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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Bacteroides caccae (GCA_024759085.1)

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PROKKA Annotations for GCA_024759085.1
Genome Selected: Bacteroides caccae
ContigsBases CDSrRNA tmRNAtRNA
1 5023218 4499 15 1 79
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:10]    |    Number of Records Found: 4612 [10 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
4501 CP103084.1 GCA_024759085.1_04501 CDS open 4891663-4892637 975_na     324_aa (2E%2C6E)-farnesyl diphosphate synthase
4502 CP103084.1 GCA_024759085.1_04502 CDS open 4892709-4893392 684_na     227_aa hypothetical protein
4503 CP103084.1 GCA_024759085.1_04503 CDS open 4893437-4894297 861_na     286_aa cmk_1 Cytidylate kinase
4504 CP103084.1 GCA_024759085.1_04504 CDS open 4894339-4895205 867_na     288_aa ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
4505 CP103084.1 GCA_024759085.1_04505 CDS open 4895416-4896396 981_na     326_aa pfkA ATP-dependent 6-phosphofructokinase 1
4506 CP103084.1 GCA_024759085.1_04506 CDS open 4896521-4897753 1233_na     410_aa hypothetical protein
4507 CP103084.1 GCA_024759085.1_04507 CDS open 4897854-4899245 1392_na     463_aa hypothetical protein
4508 CP103084.1 GCA_024759085.1_04508 CDS open 4899286-4901700 2415_na     804_aa btuB_12 Vitamin B12 transporter BtuB
4509 CP103084.1 GCA_024759085.1_04509 CDS open 4901884-4903956 2073_na     690_aa namA NADPH dehydrogenase
4510 CP103084.1 GCA_024759085.1_04510 CDS open 4904086-4904751 666_na     221_aa hypothetical protein
4511 CP103084.1 GCA_024759085.1_04511 CDS open 4904946-4906289 1344_na     447_aa gltA Citrate synthase
4512 CP103084.1 GCA_024759085.1_04512 CDS open 4906315-4907364 1050_na     349_aa icd_1 Isocitrate dehydrogenase [NADP]
4513 CP103084.1 GCA_024759085.1_04513 CDS open 4907354-4907506 153_na     50_aa icd_2 Isocitrate dehydrogenase [NADP]
4514 CP103084.1 GCA_024759085.1_04514 CDS open 4907554-4909797 2244_na     747_aa acnA Aconitate hydratase A
4515 CP103084.1 GCA_024759085.1_04515 CDS open 4909864-4911018 1155_na     384_aa hypothetical protein
4516 CP103084.1 GCA_024759085.1_04516 CDS open 4911074-4911808 735_na     244_aa hypothetical protein
4517 CP103084.1 GCA_024759085.1_04517 CDS open 4911801-4912007 207_na     68_aa hypothetical protein
4518 CP103084.1 GCA_024759085.1_04518 CDS open 4912223-4913266 1044_na     347_aa Ketol-acid reductoisomerase (NAD(+))
4519 CP103084.1 GCA_024759085.1_04519 CDS open 4913332-4914075 744_na     247_aa hypothetical protein
4520 CP103084.1 GCA_024759085.1_04520 CDS open 4914075-4914638 564_na     187_aa ilvH Putative acetolactate synthase small subunit
4521 CP103084.1 GCA_024759085.1_04521 CDS open 4914674-4916371 1698_na     565_aa ilvG Acetolactate synthase isozyme 2 large subunit
4522 CP103084.1 GCA_024759085.1_04522 CDS open 4916397-4918199 1803_na     600_aa ilvD Dihydroxy-acid dehydratase
4523 CP103084.1 GCA_024759085.1_04523 CDS open 4918681-4919274 594_na     197_aa slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD
4524 CP103084.1 GCA_024759085.1_04524 CDS open 4919376-4920716 1341_na     446_aa hypothetical protein
