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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Prevotella copri (GCA_024330875.1)

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PROKKA Annotations for GCA_024330875.1
Genome Selected: Prevotella copri
ContigsBases CDSrRNA tmRNAtRNA
86 3675783 3053 8 1 71
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Annotation Table [page:7]    |    Number of Records Found: 3148 [7 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
3001 JANDXB010000008.1 GCA_024330875.1_03001 CDS open 45863-46912 1050_na     349_aa hypothetical protein
3002 JANDXB010000008.1 GCA_024330875.1_03002 CDS open 46933-48486 1554_na     517_aa hypothetical protein
3003 JANDXB010000008.1 GCA_024330875.1_03003 CDS open 48502-49557 1056_na     351_aa hypothetical protein
3004 JANDXB010000008.1 GCA_024330875.1_03004 CDS open 49571-50722 1152_na     383_aa hypothetical protein
3005 JANDXB010000008.1 GCA_024330875.1_03005 CDS open 50724-51539 816_na     271_aa hypothetical protein
3006 JANDXB010000008.1 GCA_024330875.1_03006 CDS open 51547-52368 822_na     273_aa hypothetical protein
3007 JANDXB010000008.1 GCA_024330875.1_03007 CDS open 52435-53244 810_na     269_aa tuaG Putative teichuronic acid biosynthesis glycosyltransferase TuaG
3008 JANDXB010000008.1 GCA_024330875.1_03008 CDS open 53301-53936 636_na     211_aa wecA_2 UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase
3009 JANDXB010000008.1 GCA_024330875.1_03009 CDS open 54035-55309 1275_na     424_aa hypothetical protein
3010 JANDXB010000008.1 GCA_024330875.1_03010 CDS open 55341-58532 3192_na     1063_aa czcA Cobalt-zinc-cadmium resistance protein CzcA
3011 JANDXB010000008.1 GCA_024330875.1_03011 CDS open 58574-59821 1248_na     415_aa czcB Cobalt-zinc-cadmium resistance protein CzcB
3012 JANDXB010000008.1 GCA_024330875.1_03012 CDS open 59978-60445 468_na     155_aa hypothetical protein
3013 JANDXB010000008.1 GCA_024330875.1_03013 CDS open 60574-62649 2076_na     691_aa dsbD Thiol:disulfide interchange protein DsbD
3014 JANDXB010000008.1 GCA_024330875.1_03014 CDS open 62764-64068 1305_na     434_aa yciC Putative metal chaperone YciC
3015 JANDXB010000008.1 GCA_024330875.1_03015 CDS open 64313-64837 525_na     174_aa hypothetical protein
3016 JANDXB010000008.1 GCA_024330875.1_03016 CDS open 64853-66820 1968_na     655_aa ligA DNA ligase
3017 JANDXB010000008.1 GCA_024330875.1_03017 CDS open 66882-68171 1290_na     429_aa hypothetical protein
3018 JANDXB010000008.1 GCA_024330875.1_03018 CDS open 68246-69313 1068_na     355_aa hypothetical protein
3019 JANDXB010000008.1 GCA_024330875.1_03019 CDS open 69485-70675 1191_na     396_aa hypothetical protein
3020 JANDXB010000008.1 GCA_024330875.1_03020 CDS open 70736-74314 3579_na     1192_aa Pyruvate:ferredoxin oxidoreductase
3021 JANDXB010000008.1 GCA_024330875.1_03021 CDS open 74344-74505 162_na     53_aa hypothetical protein
3022 JANDXB010000008.1 GCA_024330875.1_03022 CDS open 74453-74659 207_na     68_aa hypothetical protein
3023 JANDXB010000008.1 GCA_024330875.1_03023 CDS open 75901-78519 2619_na     872_aa hypothetical protein
3024 JANDXB010000008.1 GCA_024330875.1_03024 CDS open 78631-80214 1584_na     527_aa hypothetical protein
3025 JANDXB010000008.1 GCA_024330875.1_03025 CDS open 80289-80834 546_na     181_aa yfcE Phosphodiesterase YfcE
3026 JANDXB010000008.1 GCA_024330875.1_03026 CDS open 81131-83572 2442_na     813_aa thrA Bifunctional aspartokinasehomoserine dehydrogenase 1
