418 1035_na     344_aa ywlC Threonylcarbamoyl-AMP synthase
2507 JALCXM010000008.1 GCA_022689325.1_02507 CDS open 43424-43846 423_na     140_aa ptpB Low molecular weight protein-tyrosine-phosphatase PtpB
2508 JALCXM010000008.1 GCA_022689325.1_02508 CDS open 43955-44479 525_na     174_aa hypothetical protein
2509 JALCXM010000008.1 GCA_022689325.1_02509 CDS open 44502-45740 1239_na     412_aa glyA Serine hydroxymethyltransferase
2510 JALCXM010000008.1 GCA_022689325.1_02510 CDS open 45762-46391 630_na     209_aa upp Uracil phosphoribosyltransferase
2511 JALCXM010000008.1 GCA_022689325.1_02511 CDS open 46672-47022 351_na     116_aa hypothetical protein
2512 JALCXM010000008.1 GCA_022689325.1_02512 CDS open 47049-47777 729_na     242_aa atpB ATP synthase subunit a
2513 JALCXM010000008.1 GCA_022689325.1_02513 CDS open 47809-48021 213_na     70_aa atpE ATP synthase subunit c
2514 JALCXM010000008.1 GCA_022689325.1_02514 CDS open 48113-48637 525_na     174_aa atpF ATP synthase subunit b
2515 JALCXM010000008.1 GCA_022689325.1_02515 CDS open 48637-49176 540_na     179_aa atpH ATP synthase subunit delta
2516 JALCXM010000008.1 GCA_022689325.1_02516 CDS open 49196-50704 1509_na     502_aa atpA ATP synthase subunit alpha
2517 JALCXM010000008.1 GCA_022689325.1_02517 CDS open 50736-51602 867_na     288_aa atpG ATP synthase gamma chain
2518 JALCXM010000008.1 GCA_022689325.1_02518 CDS open 51624-53036 1413_na     470_aa atpD ATP synthase subunit beta
2519 JALCXM010000008.1 GCA_022689325.1_02519 CDS open 53058-53459 402_na     133_aa atpC ATP synthase epsilon chain
2520 JALCXM010000008.1 GCA_022689325.1_02520 CDS open 53597-53830 234_na     77_aa hypothetical protein
2521 JALCXM010000008.1 GCA_022689325.1_02521 CDS open 53994-55259 1266_na     421_aa murA1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
2522 JALCXM010000008.1 GCA_022689325.1_02522 CDS open 55296-55736 441_na     146_aa fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
2523 JALCXM010000008.1 GCA_022689325.1_02523 CDS open 56133-56585 453_na     150_aa hypothetical protein
2524 JALCXM010000008.1 GCA_022689325.1_02524 CDS open 56774-57175 402_na     133_aa Single-stranded DNA-binding protein
2525 JALCXM010000008.1 GCA_022689325.1_02525 CDS open 57654-58361 708_na     235_aa sceD putative transglycosylase SceD
2526 JALCXM010000008.1 misc_RNA open 58584-58687 TPP
2527 JALCXM010000008.1 GCA_022689325.1_02527 CDS open 58774-59451 678_na     225_aa tenA Aminopyrimidine aminohydrolase
2528 JALCXM010000008.1 GCA_022689325.1_02528 CDS open 59456-60277 822_na     273_aa thiD Hydroxymethylpyrimidinephosphomethylpyrimidine kinase
2529 JALCXM010000008.1 GCA_022689325.1_02529 CDS open 60270-61058 789_na     262_aa thiM Hydroxyethylthiazole kinase
2530 JALCXM010000008.1 GCA_022689325.1_02530 CDS open 61061-61699 639_na     212_aa thiE Thiamine-phosphate synthase
2531 JALCXM010000008.1 GCA_022689325.1_02531 CDS open 61789-62664 876_na     291_aa yidC_3 Membrane protein insertase YidC
