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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_022689365.1)

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PROKKA Annotations for GCA_022689365.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
29 2640633 2496 6 1 47
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Annotation Table [page:6]    |    Number of Records Found: 2636 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JALCXL010000008.1 GCA_022689365.1_02501 CDS open 9483-10451 969_na     322_aa czcD_2 Cadmium%2C cobalt and zincH(+)-K(+) antiporter
2502 JALCXL010000008.1 GCA_022689365.1_02502 CDS open 10444-10767 324_na     107_aa czrA HTH-type transcriptional repressor CzrA
2503 JALCXL010000008.1 GCA_022689365.1_02503 CDS open 10922-11581 660_na     219_aa yhfK putative sugar epimerase YhfK
2504 JALCXL010000008.1 GCA_022689365.1_02504 CDS open 11867-12805 939_na     312_aa gmuF putative mannose-6-phosphate isomerase GmuF
2505 JALCXL010000008.1 GCA_022689365.1_02505 CDS open 12845-13078 234_na     77_aa hypothetical protein
2506 JALCXL010000008.1 GCA_022689365.1_02506 CDS open 13328-14704 1377_na     458_aa hypothetical protein
2507 JALCXL010000008.1 GCA_022689365.1_02507 CDS open 14955-15365 411_na     136_aa hypothetical protein
2508 JALCXL010000008.1 GCA_022689365.1_02508 CDS open 15566-16012 447_na     148_aa dps General stress protein 20U
2509 JALCXL010000008.1 GCA_022689365.1_02509 CDS open 16090-16800 711_na     236_aa deoD Purine nucleoside phosphorylase DeoD-type
2510 JALCXL010000008.1 GCA_022689365.1_02510 CDS open 16979-17638 660_na     219_aa deoC1 Deoxyribose-phosphate aldolase 1
2511 JALCXL010000008.1 GCA_022689365.1_02511 CDS open 17699-19000 1302_na     433_aa pdp Pyrimidine-nucleoside phosphorylase
2512 JALCXL010000008.1 GCA_022689365.1_02512 CDS open 19011-20198 1188_na     395_aa deoB Phosphopentomutase
2513 JALCXL010000008.1 GCA_022689365.1_02513 CDS open 20198-20548 351_na     116_aa hypothetical protein
2514 JALCXL010000008.1 GCA_022689365.1_02514 CDS open 21148-21372 225_na     74_aa hypothetical protein
2515 JALCXL010000008.1 GCA_022689365.1_02515 CDS open 21382-23376 1995_na     664_aa feoB Fe(2+) transporter FeoB
2516 JALCXL010000008.1 GCA_022689365.1_02516 CDS open 23388-23549 162_na     53_aa hypothetical protein
2517 JALCXL010000008.1 GCA_022689365.1_02517 CDS open 23954-24424 471_na     156_aa luxS S-ribosylhomocysteine lyase
2518 JALCXL010000008.1 GCA_022689365.1_02518 CDS open 24679-25863 1185_na     394_aa N-acetyldiaminopimelate deacetylase
2519 JALCXL010000008.1 GCA_022689365.1_02519 CDS open 25863-27053 1191_na     396_aa hypothetical protein
2520 JALCXL010000008.1 GCA_022689365.1_02520 CDS open 27315-27980 666_na     221_aa hypothetical protein
2521 JALCXL010000008.1 GCA_022689365.1_02521 CDS open 28028-28828 801_na     266_aa coaW Type II pantothenate kinase
2522 JALCXL010000008.1 GCA_022689365.1_02522 CDS open 28986-29846 861_na     286_aa hypothetical protein
2523 JALCXL010000008.1 GCA_022689365.1_02523 CDS open 29957-30478 522_na     173_aa rpoE putative DNA-directed RNA polymerase subunit delta
2524 JALCXL010000008.1 misc_RNA open 30570-30639 tsr31
2525 JALCXL010000008.1 GCA_022689365.1_02525 CDS open 30801-32408 1608_na     535_aa pyrG CTP synthase
