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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_022689385.1)

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PROKKA Annotations for GCA_022689385.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
55 2639987 2495 7 1 37
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Annotation Table [page:6]    |    Number of Records Found: 2625 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JALCXO010000008.1 GCA_022689385.1_02501 CDS open 44468-45037 570_na     189_aa fapR Transcription factor FapR
2502 JALCXO010000008.1 GCA_022689385.1_02502 CDS open 45152-47197 2046_na     681_aa recG ATP-dependent DNA helicase RecG
2503 JALCXO010000008.1 GCA_022689385.1_02503 CDS open 47474-49129 1656_na     551_aa putative protein
2504 JALCXO010000008.1 GCA_022689385.1_02504 CDS open 49143-49517 375_na     124_aa putative protein
2505 JALCXO010000008.1 GCA_022689385.1_02505 CDS open 49906-50094 189_na     62_aa rpmB 50S ribosomal protein L28
2506 JALCXO010000008.1 GCA_022689385.1_02506 CDS open 50220-50861 642_na     213_aa thiN Thiamine pyrophosphokinase
2507 JALCXO010000008.1 GCA_022689385.1_02507 CDS open 50868-51512 645_na     214_aa rpe Ribulose-phosphate 3-epimerase
2508 JALCXO010000008.1 GCA_022689385.1_02508 CDS open 51512-52387 876_na     291_aa rsgA Small ribosomal subunit biogenesis GTPase RsgA
2509 JALCXO010000008.1 GCA_022689385.1_02509 CDS open 52571-54574 2004_na     667_aa prkC Serinethreonine-protein kinase PrkC
2510 JALCXO010000008.1 GCA_022689385.1_02510 CDS open 54571-55314 744_na     247_aa stp Serinethreonine phosphatase stp
2511 JALCXO010000008.1 GCA_022689385.1_02511 CDS open 55321-56415 1095_na     364_aa rlmN putative dual-specificity RNA methyltransferase RlmN
2512 JALCXO010000008.1 GCA_022689385.1_02512 CDS open 56418-57725 1308_na     435_aa rsmB Ribosomal RNA small subunit methyltransferase B
2513 JALCXO010000008.1 GCA_022689385.1_02513 CDS open 57722-58654 933_na     310_aa fmt Methionyl-tRNA formyltransferase
2514 JALCXO010000008.1 GCA_022689385.1_02514 CDS open 58647-59135 489_na     162_aa def1 Peptide deformylase 1
2515 JALCXO010000008.1 GCA_022689385.1_02515 CDS open 59486-61894 2409_na     802_aa priA primosomal protein N
2516 JALCXO010000008.1 GCA_022689385.1_02516 CDS open 61894-63093 1200_na     399_aa coaBC Coenzyme A biosynthesis bifunctional protein CoaBC
2517 JALCXO010000008.1 GCA_022689385.1_02517 CDS open 63320-63532 213_na     70_aa rpoZ DNA-directed RNA polymerase subunit omega
2518 JALCXO010000008.1 GCA_022689385.1_02518 CDS open 63532-64155 624_na     207_aa gmk Guanylate kinase
2519 JALCXO010000008.1 GCA_022689385.1_02519 CDS open 64315-66012 1698_na     565_aa rqcH Rqc2 RqcH
2520 JALCXO010000008.1 GCA_022689385.1_02520 CDS open 66206-66622 417_na     138_aa hypothetical protein
2521 JALCXO010000008.1 GCA_022689385.1_02521 CDS open 66950-67180 231_na     76_aa hypothetical protein
2522 JALCXO010000008.1 GCA_022689385.1_02522 CDS open 67208-67819 612_na     203_aa pyrE Orotate phosphoribosyltransferase
2523 JALCXO010000008.1 GCA_022689385.1_02523 CDS open 67820-68512 693_na     230_aa pyrF Orotidine 5-phosphate decarboxylase
2524 JALCXO010000008.1 GCA_022689385.1_02524 CDS open 68689-71862 3174_na     1057_aa carB Carbamoyl-phosphate synthase large chain
2525 JALCXO010000008.1 GCA_022689385.1_02525 CDS open 71855-72955 1101_na     366_aa carA Carbamoyl-phosphate synthase small chain
2526 JALCXO010000008.1 GCA_022689385.1_02526 CDS open 72957-74231 1275_na     424_aa pyrC Dihydroorotase
2527 JALCXO010000008.1 GCA_022689385.1_02527 CDS open 74231-75130 900_na     299_aa pyrB Aspartate carbamoyltransferase