2532 JALCXM010000008.1 GCA_022689325.1_02532 CDS open 63048-63689 642_na     213_aa yedJ putative protein YedJ
2533 JALCXM010000008.1 GCA_022689325.1_02533 CDS open 63811-65295 1485_na     494_aa cls_2 Cardiolipin synthase
2534 JALCXM010000008.1 GCA_022689325.1_02534 CDS open 65452-65754 303_na     100_aa csoR_2 Copper-sensing transcriptional repressor CsoR
2535 JALCXM010000008.1 GCA_022689325.1_02535 CDS open 65767-65979 213_na     70_aa hypothetical protein
2536 JALCXM010000008.1 GCA_022689325.1_02536 CDS open 66070-66207 138_na     45_aa hypothetical protein
2537 JALCXM010000008.1 GCA_022689325.1_02537 CDS open 66621-67811 1191_na     396_aa rodA Peptidoglycan glycosyltransferase RodA
2538 JALCXM010000008.1 GCA_022689325.1_02538 CDS open 68167-69237 1071_na     356_aa ddl D-alanine--D-alanine ligase
2539 JALCXM010000008.1 GCA_022689325.1_02539 CDS open 69255-70613 1359_na     452_aa murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
2540 JALCXM010000008.1 GCA_022689325.1_02540 CDS open 70848-72362 1515_na     504_aa cshA DEAD-box ATP-dependent RNA helicase CshA
2541 JALCXM010000008.1 GCA_022689325.1_02541 CDS open 72687-73169 483_na     160_aa hypothetical protein
2542 JALCXM010000008.1 GCA_022689325.1_02542 CDS open 73162-74676 1515_na     504_aa hypothetical protein
2543 JALCXM010000008.1 GCA_022689325.1_02543 CDS open 74663-75175 513_na     170_aa hypothetical protein
2544 JALCXM010000008.1 GCA_022689325.1_02544 CDS open 75187-75579 393_na     130_aa acpS Holo-[acyl-carrier-protein] synthase
2545 JALCXM010000008.1 GCA_022689325.1_02545 CDS open 75627-76775 1149_na     382_aa alr1 Alanine racemase 1
2546 JALCXM010000008.1 GCA_022689325.1_02546 CDS open 76862-77032 171_na     56_aa mazE Antitoxin MazE
2547 JALCXM010000008.1 GCA_022689325.1_02547 CDS open 77029-77379 351_na     116_aa mazF Endoribonuclease MazF
2548 JALCXM010000008.1 GCA_022689325.1_02548 CDS open 77813-78814 1002_na     333_aa rsbU Phosphoserine phosphatase RsbU
2549 JALCXM010000008.1 GCA_022689325.1_02549 CDS open 78905-79231 327_na     108_aa rsbV Anti-sigma-B factor antagonist
2550 JALCXM010000008.1 GCA_022689325.1_02550 CDS open 79233-79712 480_na     159_aa rsbW Serine-protein kinase RsbW
2551 JALCXM010000008.1 GCA_022689325.1_02551 CDS open 79687-80457 771_na     256_aa sigB RNA polymerase sigma-B factor
2552 JALCXM010000008.1 GCA_022689325.1_02552 CDS open 80576-82726 2151_na     716_aa yhgF Protein YhgF
2553 JALCXM010000008.1 GCA_022689325.1_02553 CDS open 82719-83177 459_na     152_aa Protein SprT-like protein
2554 JALCXM010000008.1 tRNA open 83485-83570 tRNA-Leu(gag)
2555 JALCXM010000008.1 tRNA open 83587-83658 tRNA-Gly(tcc)
2556 JALCXM010000009.1 GCA_022689325.1_02556 CDS open 2650-2976 327_na     108_aa hypothetical protein
2557 JALCXM010000009.1 GCA_022689325.1_02557 CDS open 3399-3965 567_na     188_aa azo1 FMN-dependent NADPH-azoreductase