2526 JALCXL010000008.1 GCA_022689365.1_02526 CDS open 32456-32977 522_na     173_aa hypothetical protein
2527 JALCXL010000008.1 GCA_022689365.1_02527 CDS open 33182-34039 858_na     285_aa fba Fructose-bisphosphate aldolase
2528 JALCXL010000008.1 GCA_022689365.1_02528 CDS open 34307-35575 1269_na     422_aa murA2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2
2529 JALCXL010000008.1 GCA_022689365.1_02529 CDS open 35707-36039 333_na     110_aa yodB HTH-type transcriptional regulator YodB
2530 JALCXL010000008.1 GCA_022689365.1_02530 CDS open 36288-37715 1428_na     475_aa Putative aldehyde dehydrogenase
2531 JALCXL010000008.1 GCA_022689365.1_02531 CDS open 37905-39221 1317_na     438_aa rho Transcription termination factor Rho
2532 JALCXL010000008.1 GCA_022689365.1_02532 CDS open 39338-39595 258_na     85_aa rpmE2 50S ribosomal protein L31 type B
2533 JALCXL010000008.1 GCA_022689365.1_02533 CDS open 39795-40394 600_na     199_aa tdk Thymidine kinase
2534 JALCXL010000008.1 GCA_022689365.1_02534 CDS open 40394-41470 1077_na     358_aa prfA Peptide chain release factor 1
2535 JALCXL010000008.1 GCA_022689365.1_02535 CDS open 41457-42296 840_na     279_aa prmC Release factor glutamine methyltransferase
2536 JALCXL010000008.1 GCA_022689365.1_02536 CDS open 42384-43418 1035_na     344_aa ywlC Threonylcarbamoyl-AMP synthase
2537 JALCXL010000008.1 GCA_022689365.1_02537 CDS open 43424-43846 423_na     140_aa ptpB Low molecular weight protein-tyrosine-phosphatase PtpB
2538 JALCXL010000008.1 GCA_022689365.1_02538 CDS open 43955-44479 525_na     174_aa hypothetical protein
2539 JALCXL010000008.1 GCA_022689365.1_02539 CDS open 44502-45740 1239_na     412_aa glyA Serine hydroxymethyltransferase
2540 JALCXL010000008.1 GCA_022689365.1_02540 CDS open 45762-46391 630_na     209_aa upp Uracil phosphoribosyltransferase
2541 JALCXL010000008.1 GCA_022689365.1_02541 CDS open 46672-47022 351_na     116_aa hypothetical protein
2542 JALCXL010000008.1 GCA_022689365.1_02542 CDS open 47049-47777 729_na     242_aa atpB ATP synthase subunit a
2543 JALCXL010000008.1 GCA_022689365.1_02543 CDS open 47809-48021 213_na     70_aa atpE ATP synthase subunit c
2544 JALCXL010000008.1 GCA_022689365.1_02544 CDS open 48113-48637 525_na     174_aa atpF ATP synthase subunit b
2545 JALCXL010000008.1 GCA_022689365.1_02545 CDS open 48637-49176 540_na     179_aa atpH ATP synthase subunit delta
2546 JALCXL010000008.1 GCA_022689365.1_02546 CDS open 49196-50704 1509_na     502_aa atpA ATP synthase subunit alpha
2547 JALCXL010000008.1 GCA_022689365.1_02547 CDS open 50736-51602 867_na     288_aa atpG ATP synthase gamma chain
2548 JALCXL010000008.1 GCA_022689365.1_02548 CDS open 51624-53036 1413_na     470_aa atpD ATP synthase subunit beta
2549 JALCXL010000008.1 GCA_022689365.1_02549 CDS open 53058-53459 402_na     133_aa atpC ATP synthase epsilon chain
2550 JALCXL010000008.1 GCA_022689365.1_02550 CDS open 53597-53830 234_na     77_aa hypothetical protein
2551 JALCXL010000008.1 GCA_022689365.1_02551 CDS open 53994-55259 1266_na     421_aa murA1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
2552 JALCXL010000008.1 GCA_022689365.1_02552 CDS open 55296-55736 441_na     146_aa fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