4525 CP103084.1 GCA_024759085.1_04525 CDS open 4920797-4921507 711_na     236_aa hypothetical protein
4526 CP103084.1 GCA_024759085.1_04526 CDS open 4921479-4921889 411_na     136_aa hypothetical protein
4527 CP103084.1 GCA_024759085.1_04527 CDS open 4921919-4922704 786_na     261_aa hypothetical protein
4528 CP103084.1 GCA_024759085.1_04528 CDS open 4922694-4922939 246_na     81_aa hypothetical protein
4529 CP103084.1 GCA_024759085.1_04529 CDS open 4922942-4923502 561_na     186_aa hypothetical protein
4530 CP103084.1 GCA_024759085.1_04530 CDS open 4923661-4924737 1077_na     358_aa aroC Chorismate synthase
4531 CP103084.1 GCA_024759085.1_04531 CDS open 4924751-4926115 1365_na     454_aa dapE_2 Succinyl-diaminopimelate desuccinylase
4532 CP103084.1 GCA_024759085.1_04532 CDS open 4926060-4926182 123_na     40_aa hypothetical protein
4533 CP103084.1 GCA_024759085.1_04533 CDS open 4926220-4927278 1059_na     352_aa cbh_2 Choloylglycine hydrolase
4534 CP103084.1 GCA_024759085.1_04534 CDS open 4927424-4927666 243_na     80_aa hypothetical protein
4535 CP103084.1 GCA_024759085.1_04535 CDS open 4927614-4928378 765_na     254_aa egtB_3 Hercynine oxygenase
4536 CP103084.1 GCA_024759085.1_04536 CDS open 4928511-4929530 1020_na     339_aa hypothetical protein
4537 CP103084.1 GCA_024759085.1_04537 CDS open 4929556-4931571 2016_na     671_aa hypothetical protein
4538 CP103084.1 GCA_024759085.1_04538 CDS open 4931583-4934663 3081_na     1026_aa TonB-dependent receptor P26
4539 CP103084.1 GCA_024759085.1_04539 CDS open 4934685-4935965 1281_na     426_aa hypothetical protein
4540 CP103084.1 GCA_024759085.1_04540 CDS open 4936280-4936624 345_na     114_aa hypothetical protein
4541 CP103084.1 GCA_024759085.1_04541 CDS open 4936949-4939123 2175_na     724_aa topB_4 DNA topoisomerase 3
4542 CP103084.1 GCA_024759085.1_04542 CDS open 4939288-4941435 2148_na     715_aa mutB Methylmalonyl-CoA mutase large subunit
4543 CP103084.1 GCA_024759085.1_04543 CDS open 4941437-4943182 1746_na     581_aa icmF Fused isobutyryl-CoA mutase
4544 CP103084.1 GCA_024759085.1_04544 CDS open 4943609-4945273 1665_na     554_aa aspT_4 Aspartatealanine antiporter
4545 CP103084.1 GCA_024759085.1_04545 CDS open 4945368-4946003 636_na     211_aa cmk_2 Cytidylate kinase
4546 CP103084.1 GCA_024759085.1_04546 CDS open 4946055-4948811 2757_na     918_aa hypothetical protein
4547 CP103084.1 GCA_024759085.1_04547 CDS open 4949063-4950367 1305_na     434_aa hypothetical protein
4548 CP103084.1 GCA_024759085.1_04548 CDS open 4950399-4951715 1317_na     438_aa hypothetical protein
4549 CP103084.1 GCA_024759085.1_04549 CDS open 4951732-4952892 1161_na     386_aa hypothetical protein
4550 CP103084.1 GCA_024759085.1_04550 CDS open 4952889-4953803 915_na     304_aa btuB_13 Vitamin B12 transporter BtuB
4551 CP103084.1 GCA_024759085.1_04551 CDS open 4953817-4954896 1080_na     359_aa btuB_14 Vitamin B12 transporter BtuB
4552 CP103084.1 misc_RNA open 4955106-4955318 Cobalamin
4553 CP103084.1 GCA_024759085.1_04553 CDS open 4955447-4956580 1134_na     377_aa hypothetical protein
4554 CP103084.1 GCA_024759085.1_04554 CDS open 4956577-4957593 1017_na     338_aa hmuU_2 Hemin transport system permease protein HmuU