2528 JALCXO010000008.1 GCA_022689385.1_02528 CDS open 75151-76446 1296_na     431_aa pyrP Uracil permease
2529 JALCXO010000008.1 GCA_022689385.1_02529 CDS open 76750-77277 528_na     175_aa pyrR Bifunctional protein PyrR
2530 JALCXO010000008.1 GCA_022689385.1_02530 CDS open 77582-78499 918_na     305_aa rluD Ribosomal large subunit pseudouridine synthase D
2531 JALCXO010000008.1 GCA_022689385.1_02531 CDS open 78513-78986 474_na     157_aa lspA Lipoprotein signal peptidase
2532 JALCXO010000008.1 GCA_022689385.1_02532 CDS open 79293-80090 798_na     265_aa hypothetical protein
2533 JALCXO010000008.1 GCA_022689385.1_02533 CDS open 80466-83216 2751_na     916_aa ileS Isoleucine--tRNA ligase
2534 JALCXO010000008.1 GCA_022689385.1_02534 CDS open 83445-84077 633_na     210_aa hypothetical protein
2535 JALCXO010000008.1 GCA_022689385.1_02535 CDS open 84101-84895 795_na     264_aa hypothetical protein
2536 JALCXO010000008.1 GCA_022689385.1_02536 CDS open 84958-85254 297_na     98_aa hypothetical protein
2537 JALCXO010000008.1 GCA_022689385.1_02537 CDS open 85266-85844 579_na     192_aa sepF Cell division protein SepF
2538 JALCXO010000008.1 GCA_022689385.1_02538 CDS open 85858-86526 669_na     222_aa Pyridoxal phosphate homeostasis protein
2539 JALCXO010000008.1 GCA_022689385.1_02539 CDS open 86545-87336 792_na     263_aa Polyphenol oxidase
2540 JALCXO010000008.1 GCA_022689385.1_02540 CDS open 87493-88674 1182_na     393_aa ftsZ Cell division protein FtsZ
2541 JALCXO010000008.1 GCA_022689385.1_02541 CDS open 88704-89225 522_na     173_aa ftsA Cell division protein FtsA
2542 JALCXO010000009.1 misc_RNA open 18-266 S35
2543 JALCXO010000009.1 GCA_022689385.1_02543 CDS open 203-1585 1383_na     460_aa norB_2 Quinolone resistance protein NorB
2544 JALCXO010000009.1 GCA_022689385.1_02544 CDS open 1592-4624 3033_na     1010_aa namA NADPH dehydrogenase
2545 JALCXO010000009.1 GCA_022689385.1_02545 CDS open 4702-5622 921_na     306_aa apbE FAD:protein FMN transferase
2546 JALCXO010000009.1 GCA_022689385.1_02546 CDS open 5918-6430 513_na     170_aa hypothetical protein
2547 JALCXO010000009.1 GCA_022689385.1_02547 CDS open 6944-8143 1200_na     399_aa patB Cystathionine beta-lyase PatB
2548 JALCXO010000009.1 GCA_022689385.1_02548 CDS open 8647-8949 303_na     100_aa hypothetical protein
2549 JALCXO010000009.1 GCA_022689385.1_02549 CDS open 9453-10805 1353_na     450_aa lpd_2 Dihydrolipoyl dehydrogenase
2550 JALCXO010000009.1 GCA_022689385.1_02550 CDS open 10894-11841 948_na     315_aa acoA Acetoin:2%2C6-dichlorophenolindophenol oxidoreductase subunit alpha
2551 JALCXO010000009.1 GCA_022689385.1_02551 CDS open 11857-12897 1041_na     346_aa acoB Acetoin:2%2C6-dichlorophenolindophenol oxidoreductase subunit beta
2552 JALCXO010000009.1 GCA_022689385.1_02552 CDS open 12915-14204 1290_na     429_aa pdhC_3 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
2553 JALCXO010000009.1 GCA_022689385.1_02553 CDS open 14350-14688 339_na     112_aa hypothetical protein
2554 JALCXO010000009.1 GCA_022689385.1_02554 CDS open 14678-15442 765_na     254_aa hypothetical protein
2555 JALCXO010000009.1 GCA_022689385.1_02555 CDS open 16058-16387 330_na     109_aa hypothetical protein
2556 JALCXO010000009.1 misc_RNA open 16386-16599 S35
2557 JALCXO010000009.1 GCA_022689385.1_02557 CDS open 16771-17544 774_na     257_aa hypothetical protein
2558 JALCXO010000009.1 GCA_022689385.1_02558 CDS open 17776-19635 1860_na     619_aa manR_1 Transcriptional regulator ManR
2559 JALCXO010000009.1 GCA_022689385.1_02559 CDS open 19715-21664 1950_na     649_aa manP PTS system mannose-specific EIIBCA component
2560 JALCXO010000009.1 GCA_022689385.1_02560 CDS open 21680-22618 939_na     312_aa yvyI Putative mannose-6-phosphate isomerase YvyI
