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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Parabacteroides merdae (GCA_022835275.1)

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PROKKA Annotations for GCA_022835275.1
Genome Selected: Parabacteroides merdae
ContigsBases CDSrRNA tmRNAtRNA
26 5199758 4488 18 1 80
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:10]    |    Number of Records Found: 4608 [10 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
4501 BQNZ01000009.1 GCA_022835275.1_04501 CDS open 45141-46001 861_na     286_aa map_2 Methionine aminopeptidase
4502 BQNZ01000009.1 GCA_022835275.1_04502 CDS open 46123-46545 423_na     140_aa mscL Large-conductance mechanosensitive channel
4503 BQNZ01000009.1 GCA_022835275.1_04503 CDS open 46698-47108 411_na     136_aa hcp Hydroxylamine reductase
4504 BQNZ01000010.1 GCA_022835275.1_04504 CDS open 27-602 576_na     191_aa hypothetical protein
4505 BQNZ01000010.1 GCA_022835275.1_04505 CDS open 723-1649 927_na     308_aa hypothetical protein
4506 BQNZ01000010.1 GCA_022835275.1_04506 CDS open 1761-5108 3348_na     1115_aa susC_9 TonB-dependent receptor SusC
4507 BQNZ01000010.1 GCA_022835275.1_04507 CDS open 5117-6967 1851_na     616_aa hypothetical protein
4508 BQNZ01000010.1 GCA_022835275.1_04508 CDS open 7014-7685 672_na     223_aa hypothetical protein
4509 BQNZ01000010.1 GCA_022835275.1_04509 CDS open 7748-8887 1140_na     379_aa 1%2C4-beta-mannosyl-N-acetylglucosamine phosphorylase
4510 BQNZ01000010.1 GCA_022835275.1_04510 CDS open 8899-11589 2691_na     896_aa csxA_3 Exo-beta-D-glucosaminidase
4511 BQNZ01000010.1 GCA_022835275.1_04511 CDS open 11613-12002 390_na     129_aa hypothetical protein
4512 BQNZ01000010.1 GCA_022835275.1_04512 CDS open 12038-13129 1092_na     363_aa cpdA_6 3%2C5-cyclic adenosine monophosphate phosphodiesterase CpdA
4513 BQNZ01000010.1 GCA_022835275.1_04513 CDS open 13139-14266 1128_na     375_aa cpdA_7 3%2C5-cyclic adenosine monophosphate phosphodiesterase CpdA
4514 BQNZ01000010.1 GCA_022835275.1_04514 CDS open 14263-15402 1140_na     379_aa hypothetical protein
4515 BQNZ01000010.1 GCA_022835275.1_04515 CDS open 15422-17113 1692_na     563_aa hypothetical protein
4516 BQNZ01000010.1 GCA_022835275.1_04516 CDS open 17161-18138 978_na     325_aa RBKS_2 Ribokinase
4517 BQNZ01000010.1 tRNA open 18247-18321 tRNA-Asn(gtt)
4518 BQNZ01000010.1 tRNA open 18358-18432 tRNA-Asn(gtt)
4519 BQNZ01000010.1 tRNA open 18467-18541 tRNA-Asn(gtt)
4520 BQNZ01000010.1 GCA_022835275.1_04520 CDS open 18664-19422 759_na     252_aa trmB tRNA (guanine-N(7)-)-methyltransferase
4521 BQNZ01000010.1 GCA_022835275.1_04521 CDS open 19454-20563 1110_na     369_aa Iron-sulfur cluster carrier protein
4522 BQNZ01000010.1 GCA_022835275.1_04522 CDS open 20694-22184 1491_na     496_aa hutH Histidine ammonia-lyase
4523 BQNZ01000010.1 GCA_022835275.1_04523 CDS open 22190-22825 636_na     211_aa fchA Methenyltetrahydrofolate cyclohydrolase