2558 JALCXM010000009.1 GCA_022689325.1_02558 CDS open 3981-4850 870_na     289_aa ywpJ Phosphatase YwpJ
2559 JALCXM010000009.1 GCA_022689325.1_02559 CDS open 4974-5450 477_na     158_aa tadA_2 tRNA-specific adenosine deaminase
2560 JALCXM010000009.1 GCA_022689325.1_02560 CDS open 5514-6131 618_na     205_aa dgk Deoxyguanosine kinase
2561 JALCXM010000009.1 GCA_022689325.1_02561 CDS open 6124-6798 675_na     224_aa dck Deoxyadenosinedeoxycytidine kinase
2562 JALCXM010000009.1 GCA_022689325.1_02562 CDS open 6987-7679 693_na     230_aa gph Phosphoglycolate phosphatase
2563 JALCXM010000009.1 GCA_022689325.1_02563 CDS open 8279-9397 1119_na     372_aa ald1 Alanine dehydrogenase 1
2564 JALCXM010000009.1 GCA_022689325.1_02564 CDS open 9493-10533 1041_na     346_aa tdcB L-threonine dehydratase catabolic TdcB
2565 JALCXM010000009.1 GCA_022689325.1_02565 CDS open 10562-11881 1320_na     439_aa steT Serinethreonine exchanger SteT
2566 JALCXM010000009.1 GCA_022689325.1_02566 CDS open 12691-13767 1077_na     358_aa ilvE putative branched-chain-amino-acid aminotransferase
2567 JALCXM010000009.1 GCA_022689325.1_02567 CDS open 13988-14941 954_na     317_aa putative epimerasedehydratase
2568 JALCXM010000009.1 GCA_022689325.1_02568 CDS open 15641-15973 333_na     110_aa argO Arginine exporter protein ArgO
2569 JALCXM010000009.1 GCA_022689325.1_02569 CDS open 16014-16265 252_na     83_aa hypothetical protein
2570 JALCXM010000009.1 GCA_022689325.1_02570 CDS open 16315-16734 420_na     139_aa nudG CTP pyrophosphohydrolase
2571 JALCXM010000009.1 GCA_022689325.1_02571 CDS open 16745-17251 507_na     168_aa hypothetical protein
2572 JALCXM010000009.1 GCA_022689325.1_02572 CDS open 17370-18332 963_na     320_aa arcB Delta(1)-pyrroline-2-carboxylate reductase
2573 JALCXM010000009.1 GCA_022689325.1_02573 CDS open 18435-19625 1191_na     396_aa Putative pyridoxal phosphate-dependent acyltransferase
2574 JALCXM010000009.1 GCA_022689325.1_02574 CDS open 20195-21361 1167_na     388_aa scmP_4 N-acetylcysteine deacetylase
2575 JALCXM010000009.1 GCA_022689325.1_02575 CDS open 21476-22660 1185_na     394_aa tuf Elongation factor Tu
2576 JALCXM010000009.1 GCA_022689325.1_02576 CDS open 22879-24960 2082_na     693_aa fusA Elongation factor G
2577 JALCXM010000009.1 GCA_022689325.1_02577 CDS open 25080-25550 471_na     156_aa rpsG 30S ribosomal protein S7
2578 JALCXM010000009.1 GCA_022689325.1_02578 CDS open 25621-26034 414_na     137_aa rpsL 30S ribosomal protein S12
2579 JALCXM010000009.1 GCA_022689325.1_02579 CDS open 26124-26384 261_na     86_aa rplGB Ribosome-associated protein L7Ae-like protein
2580 JALCXM010000009.1 GCA_022689325.1_02580 CDS open 26646-30269 3624_na     1207_aa rpoC DNA-directed RNA polymerase subunit beta
2581 JALCXM010000009.1 GCA_022689325.1_02581 CDS open 30428-33982 3555_na     1184_aa rpoB DNA-directed RNA polymerase subunit beta
2582 JALCXM010000009.1 GCA_022689325.1_02582 CDS open 34184-34792 609_na     202_aa rlmG Ribosomal RNA large subunit methyltransferase G