4555 CP103084.1 GCA_024759085.1_04555 CDS open 4957590-4958351 762_na     253_aa fpuD_2 Petrobactin import ATP-binding protein FpuD
4556 CP103084.1 GCA_024759085.1_04556 CDS open 4958535-4958969 435_na     144_aa hypothetical protein
4557 CP103084.1 GCA_024759085.1_04557 CDS open 4959126-4960508 1383_na     460_aa hypothetical protein
4558 CP103084.1 GCA_024759085.1_04558 CDS open 4960505-4963645 3141_na     1046_aa bepE_4 Efflux pump membrane transporter BepE
4559 CP103084.1 GCA_024759085.1_04559 CDS open 4963642-4964712 1071_na     356_aa ttgG Toluene efflux pump periplasmic linker protein TtgG
4560 CP103084.1 GCA_024759085.1_04560 CDS open 4965001-4966383 1383_na     460_aa mepA_4 Multidrug export protein MepA
4561 CP103084.1 GCA_024759085.1_04561 CDS open 4966459-4968189 1731_na     576_aa lysS Lysine--tRNA ligase
4562 CP103084.1 GCA_024759085.1_04562 CDS open 4968213-4969208 996_na     331_aa gpsA Glycerol-3-phosphate dehydrogenase [NAD(P)+]
4563 CP103084.1 GCA_024759085.1_04563 CDS open 4969227-4970564 1338_na     445_aa pgi Glucose-6-phosphate isomerase
4564 CP103084.1 GCA_024759085.1_04564 CDS open 4970640-4971143 504_na     167_aa hypothetical protein
4565 CP103084.1 GCA_024759085.1_04565 CDS open 4971350-4972024 675_na     224_aa hxpA Hexitol phosphatase A
4566 CP103084.1 GCA_024759085.1_04566 CDS open 4972055-4974253 2199_na     732_aa hypothetical protein
4567 CP103084.1 GCA_024759085.1_04567 CDS open 4974300-4974908 609_na     202_aa hypothetical protein
4568 CP103084.1 GCA_024759085.1_04568 CDS open 4975212-4975838 627_na     208_aa hypothetical protein
4569 CP103084.1 GCA_024759085.1_04569 CDS open 4975857-4978286 2430_na     809_aa ptk_2 Tyrosine-protein kinase ptk
4570 CP103084.1 GCA_024759085.1_04570 CDS open 4978299-4979093 795_na     264_aa hypothetical protein
4571 CP103084.1 GCA_024759085.1_04571 CDS open 4979148-4979576 429_na     142_aa hypothetical protein
4572 CP103084.1 GCA_024759085.1_04572 CDS open 4979582-4980571 990_na     329_aa wecA_2 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase
4573 CP103084.1 GCA_024759085.1_04573 CDS open 4980587-4981819 1233_na     410_aa hypothetical protein
4574 CP103084.1 GCA_024759085.1_04574 CDS open 4981882-4982463 582_na     193_aa hypothetical protein
4575 CP103084.1 GCA_024759085.1_04575 CDS open 4982438-4983379 942_na     313_aa hypothetical protein
4576 CP103084.1 GCA_024759085.1_04576 CDS open 4983488-4983616 129_na     42_aa hypothetical protein
4577 CP103084.1 GCA_024759085.1_04577 CDS open 4983973-4984929 957_na     318_aa hypothetical protein
4578 CP103084.1 GCA_024759085.1_04578 CDS open 4985397-4986101 705_na     234_aa hypothetical protein
4579 CP103084.1 GCA_024759085.1_04579 CDS open 4986098-4987216 1119_na     372_aa hypothetical protein
4580 CP103084.1 GCA_024759085.1_04580 CDS open 4987237-4988337 1101_na     366_aa hypothetical protein
4581 CP103084.1 GCA_024759085.1_04581 CDS open 4988346-4989227 882_na     293_aa hypothetical protein
4582 CP103084.1 GCA_024759085.1_04582 CDS open 4989230-4990453 1224_na     407_aa gtfA_4 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase GtfA subunit
4583 CP103084.1 GCA_024759085.1_04583 CDS open 4990509-4990613 105_na     34_aa hypothetical protein