3027 JANDXB010000008.1 GCA_024330875.1_03027 CDS open 83606-84856 1251_na     416_aa apgM 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase
3028 JANDXB010000008.1 GCA_024330875.1_03028 CDS open 84957-86258 1302_na     433_aa thrC Threonine synthase
3029 JANDXB010000008.1 GCA_024330875.1_03029 CDS open 86296-86976 681_na     226_aa hypothetical protein
3030 JANDXB010000008.1 GCA_024330875.1_03030 CDS open 87024-87980 957_na     318_aa hpr Hydroxypyruvate reductase
3031 JANDXB010000008.1 GCA_024330875.1_03031 CDS open 88202-89242 1041_na     346_aa btuC Vitamin B12 import system permease protein BtuC
3032 JANDXB010000008.1 GCA_024330875.1_03032 CDS open 89248-90456 1209_na     402_aa hypothetical protein
3033 JANDXB010000008.1 GCA_024330875.1_03033 CDS open 90602-91810 1209_na     402_aa hypothetical protein
3034 JANDXB010000008.1 GCA_024330875.1_03034 CDS open 91888-94500 2613_na     870_aa gyrA_2 DNA gyrase subunit A
3035 JANDXB010000008.1 GCA_024330875.1_03035 CDS open 94856-97690 2835_na     944_aa clpX_2 ATP-dependent Clp protease ATP-binding subunit ClpX
3036 JANDXB010000008.1 tRNA open 97843-97916 tRNA-Thr(cgt)
3037 JANDXB010000008.1 tRNA open 97968-98041 tRNA-Gly(ccc)
3038 JANDXB010000008.1 GCA_024330875.1_03038 CDS open 98341-99822 1482_na     493_aa uxaB Altronate oxidoreductase
3039 JANDXB010000008.1 GCA_024330875.1_03039 CDS open 99986-100141 156_na     51_aa hypothetical protein
3040 JANDXB010000008.1 GCA_024330875.1_03040 CDS open 100134-101156 1023_na     340_aa rluD_2 Ribosomal large subunit pseudouridine synthase D
3041 JANDXB010000008.1 GCA_024330875.1_03041 CDS open 101770-102177 408_na     135_aa hypothetical protein
3042 JANDXB010000008.1 GCA_024330875.1_03042 CDS open 102189-102629 441_na     146_aa hypothetical protein
3043 JANDXB010000008.1 GCA_024330875.1_03043 CDS open 102881-103549 669_na     222_aa hypothetical protein
3044 JANDXB010000008.1 GCA_024330875.1_03044 CDS open 103950-104816 867_na     288_aa hypothetical protein
3045 JANDXB010000008.1 GCA_024330875.1_03045 CDS open 105787-106008 222_na     73_aa hypothetical protein
3046 JANDXB010000008.1 GCA_024330875.1_03046 CDS open 106020-106130 111_na     36_aa hypothetical protein
3047 JANDXB010000008.1 GCA_024330875.1_03047 CDS open 106201-107820 1620_na     539_aa ybiT putative ABC transporter ATP-binding protein YbiT
3048 JANDXB010000008.1 GCA_024330875.1_03048 CDS open 107942-108592 651_na     216_aa grpE Protein GrpE
3049 JANDXB010000008.1 GCA_024330875.1_03049 CDS open 108607-109767 1161_na     386_aa dnaJ Chaperone protein DnaJ
3050 JANDXB010000008.1 GCA_024330875.1_03050 CDS open 109914-111167 1254_na     417_aa fpgS Folylpolyglutamate synthase
3051 JANDXB010000008.1 GCA_024330875.1_03051 CDS open 111289-112374 1086_na     361_aa mro_1 Aldose 1-epimerase
3052 JANDXB010000008.1 GCA_024330875.1_03052 CDS open 112509-113855 1347_na     448_aa hypothetical protein
3053 JANDXB010000008.1 GCA_024330875.1_03053 CDS open 113959-115119 1161_na     386_aa galK Galactokinase
3054 JANDXB010000008.1 GCA_024330875.1_03054 CDS open 115690-116877 1188_na     395_aa mro_2 Aldose 1-epimerase
3055 JANDXB010000008.1 GCA_024330875.1_03055 CDS open 116853-116963 111_na     36_aa hypothetical protein
3056 JANDXB010000008.1 GCA_024330875.1_03056 CDS open 117030-118754 1725_na     574_aa hypothetical protein
3057 JANDXB010000008.1 GCA_024330875.1_03057 CDS open 118914-119594 681_na     226_aa hypothetical protein