2553 JALCXL010000008.1 GCA_022689365.1_02553 CDS open 56133-56585 453_na     150_aa hypothetical protein
2554 JALCXL010000008.1 GCA_022689365.1_02554 CDS open 56774-57175 402_na     133_aa Single-stranded DNA-binding protein
2555 JALCXL010000008.1 GCA_022689365.1_02555 CDS open 57654-58361 708_na     235_aa sceD putative transglycosylase SceD
2556 JALCXL010000008.1 misc_RNA open 58584-58687 TPP
2557 JALCXL010000008.1 GCA_022689365.1_02557 CDS open 58774-59451 678_na     225_aa tenA Aminopyrimidine aminohydrolase
2558 JALCXL010000008.1 GCA_022689365.1_02558 CDS open 59456-60277 822_na     273_aa thiD Hydroxymethylpyrimidinephosphomethylpyrimidine kinase
2559 JALCXL010000008.1 GCA_022689365.1_02559 CDS open 60270-61058 789_na     262_aa thiM Hydroxyethylthiazole kinase
2560 JALCXL010000008.1 GCA_022689365.1_02560 CDS open 61061-61699 639_na     212_aa thiE Thiamine-phosphate synthase
2561 JALCXL010000008.1 GCA_022689365.1_02561 CDS open 61789-62664 876_na     291_aa yidC_3 Membrane protein insertase YidC
2562 JALCXL010000008.1 GCA_022689365.1_02562 CDS open 63048-63689 642_na     213_aa yedJ putative protein YedJ
2563 JALCXL010000008.1 GCA_022689365.1_02563 CDS open 63811-65295 1485_na     494_aa cls_2 Cardiolipin synthase
2564 JALCXL010000008.1 GCA_022689365.1_02564 CDS open 65452-65754 303_na     100_aa csoR Copper-sensing transcriptional repressor CsoR
2565 JALCXL010000008.1 GCA_022689365.1_02565 CDS open 65767-65979 213_na     70_aa hypothetical protein
2566 JALCXL010000008.1 GCA_022689365.1_02566 CDS open 66070-66207 138_na     45_aa hypothetical protein
2567 JALCXL010000008.1 GCA_022689365.1_02567 CDS open 66621-67811 1191_na     396_aa rodA Peptidoglycan glycosyltransferase RodA
2568 JALCXL010000008.1 GCA_022689365.1_02568 CDS open 68167-69237 1071_na     356_aa ddl D-alanine--D-alanine ligase
2569 JALCXL010000008.1 GCA_022689365.1_02569 CDS open 69255-70613 1359_na     452_aa murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
2570 JALCXL010000008.1 GCA_022689365.1_02570 CDS open 70848-72362 1515_na     504_aa cshA DEAD-box ATP-dependent RNA helicase CshA
2571 JALCXL010000008.1 GCA_022689365.1_02571 CDS open 72687-73169 483_na     160_aa hypothetical protein
2572 JALCXL010000008.1 GCA_022689365.1_02572 CDS open 73162-74676 1515_na     504_aa hypothetical protein
2573 JALCXL010000008.1 GCA_022689365.1_02573 CDS open 74663-75175 513_na     170_aa hypothetical protein
2574 JALCXL010000008.1 GCA_022689365.1_02574 CDS open 75187-75579 393_na     130_aa acpS Holo-[acyl-carrier-protein] synthase
2575 JALCXL010000008.1 GCA_022689365.1_02575 CDS open 75627-76775 1149_na     382_aa alr1 Alanine racemase 1
2576 JALCXL010000008.1 GCA_022689365.1_02576 CDS open 76862-77032 171_na     56_aa mazE Antitoxin MazE
2577 JALCXL010000008.1 GCA_022689365.1_02577 CDS open 77029-77379 351_na     116_aa mazF Endoribonuclease MazF
2578 JALCXL010000008.1 GCA_022689365.1_02578 CDS open 77813-78814 1002_na     333_aa rsbU Phosphoserine phosphatase RsbU
2579 JALCXL010000008.1 GCA_022689365.1_02579 CDS open 78905-79231 327_na     108_aa rsbV Anti-sigma-B factor antagonist
2580 JALCXL010000008.1 GCA_022689365.1_02580 CDS open 79233-79712 480_na     159_aa rsbW Serine-protein kinase RsbW
