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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_024104505.1)

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PROKKA Annotations for GCA_024104505.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
38 2624890 2450 8 1 57
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Annotation Table [page:6]    |    Number of Records Found: 2606 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JAHAVK010000008.1 GCA_024104505.1_02501 CDS open 103506-105242 1737_na     578_aa Putative multidrug export ATP-bindingpermease protein
2502 JAHAVK010000008.1 GCA_024104505.1_02502 CDS open 105397-106491 1095_na     364_aa hypothetical protein
2503 JAHAVK010000008.1 GCA_024104505.1_02503 CDS open 106568-107857 1290_na     429_aa hemL2 Glutamate-1-semialdehyde 2%2C1-aminomutase 2
2504 JAHAVK010000008.1 GCA_024104505.1_02504 CDS open 107939-108394 456_na     151_aa bcp Putative peroxiredoxin bcp
2505 JAHAVK010000008.1 GCA_024104505.1_02505 CDS open 108424-109350 927_na     308_aa ghrB_2 Glyoxylatehydroxypyruvate reductase B
2506 JAHAVK010000008.1 GCA_024104505.1_02506 CDS open 109447-109905 459_na     152_aa perR Peroxide-responsive repressor PerR
2507 JAHAVK010000009.1 tRNA open 175-246 tRNA-Gly(tcc)
2508 JAHAVK010000009.1 tRNA open 263-348 tRNA-Leu(gag)
2509 JAHAVK010000009.1 GCA_024104505.1_02509 CDS open 656-1114 459_na     152_aa Protein SprT-like protein
2510 JAHAVK010000009.1 GCA_024104505.1_02510 CDS open 1107-3257 2151_na     716_aa yhgF Protein YhgF
2511 JAHAVK010000009.1 GCA_024104505.1_02511 CDS open 3376-4146 771_na     256_aa sigB RNA polymerase sigma-B factor
2512 JAHAVK010000009.1 GCA_024104505.1_02512 CDS open 4121-4600 480_na     159_aa rsbW Serine-protein kinase RsbW
2513 JAHAVK010000009.1 GCA_024104505.1_02513 CDS open 4602-4928 327_na     108_aa rsbV Anti-sigma-B factor antagonist
2514 JAHAVK010000009.1 GCA_024104505.1_02514 CDS open 5019-6020 1002_na     333_aa rsbU Phosphoserine phosphatase RsbU
2515 JAHAVK010000009.1 GCA_024104505.1_02515 CDS open 6454-6804 351_na     116_aa mazF Endoribonuclease MazF
2516 JAHAVK010000009.1 GCA_024104505.1_02516 CDS open 6801-6971 171_na     56_aa mazE Antitoxin MazE
2517 JAHAVK010000009.1 GCA_024104505.1_02517 CDS open 7058-8206 1149_na     382_aa alr1 Alanine racemase 1
2518 JAHAVK010000009.1 GCA_024104505.1_02518 CDS open 8254-8646 393_na     130_aa acpS Holo-[acyl-carrier-protein] synthase
2519 JAHAVK010000009.1 GCA_024104505.1_02519 CDS open 8658-9170 513_na     170_aa hypothetical protein
2520 JAHAVK010000009.1 GCA_024104505.1_02520 CDS open 9157-10671 1515_na     504_aa hypothetical protein
2521 JAHAVK010000009.1 GCA_024104505.1_02521 CDS open 10664-11146 483_na     160_aa hypothetical protein
2522 JAHAVK010000009.1 GCA_024104505.1_02522 CDS open 11471-12985 1515_na     504_aa cshA DEAD-box ATP-dependent RNA helicase CshA
2523 JAHAVK010000009.1 GCA_024104505.1_02523 CDS open 13220-14578 1359_na     452_aa murF_2 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