2561 JALCXO010000009.1 GCA_022689385.1_02561 CDS open 22783-23697 915_na     304_aa thiY Formylaminopyrimidine-binding protein
2562 JALCXO010000009.1 misc_RNA open 23797-23897 TPP
2563 JALCXO010000009.1 GCA_022689385.1_02563 CDS open 24025-24390 366_na     121_aa hypothetical protein
2564 JALCXO010000009.1 GCA_022689385.1_02564 CDS open 24706-24939 234_na     77_aa hypothetical protein
2565 JALCXO010000009.1 GCA_022689385.1_02565 CDS open 25167-26273 1107_na     368_aa hypothetical protein
2566 JALCXO010000009.1 GCA_022689385.1_02566 CDS open 26275-27051 777_na     258_aa yidC_3 Membrane protein insertase YidC
2567 JALCXO010000009.1 GCA_022689385.1_02567 CDS open 27855-30023 2169_na     722_aa odcI Inducible ornithine decarboxylase
2568 JALCXO010000009.1 GCA_022689385.1_02568 CDS open 30038-31366 1329_na     442_aa potE Putrescine transporter PotE
2569 JALCXO010000009.1 GCA_022689385.1_02569 CDS open 31515-32435 921_na     306_aa hypothetical protein
2570 JALCXO010000009.1 GCA_022689385.1_02570 CDS open 32609-32995 387_na     128_aa hypothetical protein
2571 JALCXO010000009.1 GCA_022689385.1_02571 CDS open 33111-33551 441_na     146_aa hypothetical protein
2572 JALCXO010000009.1 GCA_022689385.1_02572 CDS open 33536-33745 210_na     69_aa hypothetical protein
2573 JALCXO010000009.1 GCA_022689385.1_02573 CDS open 33763-33954 192_na     63_aa hypothetical protein
2574 JALCXO010000009.1 GCA_022689385.1_02574 CDS open 33967-34308 342_na     113_aa hypothetical protein
2575 JALCXO010000009.1 GCA_022689385.1_02575 CDS open 34566-35588 1023_na     340_aa Lipoate--protein ligase 2
2576 JALCXO010000009.1 GCA_022689385.1_02576 CDS open 35600-36490 891_na     296_aa Protein ADP-ribosyltransferase
2577 JALCXO010000009.1 GCA_022689385.1_02577 CDS open 36480-37277 798_na     265_aa Protein-ADP-ribose hydrolase
2578 JALCXO010000009.1 GCA_022689385.1_02578 CDS open 37278-37610 333_na     110_aa Glycine cleavage system H-like protein
2579 JALCXO010000009.1 GCA_022689385.1_02579 CDS open 37632-38636 1005_na     334_aa hypothetical protein
2580 JALCXO010000009.1 GCA_022689385.1_02580 CDS open 38854-40065 1212_na     403_aa putative oxidoreductase
2581 JALCXO010000009.1 GCA_022689385.1_02581 CDS open 40121-40732 612_na     203_aa hypothetical protein
2582 JALCXO010000009.1 GCA_022689385.1_02582 CDS open 41362-42978 1617_na     538_aa ectT Ectoinehydroxyectoine transporter
2583 JALCXO010000009.1 GCA_022689385.1_02583 CDS open 43238-44407 1170_na     389_aa nagA N-acetylglucosamine-6-phosphate deacetylase
2584 JALCXO010000009.1 GCA_022689385.1_02584 CDS open 44450-44695 246_na     81_aa hypothetical protein
2585 JALCXO010000009.1 GCA_022689385.1_02585 CDS open 44792-45526 735_na     244_aa nagB_2 Glucosamine-6-phosphate deaminase
2586 JALCXO010000009.1 GCA_022689385.1_02586 CDS open 45574-46245 672_na     223_aa nanE Putative N-acetylmannosamine-6-phosphate 2-epimerase
2587 JALCXO010000009.1 GCA_022689385.1_02587 CDS open 46412-47209 798_na     265_aa ybbH_2 putative HTH-type transcriptional regulator YbbH
2588 JALCXO010000009.1 GCA_022689385.1_02588 CDS open 47305-48168 864_na     287_aa bglK Beta-glucoside kinase
2589 JALCXO010000009.1 GCA_022689385.1_02589 CDS open 48410-49291 882_na     293_aa nanA N-acetylneuraminate lyase
2590 JALCXO010000009.1 GCA_022689385.1_02590 CDS open 49325-50854 1530_na     509_aa sglT Sodiumglucose cotransporter
2591 JALCXO010000009.1 misc_RNA open 50944-51167 tsr24
2592 JALCXO010000009.1 GCA_022689385.1_02592 CDS open 51647-52867 1221_na     406_aa nupC_2 Nucleoside permease NupC
2593 JALCXO010000009.1 GCA_022689385.1_02593 CDS open 52877-53788 912_na     303_aa psuG Pseudouridine-5-phosphate glycosidase