3058 JANDXB010000008.1 GCA_024330875.1_03058 CDS open 119662-120360 699_na     232_aa ulaF L-ribulose-5-phosphate 4-epimerase UlaF
3059 JANDXB010000008.1 GCA_024330875.1_03059 CDS open 120449-121990 1542_na     513_aa araA L-arabinose isomerase
3060 JANDXB010000008.1 GCA_024330875.1_03060 CDS open 122013-123605 1593_na     530_aa xylB_2 Xylulose kinase
3061 JANDXB010000008.1 GCA_024330875.1_03061 CDS open 123720-125291 1572_na     523_aa abf2 Intracellular exo-alpha-L-arabinofuranosidase 2
3062 JANDXB010000008.1 GCA_024330875.1_03062 CDS open 125404-127425 2022_na     673_aa tkt Transketolase
3063 JANDXB010000008.1 GCA_024330875.1_03063 CDS open 127583-128026 444_na     147_aa rpiB Ribose-5-phosphate isomerase B
3064 JANDXB010000008.1 GCA_024330875.1_03064 CDS open 128104-128976 873_na     290_aa deoD Purine nucleoside phosphorylase DeoD-type
3065 JANDXB010000008.1 GCA_024330875.1_03065 CDS open 129157-130575 1419_na     472_aa mnmE tRNA modification GTPase MnmE
3066 JANDXB010000008.1 GCA_024330875.1_03066 CDS open 130886-131818 933_na     310_aa hypothetical protein
3067 JANDXB010000009.1 GCA_024330875.1_03067 CDS open 418-1365 948_na     315_aa cysK1 O-acetylserine sulfhydrylase
3068 JANDXB010000009.1 GCA_024330875.1_03068 CDS open 1397-2692 1296_na     431_aa O-acetyl-L-homoserine sulfhydrylase
3069 JANDXB010000009.1 GCA_024330875.1_03069 CDS open 3271-3384 114_na     37_aa hypothetical protein
3070 JANDXB010000009.1 GCA_024330875.1_03070 CDS open 3348-4250 903_na     300_aa hypothetical protein
3071 JANDXB010000009.1 GCA_024330875.1_03071 CDS open 4314-4760 447_na     148_aa hypothetical protein
3072 JANDXB010000009.1 GCA_024330875.1_03072 CDS open 4821-5165 345_na     114_aa hypothetical protein
3073 JANDXB010000009.1 GCA_024330875.1_03073 CDS open 5272-6852 1581_na     526_aa glcA Glycolate permease GlcA
3074 JANDXB010000009.1 GCA_024330875.1_03074 CDS open 6942-7886 945_na     314_aa hypothetical protein
3075 JANDXB010000009.1 GCA_024330875.1_03075 CDS open 8070-8885 816_na     271_aa hypothetical protein
3076 JANDXB010000009.1 GCA_024330875.1_03076 CDS open 8902-9906 1005_na     334_aa hypothetical protein
3077 JANDXB010000009.1 GCA_024330875.1_03077 CDS open 9994-10956 963_na     320_aa manA_2 Mannose-6-phosphate isomerase ManA
3078 JANDXB010000009.1 GCA_024330875.1_03078 CDS open 11024-12481 1458_na     485_aa trkH Trk system potassium uptake protein TrkH
3079 JANDXB010000009.1 GCA_024330875.1_03079 CDS open 12569-13912 1344_na     447_aa trkA Trk system potassium uptake protein TrkA
3080 JANDXB010000009.1 GCA_024330875.1_03080 CDS open 13940-15835 1896_na     631_aa dxs_2 1-deoxy-D-xylulose-5-phosphate synthase
3081 JANDXB010000009.1 GCA_024330875.1_03081 CDS open 16035-17441 1407_na     468_aa pepC Aminopeptidase C
3082 JANDXB010000009.1 GCA_024330875.1_03082 CDS open 17455-18738 1284_na     427_aa hypothetical protein
3083 JANDXB010000009.1 GCA_024330875.1_03083 CDS open 19077-22259 3183_na     1060_aa TonB-dependent receptor P3
3084 JANDXB010000009.1 GCA_024330875.1_03084 CDS open 22273-24294 2022_na     673_aa hypothetical protein
3085 JANDXB010000009.1 GCA_024330875.1_03085 CDS open 24547-24801 255_na     84_aa hypothetical protein
3086 JANDXB010000009.1 GCA_024330875.1_03086 CDS open 24823-26076 1254_na     417_aa hypothetical protein
3087 JANDXB010000009.1 GCA_024330875.1_03087 CDS open 26359-27258 900_na     299_aa ddh Meso-diaminopimelate D-dehydrogenase