2524 JAHAVK010000009.1 GCA_024104505.1_02524 CDS open 14596-15666 1071_na     356_aa ddl D-alanine--D-alanine ligase
2525 JAHAVK010000009.1 GCA_024104505.1_02525 CDS open 16022-17212 1191_na     396_aa rodA Peptidoglycan glycosyltransferase RodA
2526 JAHAVK010000009.1 GCA_024104505.1_02526 CDS open 17626-17763 138_na     45_aa hypothetical protein
2527 JAHAVK010000009.1 GCA_024104505.1_02527 CDS open 17854-18066 213_na     70_aa hypothetical protein
2528 JAHAVK010000009.1 GCA_024104505.1_02528 CDS open 18079-18372 294_na     97_aa csoR Copper-sensing transcriptional repressor CsoR
2529 JAHAVK010000009.1 GCA_024104505.1_02529 CDS open 18538-20022 1485_na     494_aa cls_2 Cardiolipin synthase
2530 JAHAVK010000009.1 GCA_024104505.1_02530 CDS open 20144-20785 642_na     213_aa yedJ putative protein YedJ
2531 JAHAVK010000009.1 GCA_024104505.1_02531 CDS open 21169-22044 876_na     291_aa yidC_3 Membrane protein insertase YidC
2532 JAHAVK010000009.1 GCA_024104505.1_02532 CDS open 22134-22772 639_na     212_aa thiE Thiamine-phosphate synthase
2533 JAHAVK010000009.1 GCA_024104505.1_02533 CDS open 22775-23563 789_na     262_aa thiM Hydroxyethylthiazole kinase
2534 JAHAVK010000009.1 GCA_024104505.1_02534 CDS open 23556-24377 822_na     273_aa thiD Hydroxymethylpyrimidinephosphomethylpyrimidine kinase
2535 JAHAVK010000009.1 GCA_024104505.1_02535 CDS open 24382-25059 678_na     225_aa tenA Aminopyrimidine aminohydrolase
2536 JAHAVK010000009.1 misc_RNA open 25146-25249 TPP
2537 JAHAVK010000009.1 GCA_024104505.1_02537 CDS open 25472-26179 708_na     235_aa sceD putative transglycosylase SceD
2538 JAHAVK010000009.1 GCA_024104505.1_02538 CDS open 26658-27059 402_na     133_aa Single-stranded DNA-binding protein
2539 JAHAVK010000009.1 GCA_024104505.1_02539 CDS open 27248-27700 453_na     150_aa hypothetical protein
2540 JAHAVK010000009.1 GCA_024104505.1_02540 CDS open 28097-28537 441_na     146_aa fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
2541 JAHAVK010000009.1 GCA_024104505.1_02541 CDS open 28574-29839 1266_na     421_aa murA1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
2542 JAHAVK010000009.1 GCA_024104505.1_02542 CDS open 30003-30236 234_na     77_aa hypothetical protein
2543 JAHAVK010000009.1 GCA_024104505.1_02543 CDS open 30374-30775 402_na     133_aa atpC ATP synthase epsilon chain
2544 JAHAVK010000009.1 GCA_024104505.1_02544 CDS open 30797-32209 1413_na     470_aa atpD ATP synthase subunit beta
2545 JAHAVK010000009.1 GCA_024104505.1_02545 CDS open 32231-33097 867_na     288_aa atpG ATP synthase gamma chain
2546 JAHAVK010000009.1 GCA_024104505.1_02546 CDS open 33129-34637 1509_na     502_aa atpA ATP synthase subunit alpha
2547 JAHAVK010000009.1 GCA_024104505.1_02547 CDS open 34657-35196 540_na     179_aa atpH ATP synthase subunit delta
2548 JAHAVK010000009.1 GCA_024104505.1_02548 CDS open 35196-35720 525_na     174_aa atpF ATP synthase subunit b
2549 JAHAVK010000009.1 GCA_024104505.1_02549 CDS open 35812-36024 213_na     70_aa atpE ATP synthase subunit c
2550 JAHAVK010000009.1 GCA_024104505.1_02550 CDS open 36056-36784 729_na     242_aa atpB ATP synthase subunit a