4524 BQNZ01000010.1 GCA_022835275.1_04524 CDS open 22867-24117 1251_na     416_aa hutI Imidazolonepropionase
4525 BQNZ01000010.1 GCA_022835275.1_04525 CDS open 24121-25026 906_na     301_aa Glutamate formimidoyltransferase
4526 BQNZ01000010.1 GCA_022835275.1_04526 CDS open 25023-27026 2004_na     667_aa hutU Urocanate hydratase
4527 BQNZ01000010.1 GCA_022835275.1_04527 CDS open 27202-30216 3015_na     1004_aa secD Protein translocase subunit SecD
4528 BQNZ01000010.1 GCA_022835275.1_04528 CDS open 30381-31382 1002_na     333_aa hypothetical protein
4529 BQNZ01000010.1 GCA_022835275.1_04529 CDS open 31384-31938 555_na     184_aa hypothetical protein
4530 BQNZ01000010.1 GCA_022835275.1_04530 CDS open 32024-33145 1122_na     373_aa hypothetical protein
4531 BQNZ01000010.1 GCA_022835275.1_04531 CDS open 33142-34020 879_na     292_aa hypothetical protein
4532 BQNZ01000010.1 GCA_022835275.1_04532 CDS open 34001-34711 711_na     236_aa hypothetical protein
4533 BQNZ01000010.1 GCA_022835275.1_04533 CDS open 34898-35170 273_na     90_aa hup_7 DNA-binding protein HU
4534 BQNZ01000010.1 GCA_022835275.1_04534 CDS open 35356-37149 1794_na     597_aa argS Arginine--tRNA ligase
4535 BQNZ01000010.1 GCA_022835275.1_04535 CDS open 37903-40248 2346_na     781_aa topA DNA topoisomerase 1
4536 BQNZ01000010.1 GCA_022835275.1_04536 CDS open 40398-40661 264_na     87_aa hypothetical protein
4537 BQNZ01000010.1 GCA_022835275.1_04537 CDS open 40730-41542 813_na     270_aa nagB_2 Glucosamine-6-phosphate deaminase
4538 BQNZ01000010.1 GCA_022835275.1_04538 CDS open 41617-42813 1197_na     398_aa norV Anaerobic nitric oxide reductase flavorubredoxin
4539 BQNZ01000010.1 GCA_022835275.1_04539 CDS open 42850-43683 834_na     277_aa lgt Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase
4540 BQNZ01000010.1 GCA_022835275.1_04540 CDS open 43779-44675 897_na     298_aa ddh Meso-diaminopimelate D-dehydrogenase
4541 BQNZ01000010.1 GCA_022835275.1_04541 CDS open 44836-45030 195_na     64_aa hypothetical protein
4542 BQNZ01000011.1 GCA_022835275.1_04542 CDS open 99-2906 2808_na     935_aa TonB-dependent receptor P3
4543 BQNZ01000011.1 GCA_022835275.1_04543 CDS open 2919-4619 1701_na     566_aa SusD-like protein P25
4544 BQNZ01000011.1 GCA_022835275.1_04544 CDS open 4699-6093 1395_na     464_aa thi4_2 Thiamine thiazole synthase
4545 BQNZ01000011.1 GCA_022835275.1_04545 CDS open 6134-8041 1908_na     635_aa hypothetical protein
4546 BQNZ01000011.1 GCA_022835275.1_04546 CDS open 8058-9917 1860_na     619_aa hypothetical protein
4547 BQNZ01000011.1 GCA_022835275.1_04547 CDS open 10039-11490 1452_na     483_aa hypothetical protein
4548 BQNZ01000011.1 GCA_022835275.1_04548 CDS open 11497-12345 849_na     282_aa hypothetical protein
4549 BQNZ01000011.1 GCA_022835275.1_04549 CDS open 12560-12808 249_na     82_aa hypothetical protein
4550 BQNZ01000011.1 GCA_022835275.1_04550 CDS open 12926-16879 3954_na     1317_aa hypothetical protein