3088 JANDXB010000009.1 GCA_024330875.1_03088 CDS open 28048-28662 615_na     204_aa ruvA Holliday junction ATP-dependent DNA helicase RuvA
3089 JANDXB010000009.1 GCA_024330875.1_03089 CDS open 28742-36313 7572_na     2523_aa hypothetical protein
3090 JANDXB010000009.1 GCA_024330875.1_03090 CDS open 36390-37979 1590_na     529_aa nadB L-aspartate oxidase
3091 JANDXB010000009.1 GCA_024330875.1_03091 CDS open 38151-38558 408_na     135_aa hypothetical protein
3092 JANDXB010000009.1 GCA_024330875.1_03092 CDS open 38555-39832 1278_na     425_aa hypothetical protein
3093 JANDXB010000009.1 GCA_024330875.1_03093 CDS open 39848-41101 1254_na     417_aa hypothetical protein
3094 JANDXB010000009.1 GCA_024330875.1_03094 CDS open 41137-42177 1041_na     346_aa nth_2 Endonuclease III
3095 JANDXB010000009.1 GCA_024330875.1_03095 CDS open 42266-43033 768_na     255_aa hypothetical protein
3096 JANDXB010000009.1 GCA_024330875.1_03096 CDS open 43217-43759 543_na     180_aa rbr1 Rubrerythrin-1
3097 JANDXB010000009.1 GCA_024330875.1_03097 CDS open 43853-45481 1629_na     542_aa hypothetical protein
3098 JANDXB010000009.1 GCA_024330875.1_03098 CDS open 45647-46753 1107_na     368_aa ald Alanine dehydrogenase
3099 JANDXB010000009.1 GCA_024330875.1_03099 CDS open 46895-47674 780_na     259_aa hypothetical protein
3100 JANDXB010000009.1 GCA_024330875.1_03100 CDS open 47700-49109 1410_na     469_aa hypothetical protein
3101 JANDXB010000009.1 GCA_024330875.1_03101 CDS open 49127-49669 543_na     180_aa hypothetical protein
3102 JANDXB010000009.1 GCA_024330875.1_03102 CDS open 49818-51125 1308_na     435_aa eno Enolase
3103 JANDXB010000009.1 GCA_024330875.1_03103 CDS open 51329-52075 747_na     248_aa zupT Zinc transporter ZupT
3104 JANDXB010000009.1 GCA_024330875.1_03104 CDS open 52419-52547 129_na     42_aa hypothetical protein
3105 JANDXB010000009.1 GCA_024330875.1_03105 CDS open 52658-54223 1566_na     521_aa hypothetical protein
3106 JANDXB010000009.1 GCA_024330875.1_03106 CDS open 54490-56679 2190_na     729_aa glnA_2 Glutamine synthetase
3107 JANDXB010000009.1 GCA_024330875.1_03107 CDS open 56735-57967 1233_na     410_aa dapL_2 LL-diaminopimelate aminotransferase
3108 JANDXB010000009.1 GCA_024330875.1_03108 CDS open 58030-58869 840_na     279_aa dapF Diaminopimelate epimerase
3109 JANDXB010000009.1 GCA_024330875.1_03109 CDS open 59198-59413 216_na     71_aa glnB_1 Nitrogen regulatory protein P-II
3110 JANDXB010000009.1 GCA_024330875.1_03110 CDS open 59488-60579 1092_na     363_aa nrgA Ammonium transporter
3111 JANDXB010000009.1 GCA_024330875.1_03111 CDS open 60910-61929 1020_na     339_aa hypothetical protein
3112 JANDXB010000009.1 GCA_024330875.1_03112 CDS open 61944-64121 2178_na     725_aa hypothetical protein
3113 JANDXB010000009.1 GCA_024330875.1_03113 CDS open 64133-65005 873_na     290_aa hypothetical protein
3114 JANDXB010000009.1 GCA_024330875.1_03114 CDS open 65010-65705 696_na     231_aa cas5d CRISPR pre-crRNA endoribonuclease Cas5d
3115 JANDXB010000009.1 GCA_024330875.1_03115 CDS open 65702-67393 1692_na     563_aa hypothetical protein
3116 JANDXB010000009.1 GCA_024330875.1_03116 CDS open 67415-68308 894_na     297_aa hypothetical protein
3117 JANDXB010000009.1 GCA_024330875.1_03117 CDS open 68316-68987 672_na     223_aa hypothetical protein
3118 JANDXB010000009.1 GCA_024330875.1_03118 CDS open 68971-69993 1023_na     340_aa cas1 CRISPR-associated endonuclease Cas1