2551 JAHAVK010000009.1 GCA_024104505.1_02551 CDS open 36811-37161 351_na     116_aa hypothetical protein
2552 JAHAVK010000009.1 GCA_024104505.1_02552 CDS open 37442-38071 630_na     209_aa upp Uracil phosphoribosyltransferase
2553 JAHAVK010000009.1 GCA_024104505.1_02553 CDS open 38149-39330 1182_na     393_aa glyA Serine hydroxymethyltransferase
2554 JAHAVK010000009.1 GCA_024104505.1_02554 CDS open 39353-39877 525_na     174_aa hypothetical protein
2555 JAHAVK010000009.1 GCA_024104505.1_02555 CDS open 39986-40408 423_na     140_aa ptpB Low molecular weight protein-tyrosine-phosphatase PtpB
2556 JAHAVK010000009.1 GCA_024104505.1_02556 CDS open 40414-41448 1035_na     344_aa ywlC Threonylcarbamoyl-AMP synthase
2557 JAHAVK010000009.1 GCA_024104505.1_02557 CDS open 41536-42375 840_na     279_aa prmC Release factor glutamine methyltransferase
2558 JAHAVK010000009.1 GCA_024104505.1_02558 CDS open 42362-43438 1077_na     358_aa prfA Peptide chain release factor 1
2559 JAHAVK010000009.1 GCA_024104505.1_02559 CDS open 43438-44037 600_na     199_aa tdk Thymidine kinase
2560 JAHAVK010000009.1 GCA_024104505.1_02560 CDS open 44237-44494 258_na     85_aa rpmE2 50S ribosomal protein L31 type B
2561 JAHAVK010000009.1 GCA_024104505.1_02561 CDS open 44611-45927 1317_na     438_aa rho Transcription termination factor Rho
2562 JAHAVK010000009.1 GCA_024104505.1_02562 CDS open 46117-47544 1428_na     475_aa Putative aldehyde dehydrogenase
2563 JAHAVK010000009.1 GCA_024104505.1_02563 CDS open 47793-48125 333_na     110_aa yodB HTH-type transcriptional regulator YodB
2564 JAHAVK010000009.1 GCA_024104505.1_02564 CDS open 48257-49525 1269_na     422_aa murA2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2
2565 JAHAVK010000009.1 GCA_024104505.1_02565 CDS open 49793-50650 858_na     285_aa fba Fructose-bisphosphate aldolase
2566 JAHAVK010000009.1 GCA_024104505.1_02566 CDS open 50855-51376 522_na     173_aa hypothetical protein
2567 JAHAVK010000009.1 GCA_024104505.1_02567 CDS open 51424-53031 1608_na     535_aa pyrG CTP synthase
2568 JAHAVK010000009.1 misc_RNA open 53193-53262 tsr31
2569 JAHAVK010000009.1 GCA_024104505.1_02569 CDS open 53354-53875 522_na     173_aa rpoE putative DNA-directed RNA polymerase subunit delta
2570 JAHAVK010000009.1 GCA_024104505.1_02570 CDS open 53986-54846 861_na     286_aa hypothetical protein
2571 JAHAVK010000009.1 GCA_024104505.1_02571 CDS open 55004-55804 801_na     266_aa coaW Type II pantothenate kinase
2572 JAHAVK010000009.1 GCA_024104505.1_02572 CDS open 55852-56517 666_na     221_aa hypothetical protein
2573 JAHAVK010000009.1 GCA_024104505.1_02573 CDS open 56779-57969 1191_na     396_aa hypothetical protein
2574 JAHAVK010000009.1 GCA_024104505.1_02574 CDS open 57969-59153 1185_na     394_aa N-acetyldiaminopimelate deacetylase
2575 JAHAVK010000009.1 GCA_024104505.1_02575 CDS open 59408-59878 471_na     156_aa luxS S-ribosylhomocysteine lyase
2576 JAHAVK010000009.1 GCA_024104505.1_02576 CDS open 60283-60444 162_na     53_aa hypothetical protein