4551 BQNZ01000011.1 GCA_022835275.1_04551 CDS open 16876-18036 1161_na     386_aa hypothetical protein
4552 BQNZ01000011.1 GCA_022835275.1_04552 CDS open 18266-20632 2367_na     788_aa hypothetical protein
4553 BQNZ01000011.1 GCA_022835275.1_04553 CDS open 20666-23038 2373_na     790_aa hypothetical protein
4554 BQNZ01000011.1 GCA_022835275.1_04554 CDS open 23218-23898 681_na     226_aa yknY_7 putative ABC transporter ATP-binding protein YknY
4555 BQNZ01000011.1 GCA_022835275.1_04555 CDS open 24021-26351 2331_na     776_aa hypothetical protein
4556 BQNZ01000011.1 GCA_022835275.1_04556 CDS open 26359-27210 852_na     283_aa hypothetical protein
4557 BQNZ01000011.1 GCA_022835275.1_04557 CDS open 27802-29571 1770_na     589_aa phoR Alkaline phosphatase synthesis sensor protein PhoR
4558 BQNZ01000011.1 GCA_022835275.1_04558 CDS open 29692-30378 687_na     228_aa walR_2 Transcriptional regulatory protein WalR
4559 BQNZ01000011.1 GCA_022835275.1_04559 CDS open 30483-31328 846_na     281_aa hisK Histidinol-phosphatase
4560 BQNZ01000011.1 GCA_022835275.1_04560 CDS open 31472-32662 1191_na     396_aa kbl 2-amino-3-ketobutyrate coenzyme A ligase
4561 BQNZ01000011.1 GCA_022835275.1_04561 CDS open 32702-32839 138_na     45_aa hypothetical protein
4562 BQNZ01000011.1 GCA_022835275.1_04562 CDS open 32903-33856 954_na     317_aa putative epimerasedehydratase
4563 BQNZ01000011.1 GCA_022835275.1_04563 CDS open 34315-35307 993_na     330_aa gpr L-glyceraldehyde 3-phosphate reductase
4564 BQNZ01000011.1 GCA_022835275.1_04564 CDS open 35348-38278 2931_na     976_aa addB ATP-dependent helicasedeoxyribonuclease subunit B
4565 BQNZ01000011.1 GCA_022835275.1_04565 CDS open 38284-38955 672_na     223_aa hypothetical protein
4566 BQNZ01000011.1 GCA_022835275.1_04566 CDS open 38973-39842 870_na     289_aa rhaS_6 HTH-type transcriptional activator RhaS
4567 BQNZ01000011.1 GCA_022835275.1_04567 CDS open 39966-41144 1179_na     392_aa araJ Putative transporter AraJ
4568 BQNZ01000012.1 GCA_022835275.1_04568 CDS open 139-774 636_na     211_aa hypothetical protein
4569 BQNZ01000012.1 GCA_022835275.1_04569 CDS open 957-3524 2568_na     855_aa hypothetical protein
4570 BQNZ01000012.1 GCA_022835275.1_04570 CDS open 3711-5747 2037_na     678_aa Putative beta-glucuronidase
4571 BQNZ01000012.1 GCA_022835275.1_04571 CDS open 5849-7399 1551_na     516_aa Endo-4-O-sulfatase
4572 BQNZ01000012.1 GCA_022835275.1_04572 CDS open 7389-8825 1437_na     478_aa Ulvan-active sulfatase
4573 BQNZ01000012.1 GCA_022835275.1_04573 CDS open 8923-10638 1716_na     571_aa SusD-like protein P2
4574 BQNZ01000012.1 GCA_022835275.1_04574 CDS open 10673-13876 3204_na     1067_aa TonB-dependent receptor P39
4575 BQNZ01000013.1 GCA_022835275.1_04575 CDS open 774-1751 978_na     325_aa hypothetical protein
4576 BQNZ01000013.1 GCA_022835275.1_04576 CDS open 2081-2623 543_na     180_aa hypothetical protein
4577 BQNZ01000013.1 GCA_022835275.1_04577 CDS open 2728-5145 2418_na     805_aa hypothetical protein
