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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_024104395.1)

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PROKKA Annotations for GCA_024104395.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
40 2623763 2448 8 1 58
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Annotation Table [page:6]    |    Number of Records Found: 2605 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JAHAVE010000008.1 GCA_024104395.1_02501 CDS open 85919-86857 939_na     312_aa yhaM 3-5 exoribonuclease YhaM
2502 JAHAVE010000008.1 GCA_024104395.1_02502 CDS open 86857-89790 2934_na     977_aa hypothetical protein
2503 JAHAVE010000008.1 GCA_024104395.1_02503 CDS open 89780-90976 1197_na     398_aa hypothetical protein
2504 JAHAVE010000008.1 GCA_024104395.1_02504 CDS open 91155-91499 345_na     114_aa hypothetical protein
2505 JAHAVE010000008.1 GCA_024104395.1_02505 CDS open 91565-92683 1119_na     372_aa hypothetical protein
2506 JAHAVE010000009.1 tRNA open 130-201 tRNA-Gly(tcc)
2507 JAHAVE010000009.1 tRNA open 218-303 tRNA-Leu(gag)
2508 JAHAVE010000009.1 GCA_024104395.1_02508 CDS open 611-1069 459_na     152_aa Protein SprT-like protein
2509 JAHAVE010000009.1 GCA_024104395.1_02509 CDS open 1062-3212 2151_na     716_aa yhgF Protein YhgF
2510 JAHAVE010000009.1 GCA_024104395.1_02510 CDS open 3331-4101 771_na     256_aa sigB RNA polymerase sigma-B factor
2511 JAHAVE010000009.1 GCA_024104395.1_02511 CDS open 4076-4555 480_na     159_aa rsbW Serine-protein kinase RsbW
2512 JAHAVE010000009.1 GCA_024104395.1_02512 CDS open 4557-4883 327_na     108_aa rsbV Anti-sigma-B factor antagonist
2513 JAHAVE010000009.1 GCA_024104395.1_02513 CDS open 4974-5975 1002_na     333_aa rsbU Phosphoserine phosphatase RsbU
2514 JAHAVE010000009.1 GCA_024104395.1_02514 CDS open 6409-6759 351_na     116_aa mazF Endoribonuclease MazF
2515 JAHAVE010000009.1 GCA_024104395.1_02515 CDS open 6756-6926 171_na     56_aa mazE Antitoxin MazE
2516 JAHAVE010000009.1 GCA_024104395.1_02516 CDS open 7013-8161 1149_na     382_aa alr1 Alanine racemase 1
2517 JAHAVE010000009.1 GCA_024104395.1_02517 CDS open 8209-8601 393_na     130_aa acpS Holo-[acyl-carrier-protein] synthase
2518 JAHAVE010000009.1 GCA_024104395.1_02518 CDS open 8613-9125 513_na     170_aa hypothetical protein
2519 JAHAVE010000009.1 GCA_024104395.1_02519 CDS open 9112-10626 1515_na     504_aa hypothetical protein
2520 JAHAVE010000009.1 GCA_024104395.1_02520 CDS open 10619-11101 483_na     160_aa hypothetical protein
2521 JAHAVE010000009.1 GCA_024104395.1_02521 CDS open 11426-12940 1515_na     504_aa cshA DEAD-box ATP-dependent RNA helicase CshA
2522 JAHAVE010000009.1 GCA_024104395.1_02522 CDS open 13175-14533 1359_na     452_aa murF_2 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
2523 JAHAVE010000009.1 GCA_024104395.1_02523 CDS open 14551-15621 1071_na     356_aa ddl D-alanine--D-alanine ligase
2524 JAHAVE010000009.1 GCA_024104395.1_02524 CDS open 15977-17167 1191_na     396_aa rodA Peptidoglycan glycosyltransferase RodA