2577 JAHAVK010000009.1 GCA_024104505.1_02577 CDS open 60456-62450 1995_na     664_aa feoB Fe(2+) transporter FeoB
2578 JAHAVK010000009.1 GCA_024104505.1_02578 CDS open 62460-62684 225_na     74_aa hypothetical protein
2579 JAHAVK010000009.1 GCA_024104505.1_02579 CDS open 63306-63656 351_na     116_aa hypothetical protein
2580 JAHAVK010000009.1 GCA_024104505.1_02580 CDS open 63656-64843 1188_na     395_aa deoB Phosphopentomutase
2581 JAHAVK010000009.1 GCA_024104505.1_02581 CDS open 64854-66155 1302_na     433_aa pdp Pyrimidine-nucleoside phosphorylase
2582 JAHAVK010000009.1 GCA_024104505.1_02582 CDS open 66216-66878 663_na     220_aa deoC1 Deoxyribose-phosphate aldolase 1
2583 JAHAVK010000009.1 GCA_024104505.1_02583 CDS open 67057-67767 711_na     236_aa deoD Purine nucleoside phosphorylase DeoD-type
2584 JAHAVK010000009.1 GCA_024104505.1_02584 CDS open 67845-68291 447_na     148_aa dps General stress protein 20U
2585 JAHAVK010000009.1 GCA_024104505.1_02585 CDS open 68492-68902 411_na     136_aa hypothetical protein
2586 JAHAVK010000009.1 GCA_024104505.1_02586 CDS open 69153-70529 1377_na     458_aa hypothetical protein
2587 JAHAVK010000009.1 GCA_024104505.1_02587 CDS open 70780-71013 234_na     77_aa hypothetical protein
2588 JAHAVK010000009.1 GCA_024104505.1_02588 CDS open 71053-71991 939_na     312_aa gmuF putative mannose-6-phosphate isomerase GmuF
2589 JAHAVK010000009.1 GCA_024104505.1_02589 CDS open 72277-72936 660_na     219_aa yhfK putative sugar epimerase YhfK
2590 JAHAVK010000009.1 GCA_024104505.1_02590 CDS open 73091-73414 324_na     107_aa czrA HTH-type transcriptional repressor CzrA
2591 JAHAVK010000009.1 GCA_024104505.1_02591 CDS open 73407-74375 969_na     322_aa czcD_2 Cadmium%2C cobalt and zincH(+)-K(+) antiporter
2592 JAHAVK010000009.1 GCA_024104505.1_02592 CDS open 74429-75160 732_na     243_aa hypothetical protein
2593 JAHAVK010000009.1 GCA_024104505.1_02593 CDS open 75293-76366 1074_na     357_aa hypothetical protein
2594 JAHAVK010000009.1 misc_RNA open 76435-76713 tsr24
2595 JAHAVK010000009.1 GCA_024104505.1_02595 CDS open 76703-76807 105_na     34_aa hypothetical protein
2596 JAHAVK010000009.1 GCA_024104505.1_02596 CDS open 76848-77699 852_na     283_aa yidA Sugar phosphatase YidA
2597 JAHAVK010000009.1 GCA_024104505.1_02597 CDS open 77968-79773 1806_na     601_aa glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
2598 JAHAVK010000009.1 misc_RNA open 79971-80186 glmS
2599 JAHAVK010000009.1 GCA_024104505.1_02599 CDS open 80512-81867 1356_na     451_aa glmM Phosphoglucosamine mutase
2600 JAHAVK010000009.1 GCA_024104505.1_02600 CDS open 81891-82823 933_na     310_aa cdaR CdaA regulatory protein CdaR
2601 JAHAVK010000009.1 GCA_024104505.1_02601 CDS open 82825-83631 807_na     268_aa cdaA Cyclic di-AMP synthase CdaA
2602 JAHAVK010000009.1 tRNA open 83768-83840 tRNA-Lys(ttt)
2603 JAHAVK010000009.1 tRNA open 83844-83918 tRNA-Gln(ttg)
2604 JAHAVK010000009.1 tRNA open 83924-84007 tRNA-Tyr(gta)
2605 JAHAVK010000009.1 tRNA open 84023-84098 tRNA-Val(tac)
2606 JAHAVK010000009.1 tRNA open 84107-84180 tRNA-Glu(ttc)