4578 BQNZ01000013.1 GCA_022835275.1_04578 CDS open 5235-5969 735_na     244_aa putative oxidoreductase
4579 BQNZ01000013.1 GCA_022835275.1_04579 CDS open 6036-7691 1656_na     551_aa yhdG putative amino acid permease YhdG
4580 BQNZ01000013.1 tRNA open 8013-8097 tRNA-Leu(gag)
4581 BQNZ01000013.1 tRNA open 8105-8188 tRNA-Leu(cag)
4582 BQNZ01000013.1 tRNA open 8239-8314 tRNA-Gly(gcc)
4583 BQNZ01000013.1 GCA_022835275.1_04583 CDS open 8414-9184 771_na     256_aa axe2 Acetylxylan esterase
4584 BQNZ01000013.1 GCA_022835275.1_04584 CDS open 9295-10179 885_na     294_aa hpr Hydroxypyruvate reductase
4585 BQNZ01000013.1 GCA_022835275.1_04585 CDS open 10162-10950 789_na     262_aa nadX L-aspartate dehydrogenase
4586 BQNZ01000014.1 GCA_022835275.1_04586 CDS open 101-1489 1389_na     462_aa dnaA Chromosomal replication initiator protein DnaA
4587 BQNZ01000014.1 GCA_022835275.1_04587 CDS open 1716-4286 2571_na     856_aa hypothetical protein
4588 BQNZ01000014.1 GCA_022835275.1_04588 CDS open 4392-7076 2685_na     894_aa hypothetical protein
4589 BQNZ01000014.1 GCA_022835275.1_04589 CDS open 7655-8008 354_na     117_aa hypothetical protein
4590 BQNZ01000014.1 GCA_022835275.1_04590 CDS open 8011-8280 270_na     89_aa hypothetical protein
4591 BQNZ01000014.1 GCA_022835275.1_04591 CDS open 8302-8745 444_na     147_aa rplI 50S ribosomal protein L9
4592 BQNZ01000014.1 GCA_022835275.1_04592 CDS open 8766-10079 1314_na     437_aa hypothetical protein
4593 BQNZ01000014.1 GCA_022835275.1_04593 CDS open 10117-11001 885_na     294_aa hypothetical protein
4594 BQNZ01000015.1 GCA_022835275.1_04594 CDS open 527-2581 2055_na     684_aa hypothetical protein
4595 BQNZ01000015.1 GCA_022835275.1_04595 CDS open 2586-4040 1455_na     484_aa hypothetical protein
4596 BQNZ01000015.1 GCA_022835275.1_04596 CDS open 4037-5797 1761_na     586_aa hypothetical protein
4597 BQNZ01000015.1 GCA_022835275.1_04597 CDS open 5998-7857 1860_na     619_aa hypothetical protein
4598 BQNZ01000015.1 GCA_022835275.1_04598 CDS open 7868-11119 3252_na     1083_aa TonB-dependent receptor P3
4599 BQNZ01000016.1 GCA_022835275.1_04599 CDS open 120-3278 3159_na     1052_aa TonB-dependent receptor P26
4600 BQNZ01000016.1 GCA_022835275.1_04600 CDS open 3306-5294 1989_na     662_aa hypothetical protein
4601 BQNZ01000017.1 GCA_022835275.1_04601 CDS open 5-2956 2952_na     983_aa TonB-dependent receptor P3
4602 BQNZ01000017.1 GCA_022835275.1_04602 CDS open 2978-4564 1587_na     528_aa hypothetical protein
4603 BQNZ01000017.1 GCA_022835275.1_04603 CDS open 4779-5948 1170_na     389_aa xerC_33 Tyrosine recombinase XerC
4604 BQNZ01000018.1 rRNA open 27-2895 23S ribosomal RNA
4605 BQNZ01000018.1 tRNA open 3049-3123 tRNA-Ala(tgc)
4606 BQNZ01000018.1 tRNA open 3134-3210 tRNA-Ile(gat)
4607 BQNZ01000018.1 rRNA open 3366-4892 16S ribosomal RNA
4608 BQNZ01000019.1 GCA_022835275.1_04608 CDS open 108-1454 1347_na     448_aa IS1380 family transposase IS616