2525 JAHAVE010000009.1 GCA_024104395.1_02525 CDS open 17581-17718 138_na     45_aa hypothetical protein
2526 JAHAVE010000009.1 GCA_024104395.1_02526 CDS open 17809-18021 213_na     70_aa hypothetical protein
2527 JAHAVE010000009.1 GCA_024104395.1_02527 CDS open 18034-18327 294_na     97_aa csoR Copper-sensing transcriptional repressor CsoR
2528 JAHAVE010000009.1 GCA_024104395.1_02528 CDS open 18493-19977 1485_na     494_aa cls_2 Cardiolipin synthase
2529 JAHAVE010000009.1 GCA_024104395.1_02529 CDS open 20099-20740 642_na     213_aa yedJ putative protein YedJ
2530 JAHAVE010000009.1 GCA_024104395.1_02530 CDS open 21124-21999 876_na     291_aa yidC_3 Membrane protein insertase YidC
2531 JAHAVE010000009.1 GCA_024104395.1_02531 CDS open 22089-22727 639_na     212_aa thiE Thiamine-phosphate synthase
2532 JAHAVE010000009.1 GCA_024104395.1_02532 CDS open 22730-23518 789_na     262_aa thiM Hydroxyethylthiazole kinase
2533 JAHAVE010000009.1 GCA_024104395.1_02533 CDS open 23511-24332 822_na     273_aa thiD Hydroxymethylpyrimidinephosphomethylpyrimidine kinase
2534 JAHAVE010000009.1 GCA_024104395.1_02534 CDS open 24337-25014 678_na     225_aa tenA Aminopyrimidine aminohydrolase
2535 JAHAVE010000009.1 misc_RNA open 25101-25204 TPP
2536 JAHAVE010000009.1 GCA_024104395.1_02536 CDS open 25427-26134 708_na     235_aa sceD putative transglycosylase SceD
2537 JAHAVE010000009.1 GCA_024104395.1_02537 CDS open 26613-27014 402_na     133_aa Single-stranded DNA-binding protein
2538 JAHAVE010000009.1 GCA_024104395.1_02538 CDS open 27203-27655 453_na     150_aa hypothetical protein
2539 JAHAVE010000009.1 GCA_024104395.1_02539 CDS open 28052-28492 441_na     146_aa fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
2540 JAHAVE010000009.1 GCA_024104395.1_02540 CDS open 28529-29794 1266_na     421_aa murA1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
2541 JAHAVE010000009.1 GCA_024104395.1_02541 CDS open 29958-30191 234_na     77_aa hypothetical protein
2542 JAHAVE010000009.1 GCA_024104395.1_02542 CDS open 30329-30730 402_na     133_aa atpC ATP synthase epsilon chain
2543 JAHAVE010000009.1 GCA_024104395.1_02543 CDS open 30752-32164 1413_na     470_aa atpD ATP synthase subunit beta
2544 JAHAVE010000009.1 GCA_024104395.1_02544 CDS open 32186-33052 867_na     288_aa atpG ATP synthase gamma chain
2545 JAHAVE010000009.1 GCA_024104395.1_02545 CDS open 33084-34592 1509_na     502_aa atpA ATP synthase subunit alpha
2546 JAHAVE010000009.1 GCA_024104395.1_02546 CDS open 34612-35151 540_na     179_aa atpH ATP synthase subunit delta
2547 JAHAVE010000009.1 GCA_024104395.1_02547 CDS open 35151-35675 525_na     174_aa atpF ATP synthase subunit b
2548 JAHAVE010000009.1 GCA_024104395.1_02548 CDS open 35767-35979 213_na     70_aa atpE ATP synthase subunit c
2549 JAHAVE010000009.1 GCA_024104395.1_02549 CDS open 36011-36739 729_na     242_aa atpB ATP synthase subunit a
2550 JAHAVE010000009.1 GCA_024104395.1_02550 CDS open 36766-37116 351_na     116_aa hypothetical protein