3119 JANDXB010000009.1 GCA_024330875.1_03119 CDS open 69997-70287 291_na     96_aa cas2 CRISPR-associated endonuclease Cas2
3120 JANDXB010000009.1 GCA_024330875.1_03120 CDS open 77153-77830 678_na     225_aa hypothetical protein
3121 JANDXB010000009.1 GCA_024330875.1_03121 CDS open 78079-81948 3870_na     1289_aa rcsC_8 Sensor histidine kinase RcsC
3122 JANDXB010000009.1 GCA_024330875.1_03122 CDS open 82110-85196 3087_na     1028_aa TonB-dependent receptor P39
3123 JANDXB010000009.1 GCA_024330875.1_03123 CDS open 85229-86788 1560_na     519_aa SusD-like protein P2
3124 JANDXB010000009.1 GCA_024330875.1_03124 CDS open 86738-86839 102_na     33_aa hypothetical protein
3125 JANDXB010000009.1 GCA_024330875.1_03125 CDS open 86869-89508 2640_na     879_aa lacZ_6 Beta-galactosidase
3126 JANDXB010000009.1 GCA_024330875.1_03126 CDS open 89986-90597 612_na     203_aa D-ribitol-5-phosphate phosphatase
3127 JANDXB010000009.1 GCA_024330875.1_03127 CDS open 90647-91957 1311_na     436_aa hypothetical protein
3128 JANDXB010000009.1 GCA_024330875.1_03128 CDS open 92244-93383 1140_na     379_aa hypothetical protein
3129 JANDXB010000009.1 GCA_024330875.1_03129 CDS open 93530-95521 1992_na     663_aa nagB_1 Glucosamine-6-phosphate deaminase
3130 JANDXB010000009.1 GCA_024330875.1_03130 CDS open 95555-96346 792_na     263_aa nagB_2 Glucosamine-6-phosphate deaminase
3131 JANDXB010000009.1 GCA_024330875.1_03131 CDS open 96406-97602 1197_na     398_aa mlc Protein mlc
3132 JANDXB010000009.1 GCA_024330875.1_03132 CDS open 97958-99193 1236_na     411_aa mdtG Multidrug resistance protein MdtG
3133 JANDXB010000009.1 GCA_024330875.1_03133 CDS open 99239-100156 918_na     305_aa nanA N-acetylneuraminate lyase
3134 JANDXB010000009.1 GCA_024330875.1_03134 CDS open 100193-101380 1188_na     395_aa ce Cellobiose 2-epimerase
3135 JANDXB010000009.1 GCA_024330875.1_03135 CDS open 101401-102678 1278_na     425_aa hypothetical protein
3136 JANDXB010000009.1 GCA_024330875.1_03136 CDS open 102710-103105 396_na     131_aa hypothetical protein
3137 JANDXB010000009.1 GCA_024330875.1_03137 CDS open 103145-106528 3384_na     1127_aa hypothetical protein
3138 JANDXB010000009.1 GCA_024330875.1_03138 CDS open 106567-108369 1803_na     600_aa hypothetical protein
3139 JANDXB010000009.1 GCA_024330875.1_03139 CDS open 108810-110675 1866_na     621_aa hypothetical protein
3140 JANDXB010000009.1 GCA_024330875.1_03140 CDS open 110978-114133 3156_na     1051_aa nanM N-acetylneuraminate epimerase
3141 JANDXB010000009.1 GCA_024330875.1_03141 CDS open 114404-114760 357_na     118_aa glnB_2 Nitrogen regulatory protein P-II
3142 JANDXB010000009.1 GCA_024330875.1_03142 CDS open 114824-116086 1263_na     420_aa amt Ammonia channel
3143 JANDXB010000009.1 GCA_024330875.1_03143 CDS open 116272-116991 720_na     239_aa hypothetical protein
3144 JANDXB010000009.1 GCA_024330875.1_03144 CDS open 117222-118706 1485_na     494_aa hypothetical protein
3145 JANDXB010000009.1 GCA_024330875.1_03145 CDS open 118741-120888 2148_na     715_aa hypothetical protein
3146 JANDXB010000009.1 GCA_024330875.1_03146 CDS open 121669-123456 1788_na     595_aa asnB Asparagine synthetase B [glutamine-hydrolyzing]
3147 JANDXB010000009.1 GCA_024330875.1_03147 CDS open 123805-128328 4524_na     1507_aa gltB Ferredoxin-dependent glutamate synthase 1
3148 JANDXB010000009.1 GCA_024330875.1_03148 CDS open 128348-129691 1344_na     447_aa gltD_2 Glutamate synthase [NADPH] small chain