2581 JALCXL010000008.1 GCA_022689365.1_02581 CDS open 79687-80457 771_na     256_aa sigB RNA polymerase sigma-B factor
2582 JALCXL010000008.1 GCA_022689365.1_02582 CDS open 80576-82726 2151_na     716_aa yhgF Protein YhgF
2583 JALCXL010000008.1 GCA_022689365.1_02583 CDS open 82719-83177 459_na     152_aa Protein SprT-like protein
2584 JALCXL010000008.1 tRNA open 83485-83570 tRNA-Leu(gag)
2585 JALCXL010000008.1 tRNA open 83587-83658 tRNA-Gly(tcc)
2586 JALCXL010000009.1 GCA_022689365.1_02586 CDS open 237-1619 1383_na     460_aa gabR HTH-type transcriptional regulatory protein GabR
2587 JALCXL010000009.1 GCA_022689365.1_02587 CDS open 1717-2604 888_na     295_aa pdxS Pyridoxal 5-phosphate synthase subunit PdxS
2588 JALCXL010000009.1 GCA_022689365.1_02588 CDS open 2608-3162 555_na     184_aa pdxT Pyridoxal 5-phosphate synthase subunit PdxT
2589 JALCXL010000009.1 GCA_022689365.1_02589 CDS open 3393-4607 1215_na     404_aa nupC_2 Nucleoside permease NupC
2590 JALCXL010000009.1 GCA_022689365.1_02590 CDS open 4752-5222 471_na     156_aa ctsR Transcriptional regulator CtsR
2591 JALCXL010000009.1 GCA_022689365.1_02591 CDS open 5249-5806 558_na     185_aa mcsA Protein-arginine kinase activator protein
2592 JALCXL010000009.1 GCA_022689365.1_02592 CDS open 5796-6812 1017_na     338_aa mcsB Protein-arginine kinase
2593 JALCXL010000009.1 GCA_022689365.1_02593 CDS open 6826-9285 2460_na     819_aa clpC ATP-dependent Clp protease ATP-binding subunit ClpC
2594 JALCXL010000009.1 GCA_022689365.1_02594 CDS open 9516-10883 1368_na     455_aa radA DNA repair protein RadA
2595 JALCXL010000009.1 GCA_022689365.1_02595 CDS open 10918-11985 1068_na     355_aa yacL putative PIN and TRAM-domain containing protein YacL
2596 JALCXL010000009.1 GCA_022689365.1_02596 CDS open 12309-13766 1458_na     485_aa gltX Glutamate--tRNA ligase
2597 JALCXL010000009.1 GCA_022689365.1_02597 CDS open 14129-14770 642_na     213_aa cysE Serine acetyltransferase
2598 JALCXL010000009.1 GCA_022689365.1_02598 CDS open 14754-16154 1401_na     466_aa cysS Cysteine--tRNA ligase
2599 JALCXL010000009.1 GCA_022689365.1_02599 CDS open 16147-16551 405_na     134_aa mrnC Mini-ribonuclease 3
2600 JALCXL010000009.1 GCA_022689365.1_02600 CDS open 16554-17300 747_na     248_aa Putative TrmH family tRNArRNA methyltransferase
2601 JALCXL010000009.1 GCA_022689365.1_02601 CDS open 17300-17827 528_na     175_aa yacP putative protein YacP
2602 JALCXL010000009.1 GCA_022689365.1_02602 CDS open 17938-18480 543_na     180_aa hypothetical protein
2603 JALCXL010000009.1 GCA_022689365.1_02603 CDS open 18814-19008 195_na     64_aa secE Protein translocase subunit SecE
2604 JALCXL010000009.1 GCA_022689365.1_02604 CDS open 19026-19574 549_na     182_aa nusG Transcription terminationantitermination protein NusG
2605 JALCXL010000009.1 GCA_022689365.1_02605 CDS open 19775-20197 423_na     140_aa rplK 50S ribosomal protein L11
2606 JALCXL010000009.1 GCA_022689365.1_02606 CDS open 20413-21108 696_na     231_aa rplA 50S ribosomal protein L1
2607 JALCXL010000009.1 misc_RNA open 21195-21343 L10_leader
2608 JALCXL010000009.1 GCA_022689365.1_02608 CDS open 21384-21884 501_na     166_aa rplJ 50S ribosomal protein L10
2609 JALCXL010000009.1 GCA_022689365.1_02609 CDS open 21922-22290 369_na     122_aa rplL 50S ribosomal protein L7L12