2551 JAHAVE010000009.1 GCA_024104395.1_02551 CDS open 37397-38026 630_na     209_aa upp Uracil phosphoribosyltransferase
2552 JAHAVE010000009.1 GCA_024104395.1_02552 CDS open 38104-39285 1182_na     393_aa glyA Serine hydroxymethyltransferase
2553 JAHAVE010000009.1 GCA_024104395.1_02553 CDS open 39308-39832 525_na     174_aa hypothetical protein
2554 JAHAVE010000009.1 GCA_024104395.1_02554 CDS open 39941-40363 423_na     140_aa ptpB Low molecular weight protein-tyrosine-phosphatase PtpB
2555 JAHAVE010000009.1 GCA_024104395.1_02555 CDS open 40369-41403 1035_na     344_aa ywlC Threonylcarbamoyl-AMP synthase
2556 JAHAVE010000009.1 GCA_024104395.1_02556 CDS open 41491-42330 840_na     279_aa prmC Release factor glutamine methyltransferase
2557 JAHAVE010000009.1 GCA_024104395.1_02557 CDS open 42317-43393 1077_na     358_aa prfA Peptide chain release factor 1
2558 JAHAVE010000009.1 GCA_024104395.1_02558 CDS open 43393-43992 600_na     199_aa tdk Thymidine kinase
2559 JAHAVE010000009.1 GCA_024104395.1_02559 CDS open 44192-44449 258_na     85_aa rpmE2 50S ribosomal protein L31 type B
2560 JAHAVE010000009.1 GCA_024104395.1_02560 CDS open 44566-45882 1317_na     438_aa rho Transcription termination factor Rho
2561 JAHAVE010000009.1 GCA_024104395.1_02561 CDS open 46072-47499 1428_na     475_aa Putative aldehyde dehydrogenase
2562 JAHAVE010000009.1 GCA_024104395.1_02562 CDS open 47748-48080 333_na     110_aa yodB HTH-type transcriptional regulator YodB
2563 JAHAVE010000009.1 GCA_024104395.1_02563 CDS open 48212-49480 1269_na     422_aa murA2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2
2564 JAHAVE010000009.1 GCA_024104395.1_02564 CDS open 49748-50605 858_na     285_aa fba Fructose-bisphosphate aldolase
2565 JAHAVE010000009.1 GCA_024104395.1_02565 CDS open 50810-51331 522_na     173_aa hypothetical protein
2566 JAHAVE010000009.1 GCA_024104395.1_02566 CDS open 51379-52986 1608_na     535_aa pyrG CTP synthase
2567 JAHAVE010000009.1 misc_RNA open 53148-53217 tsr31
2568 JAHAVE010000009.1 GCA_024104395.1_02568 CDS open 53309-53830 522_na     173_aa rpoE putative DNA-directed RNA polymerase subunit delta
2569 JAHAVE010000009.1 GCA_024104395.1_02569 CDS open 53941-54801 861_na     286_aa hypothetical protein
2570 JAHAVE010000009.1 GCA_024104395.1_02570 CDS open 54959-55759 801_na     266_aa coaW Type II pantothenate kinase
2571 JAHAVE010000009.1 GCA_024104395.1_02571 CDS open 55807-56472 666_na     221_aa hypothetical protein
2572 JAHAVE010000009.1 GCA_024104395.1_02572 CDS open 56734-57924 1191_na     396_aa hypothetical protein
2573 JAHAVE010000009.1 GCA_024104395.1_02573 CDS open 57924-59108 1185_na     394_aa N-acetyldiaminopimelate deacetylase
2574 JAHAVE010000009.1 GCA_024104395.1_02574 CDS open 59363-59833 471_na     156_aa luxS S-ribosylhomocysteine lyase
2575 JAHAVE010000009.1 GCA_024104395.1_02575 CDS open 60238-60399 162_na     53_aa hypothetical protein
2576 JAHAVE010000009.1 GCA_024104395.1_02576 CDS open 60411-62405 1995_na     664_aa feoB Fe(2+) transporter FeoB