4584 CP103084.1 GCA_024759085.1_04584 CDS open 4990632-4991192 561_na     186_aa dapH_4 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase
4585 CP103084.1 GCA_024759085.1_04585 CDS open 4991202-4992287 1086_na     361_aa hypothetical protein
4586 CP103084.1 GCA_024759085.1_04586 CDS open 4992284-4993495 1212_na     403_aa hypothetical protein
4587 CP103084.1 GCA_024759085.1_04587 CDS open 4993520-4995025 1506_na     501_aa hypothetical protein
4588 CP103084.1 GCA_024759085.1_04588 CDS open 4995026-4995637 612_na     203_aa dapH_5 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase
4589 CP103084.1 GCA_024759085.1_04589 CDS open 4995788-4997011 1224_na     407_aa wecC UDP-N-acetyl-D-mannosamine dehydrogenase
4590 CP103084.1 GCA_024759085.1_04590 CDS open 4997062-4998225 1164_na     387_aa wecB UDP-N-acetylglucosamine 2-epimerase
4591 CP103084.1 GCA_024759085.1_04591 CDS open 4998304-4999497 1194_na     397_aa wbpI_2 UDP-2%2C3-diacetamido-2%2C3-dideoxy-D-glucuronate 2-epimerase
4592 CP103084.1 GCA_024759085.1_04592 CDS open 4999502-5000725 1224_na     407_aa wbjC UDP-2-acetamido-2%2C6-beta-L-arabino-hexul-4-ose reductase
4593 CP103084.1 GCA_024759085.1_04593 CDS open 5000743-5001792 1050_na     349_aa capD UDP-glucose 4-epimerase
4594 CP103084.1 GCA_024759085.1_04594 CDS open 5001814-5002467 654_na     217_aa ugd_2 UDP-glucose 6-dehydrogenase
4595 CP103084.1 GCA_024759085.1_04595 CDS open 5002439-5003125 687_na     228_aa ugd_3 UDP-glucose 6-dehydrogenase
4596 CP103084.1 GCA_024759085.1_04596 CDS open 5003166-5005091 1926_na     641_aa hldD ADP-L-glycero-D-manno-heptose-6-epimerase
4597 CP103084.1 GCA_024759085.1_04597 CDS open 5005176-5005724 549_na     182_aa hypothetical protein
4598 CP103084.1 GCA_024759085.1_04598 CDS open 5006371-5007579 1209_na     402_aa xerC_24 Tyrosine recombinase XerC
4599 CP103084.1 tRNA open 5007863-5007936 tRNA-Arg(ccg)
4600 CP103084.1 GCA_024759085.1_04600 CDS open 5008156-5009178 1023_na     340_aa asnA Aspartate--ammonia ligase
4601 CP103084.1 GCA_024759085.1_04601 CDS open 5009200-5009862 663_na     220_aa ung_2 Uracil-DNA glycosylase
4602 CP103084.1 GCA_024759085.1_04602 CDS open 5009988-5012036 2049_na     682_aa lptD_2 LPS-assembly protein LptD
4603 CP103084.1 GCA_024759085.1_04603 CDS open 5012047-5012697 651_na     216_aa lptD_3 LPS-assembly protein LptD
4604 CP103084.1 GCA_024759085.1_04604 CDS open 5012787-5013323 537_na     178_aa hypothetical protein
4605 CP103084.1 GCA_024759085.1_04605 CDS open 5013392-5014558 1167_na     388_aa hypothetical protein
4606 CP103084.1 GCA_024759085.1_04606 CDS open 5014797-5016761 1965_na     654_aa hypothetical protein
4607 CP103084.1 GCA_024759085.1_04607 CDS open 5017161-5017769 609_na     202_aa hypothetical protein
4608 CP103084.1 GCA_024759085.1_04608 CDS open 5017904-5018098 195_na     64_aa hypothetical protein
4609 CP103084.1 GCA_024759085.1_04609 CDS open 5018255-5019358 1104_na     367_aa yhcG_5 Putative nuclease YhcG
4610 CP103084.1 GCA_024759085.1_04610 CDS open 5019718-5020614 897_na     298_aa hypothetical protein
4611 CP103084.1 GCA_024759085.1_04611 CDS open 5020738-5021964 1227_na     408_aa hypothetical protein
4612 CP103084.1 GCA_024759085.1_04612 CDS open 5021974-5022867 894_na     297_aa hypothetical protein