2583 JALCXM010000009.1 GCA_022689325.1_02583 CDS open 35068-35436 369_na     122_aa rplL 50S ribosomal protein L7L12
2584 JALCXM010000009.1 GCA_022689325.1_02584 CDS open 35474-35974 501_na     166_aa rplJ 50S ribosomal protein L10
2585 JALCXM010000009.1 misc_RNA open 36014-36162 L10_leader
2586 JALCXM010000009.1 GCA_022689325.1_02586 CDS open 36249-36944 696_na     231_aa rplA 50S ribosomal protein L1
2587 JALCXM010000009.1 GCA_022689325.1_02587 CDS open 37160-37582 423_na     140_aa rplK 50S ribosomal protein L11
2588 JALCXM010000009.1 GCA_022689325.1_02588 CDS open 37783-38331 549_na     182_aa nusG Transcription terminationantitermination protein NusG
2589 JALCXM010000009.1 GCA_022689325.1_02589 CDS open 38349-38543 195_na     64_aa secE Protein translocase subunit SecE
2590 JALCXM010000009.1 GCA_022689325.1_02590 CDS open 38877-39419 543_na     180_aa hypothetical protein
2591 JALCXM010000009.1 GCA_022689325.1_02591 CDS open 39530-40057 528_na     175_aa yacP putative protein YacP
2592 JALCXM010000009.1 GCA_022689325.1_02592 CDS open 40057-40803 747_na     248_aa Putative TrmH family tRNArRNA methyltransferase
2593 JALCXM010000009.1 GCA_022689325.1_02593 CDS open 40806-41210 405_na     134_aa mrnC Mini-ribonuclease 3
2594 JALCXM010000009.1 GCA_022689325.1_02594 CDS open 41203-42603 1401_na     466_aa cysS Cysteine--tRNA ligase
2595 JALCXM010000009.1 GCA_022689325.1_02595 CDS open 42587-43228 642_na     213_aa cysE Serine acetyltransferase
2596 JALCXM010000009.1 GCA_022689325.1_02596 CDS open 43591-45048 1458_na     485_aa gltX Glutamate--tRNA ligase
2597 JALCXM010000009.1 GCA_022689325.1_02597 CDS open 45372-46439 1068_na     355_aa yacL putative PIN and TRAM-domain containing protein YacL
2598 JALCXM010000009.1 GCA_022689325.1_02598 CDS open 46474-47841 1368_na     455_aa radA DNA repair protein RadA
2599 JALCXM010000009.1 GCA_022689325.1_02599 CDS open 48072-50531 2460_na     819_aa clpC ATP-dependent Clp protease ATP-binding subunit ClpC
2600 JALCXM010000009.1 GCA_022689325.1_02600 CDS open 50545-51561 1017_na     338_aa mcsB Protein-arginine kinase
2601 JALCXM010000009.1 GCA_022689325.1_02601 CDS open 51551-52108 558_na     185_aa mcsA Protein-arginine kinase activator protein
2602 JALCXM010000009.1 GCA_022689325.1_02602 CDS open 52135-52605 471_na     156_aa ctsR Transcriptional regulator CtsR
2603 JALCXM010000009.1 GCA_022689325.1_02603 CDS open 52750-53964 1215_na     404_aa nupC_2 Nucleoside permease NupC
2604 JALCXM010000009.1 GCA_022689325.1_02604 CDS open 54195-54749 555_na     184_aa pdxT Pyridoxal 5-phosphate synthase subunit PdxT
2605 JALCXM010000009.1 GCA_022689325.1_02605 CDS open 54753-55640 888_na     295_aa pdxS Pyridoxal 5-phosphate synthase subunit PdxS
2606 JALCXM010000009.1 GCA_022689325.1_02606 CDS open 55738-57120 1383_na     460_aa gabR HTH-type transcriptional regulatory protein GabR