HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Treponema pallidum (GCA_023016425.1)

Select a Genome:
PROKKA Annotations for GCA_023016425.1
Genome Selected: Treponema pallidum
ContigsBases CDSrRNA tmRNAtRNA
1 1139665 973 6 1 45
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 1027 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:3]    |    Number of Records Found: 1027 [3 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer
Range
(bp)
Show Sequences
(length) NA / AA
PROKKA
Gene
PROKKA
GeneProduct
1001 CP095418.1 GCA_023016425.1_01001 CDS open 1108010-1108435 426_na     141_aa nusB Transcription antitermination protein NusB
1002 CP095418.1 GCA_023016425.1_01002 CDS open 1108432-1109517 1086_na     361_aa surA Chaperone SurA
1003 CP095418.1 GCA_023016425.1_01003 CDS open 1109590-1111521 1932_na     643_aa hypothetical protein
1004 CP095418.1 GCA_023016425.1_01004 CDS open 1111579-1113093 1515_na     504_aa rny Ribonuclease Y
1005 CP095418.1 GCA_023016425.1_01005 CDS open 1113115-1113558 444_na     147_aa hypothetical protein
1006 CP095418.1 GCA_023016425.1_01006 CDS open 1113559-1115079 1521_na     506_aa gatA Glutamyl-tRNA(Gln) amidotransferase subunit A
1007 CP095418.1 GCA_023016425.1_01007 CDS open 1115072-1116601 1530_na     509_aa gatB Aspartylglutamyl-tRNA(AsnGln) amidotransferase subunit B
1008 CP095418.1 GCA_023016425.1_01008 CDS open 1116697-1118064 1368_na     455_aa radA DNA repair protein RadA
1009 CP095418.1 GCA_023016425.1_01009 CDS open 1118111-1118779 669_na     222_aa recX Regulatory protein RecX
1010 CP095418.1 GCA_023016425.1_01010 CDS open 1118733-1119122 390_na     129_aa rpsI 30S ribosomal protein S9
1011 CP095418.1 GCA_023016425.1_01011 CDS open 1119138-1119566 429_na     142_aa rplM 50S ribosomal protein L13
1012 CP095418.1 GCA_023016425.1_01012 CDS open 1119563-1119805 243_na     80_aa hypothetical protein
1013 CP095418.1 GCA_023016425.1_01013 CDS open 1119999-1121768 1770_na     589_aa hypothetical protein
1014 CP095418.1 GCA_023016425.1_01014 CDS open 1121791-1122666 876_na     291_aa udp Uridine phosphorylase
1015 CP095418.1 GCA_023016425.1_01015 CDS open 1122682-1124739 2058_na     685_aa pcrA_2 ATP-dependent DNA helicase PcrA
1016 CP095418.1 GCA_023016425.1_01016 CDS open 1124777-1125463 687_na     228_aa deaD_2 ATP-dependent RNA helicase DeaD
1017 CP095418.1 GCA_023016425.1_01017 CDS open 1125723-1127552 1830_na     609_aa hypothetical protein
1018 CP095418.1 GCA_023016425.1_01018 CDS open 1127620-1128054 435_na     144_aa hypothetical protein
1019 CP095418.1 GCA_023016425.1_01019 CDS open 1128066-1129001 936_na     311_aa hypothetical protein
1020 CP095418.1 GCA_023016425.1_01020 CDS open 1129075-1130100 1026_na     341_aa yrbG Inner membrane protein YrbG
1021 CP095418.1 GCA_023016425.1_01021 CDS open 1130097-1133051 2955_na     984_aa valS Valine--tRNA ligase
1022 CP095418.1 GCA_023016425.1_01022 CDS open 1133120-1135498 2379_na     792_aa actP Copper-transporting P-type ATPase
1023 CP095418.1 GCA_023016425.1_01023 CDS open 1135588-1136304 717_na     238_aa hypothetical protein
1024 CP095418.1 GCA_023016425.1_01024 CDS open 1136463-1136996 534_na     177_aa tpf1 Antigen TpF1
1025 CP095418.1 GCA_023016425.1_01025 CDS open 1137223-1137795 573_na     190_aa apt Adenine phosphoribosyltransferase
1026 CP095418.1 GCA_023016425.1_01026 CDS open 1137818-1138873 1056_na     351_aa epmA Elongation factor P--(R)-beta-lysine ligase
1027 CP095418.1 GCA_023016425.1_01027 CDS open 1138873-1139472 600_na     199_aa clpP_2 ATP-dependent Clp protease proteolytic subunit