2594 JALCXO010000009.1 GCA_022689385.1_02594 CDS open 53772-54878 1107_na     368_aa RBKS Ribokinase
2595 JALCXO010000009.1 GCA_022689385.1_02595 CDS open 55179-55997 819_na     272_aa hypothetical protein
2596 JALCXO010000009.1 GCA_022689385.1_02596 CDS open 56017-56598 582_na     193_aa hypothetical protein
2597 JALCXO010000009.1 GCA_022689385.1_02597 CDS open 56757-57557 801_na     266_aa hypothetical protein
2598 JALCXO010000009.1 GCA_022689385.1_02598 CDS open 57846-58493 648_na     215_aa hypothetical protein
2599 JALCXO010000009.1 GCA_022689385.1_02599 CDS open 58585-59223 639_na     212_aa pcp Pyrrolidone-carboxylate peptidase
2600 JALCXO010000009.1 GCA_022689385.1_02600 CDS open 59268-60194 927_na     308_aa hypothetical protein
2601 JALCXO010000009.1 GCA_022689385.1_02601 CDS open 60175-60891 717_na     238_aa hypothetical protein
2602 JALCXO010000009.1 GCA_022689385.1_02602 CDS open 61176-62549 1374_na     457_aa norB_3 Quinolone resistance protein NorB
2603 JALCXO010000009.1 GCA_022689385.1_02603 CDS open 62667-63647 981_na     326_aa yxeI_2 putative protein YxeI
2604 JALCXO010000009.1 GCA_022689385.1_02604 CDS open 63859-65790 1932_na     643_aa manR_2 Transcriptional regulator ManR
2605 JALCXO010000009.1 GCA_022689385.1_02605 CDS open 65806-66252 447_na     148_aa ulaC_2 Ascorbate-specific PTS system EIIA component
2606 JALCXO010000009.1 GCA_022689385.1_02606 CDS open 66252-66536 285_na     94_aa hypothetical protein
2607 JALCXO010000009.1 GCA_022689385.1_02607 CDS open 66551-67912 1362_na     453_aa ulaA_2 Ascorbate-specific PTS system EIIC component
2608 JALCXO010000009.1 GCA_022689385.1_02608 CDS open 67974-68936 963_na     320_aa hypothetical protein
2609 JALCXO010000009.1 GCA_022689385.1_02609 CDS open 69167-70144 978_na     325_aa Lactonase drp35
2610 JALCXO010000009.1 GCA_022689385.1_02610 CDS open 70294-70860 567_na     188_aa cetB 2-epi-5-epi-valiolone epimerase
2611 JALCXO010000009.1 GCA_022689385.1_02611 CDS open 70874-71278 405_na     134_aa hypothetical protein
2612 JALCXO010000009.1 GCA_022689385.1_02612 CDS open 71401-72285 885_na     294_aa rbsK/rbiA Bifunctional ribokinaseribose-5-phosphate isomerase A
2613 JALCXO010000009.1 GCA_022689385.1_02613 CDS open 72375-73010 636_na     211_aa hypothetical protein
2614 JALCXO010000009.1 GCA_022689385.1_02614 CDS open 73010-73852 843_na     280_aa btuD_7 Vitamin B12 import ATP-binding protein BtuD
2615 JALCXO010000009.1 GCA_022689385.1_02615 CDS open 73911-74627 717_na     238_aa hypothetical protein
2616 JALCXO010000009.1 GCA_022689385.1_02616 CDS open 74624-74827 204_na     67_aa hypothetical protein
2617 JALCXO010000009.1 GCA_022689385.1_02617 CDS open 75472-75843 372_na     123_aa hypothetical protein
2618 JALCXO010000009.1 GCA_022689385.1_02618 CDS open 77015-77857 843_na     280_aa qorB Quinone oxidoreductase 2
2619 JALCXO010000009.1 GCA_022689385.1_02619 CDS open 78044-78403 360_na     119_aa hypothetical protein
2620 JALCXO010000009.1 GCA_022689385.1_02620 CDS open 78416-79468 1053_na     350_aa luxA Alkanal monooxygenase alpha chain
2621 JALCXO010000009.1 GCA_022689385.1_02621 CDS open 80114-82093 1980_na     659_aa hypothetical protein
2622 JALCXO010000009.1 GCA_022689385.1_02622 CDS open 82599-84605 2007_na     668_aa N-acetylmuramoyl-L-alanine amidase domain-containing protein
2623 JALCXO010000009.1 GCA_022689385.1_02623 CDS open 84914-87751 2838_na     945_aa hypothetical protein
2624 JALCXO010000009.1 GCA_022689385.1_02624 CDS open 87814-88302 489_na     162_aa hypothetical protein
2625 JALCXO010000009.1 GCA_022689385.1_02625 CDS open 88865-89149 285_na     94_aa hypothetical protein