2610 JALCXL010000009.1 GCA_022689365.1_02610 CDS open 22566-23174 609_na     202_aa rlmG Ribosomal RNA large subunit methyltransferase G
2611 JALCXL010000009.1 GCA_022689365.1_02611 CDS open 23376-26930 3555_na     1184_aa rpoB DNA-directed RNA polymerase subunit beta
2612 JALCXL010000009.1 GCA_022689365.1_02612 CDS open 27089-30712 3624_na     1207_aa rpoC DNA-directed RNA polymerase subunit beta
2613 JALCXL010000009.1 GCA_022689365.1_02613 CDS open 30974-31234 261_na     86_aa rplGB Ribosome-associated protein L7Ae-like protein
2614 JALCXL010000009.1 GCA_022689365.1_02614 CDS open 31324-31737 414_na     137_aa rpsL 30S ribosomal protein S12
2615 JALCXL010000009.1 GCA_022689365.1_02615 CDS open 31808-32278 471_na     156_aa rpsG 30S ribosomal protein S7
2616 JALCXL010000009.1 GCA_022689365.1_02616 CDS open 32398-34479 2082_na     693_aa fusA Elongation factor G
2617 JALCXL010000009.1 GCA_022689365.1_02617 CDS open 34698-35882 1185_na     394_aa tuf Elongation factor Tu
2618 JALCXL010000009.1 GCA_022689365.1_02618 CDS open 35997-37163 1167_na     388_aa scmP_4 N-acetylcysteine deacetylase
2619 JALCXL010000009.1 GCA_022689365.1_02619 CDS open 37733-38923 1191_na     396_aa Putative pyridoxal phosphate-dependent acyltransferase
2620 JALCXL010000009.1 GCA_022689365.1_02620 CDS open 39026-39988 963_na     320_aa arcB Delta(1)-pyrroline-2-carboxylate reductase
2621 JALCXL010000009.1 GCA_022689365.1_02621 CDS open 40107-40613 507_na     168_aa hypothetical protein
2622 JALCXL010000009.1 GCA_022689365.1_02622 CDS open 40624-41043 420_na     139_aa nudG CTP pyrophosphohydrolase
2623 JALCXL010000009.1 GCA_022689365.1_02623 CDS open 41093-41344 252_na     83_aa hypothetical protein
2624 JALCXL010000009.1 GCA_022689365.1_02624 CDS open 41385-41717 333_na     110_aa argO Arginine exporter protein ArgO
2625 JALCXL010000009.1 GCA_022689365.1_02625 CDS open 42417-43370 954_na     317_aa putative epimerasedehydratase
2626 JALCXL010000009.1 GCA_022689365.1_02626 CDS open 43591-44667 1077_na     358_aa ilvE putative branched-chain-amino-acid aminotransferase
2627 JALCXL010000009.1 GCA_022689365.1_02627 CDS open 45477-46796 1320_na     439_aa steT Serinethreonine exchanger SteT
2628 JALCXL010000009.1 GCA_022689365.1_02628 CDS open 46825-47865 1041_na     346_aa tdcB L-threonine dehydratase catabolic TdcB
2629 JALCXL010000009.1 GCA_022689365.1_02629 CDS open 47961-49079 1119_na     372_aa ald1 Alanine dehydrogenase 1
2630 JALCXL010000009.1 GCA_022689365.1_02630 CDS open 49679-50371 693_na     230_aa gph Phosphoglycolate phosphatase
2631 JALCXL010000009.1 GCA_022689365.1_02631 CDS open 50560-51234 675_na     224_aa dck Deoxyadenosinedeoxycytidine kinase
2632 JALCXL010000009.1 GCA_022689365.1_02632 CDS open 51227-51844 618_na     205_aa dgk Deoxyguanosine kinase
2633 JALCXL010000009.1 GCA_022689365.1_02633 CDS open 51908-52384 477_na     158_aa tadA_2 tRNA-specific adenosine deaminase
2634 JALCXL010000009.1 GCA_022689365.1_02634 CDS open 52508-53377 870_na     289_aa ywpJ Phosphatase YwpJ
2635 JALCXL010000009.1 GCA_022689365.1_02635 CDS open 53393-53959 567_na     188_aa azo1 FMN-dependent NADPH-azoreductase
2636 JALCXL010000009.1 GCA_022689365.1_02636 CDS open 54382-54708 327_na     108_aa hypothetical protein