2577 JAHAVE010000009.1 GCA_024104395.1_02577 CDS open 62415-62639 225_na     74_aa hypothetical protein
2578 JAHAVE010000009.1 GCA_024104395.1_02578 CDS open 63261-63611 351_na     116_aa hypothetical protein
2579 JAHAVE010000009.1 GCA_024104395.1_02579 CDS open 63611-64798 1188_na     395_aa deoB Phosphopentomutase
2580 JAHAVE010000009.1 GCA_024104395.1_02580 CDS open 64809-66110 1302_na     433_aa pdp Pyrimidine-nucleoside phosphorylase
2581 JAHAVE010000009.1 GCA_024104395.1_02581 CDS open 66171-66833 663_na     220_aa deoC1 Deoxyribose-phosphate aldolase 1
2582 JAHAVE010000009.1 GCA_024104395.1_02582 CDS open 67012-67722 711_na     236_aa deoD Purine nucleoside phosphorylase DeoD-type
2583 JAHAVE010000009.1 GCA_024104395.1_02583 CDS open 67800-68246 447_na     148_aa dps General stress protein 20U
2584 JAHAVE010000009.1 GCA_024104395.1_02584 CDS open 68447-68857 411_na     136_aa hypothetical protein
2585 JAHAVE010000009.1 GCA_024104395.1_02585 CDS open 69108-70484 1377_na     458_aa hypothetical protein
2586 JAHAVE010000009.1 GCA_024104395.1_02586 CDS open 70735-70968 234_na     77_aa hypothetical protein
2587 JAHAVE010000009.1 GCA_024104395.1_02587 CDS open 71008-71946 939_na     312_aa gmuF putative mannose-6-phosphate isomerase GmuF
2588 JAHAVE010000009.1 GCA_024104395.1_02588 CDS open 72232-72891 660_na     219_aa yhfK putative sugar epimerase YhfK
2589 JAHAVE010000009.1 GCA_024104395.1_02589 CDS open 73046-73369 324_na     107_aa czrA HTH-type transcriptional repressor CzrA
2590 JAHAVE010000009.1 GCA_024104395.1_02590 CDS open 73362-74330 969_na     322_aa czcD_2 Cadmium%2C cobalt and zincH(+)-K(+) antiporter
2591 JAHAVE010000009.1 GCA_024104395.1_02591 CDS open 74384-75115 732_na     243_aa hypothetical protein
2592 JAHAVE010000009.1 GCA_024104395.1_02592 CDS open 75248-76321 1074_na     357_aa hypothetical protein
2593 JAHAVE010000009.1 misc_RNA open 76390-76668 tsr24
2594 JAHAVE010000009.1 GCA_024104395.1_02594 CDS open 76658-76762 105_na     34_aa hypothetical protein
2595 JAHAVE010000009.1 GCA_024104395.1_02595 CDS open 76803-77654 852_na     283_aa yidA Sugar phosphatase YidA
2596 JAHAVE010000009.1 GCA_024104395.1_02596 CDS open 77923-79728 1806_na     601_aa glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
2597 JAHAVE010000009.1 misc_RNA open 79926-80141 glmS
2598 JAHAVE010000009.1 GCA_024104395.1_02598 CDS open 80467-81822 1356_na     451_aa glmM Phosphoglucosamine mutase
2599 JAHAVE010000009.1 GCA_024104395.1_02599 CDS open 81846-82778 933_na     310_aa cdaR CdaA regulatory protein CdaR
2600 JAHAVE010000009.1 GCA_024104395.1_02600 CDS open 82780-83586 807_na     268_aa cdaA Cyclic di-AMP synthase CdaA
2601 JAHAVE010000009.1 tRNA open 83723-83795 tRNA-Lys(ttt)
2602 JAHAVE010000009.1 tRNA open 83799-83873 tRNA-Gln(ttg)
2603 JAHAVE010000009.1 tRNA open 83879-83962 tRNA-Tyr(gta)
2604 JAHAVE010000009.1 tRNA open 83978-84053 tRNA-Val(tac)
2605 JAHAVE010000009.1 tRNA open 84062-84135 tRNA-Glu(ttc)