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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_026427435.1)

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PROKKA Annotations for GCA_026427435.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
4 2650399 2468 19 1 61
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Annotation Table [page:6]    |    Number of Records Found: 2641 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CP084480.1 GCA_026427435.1_02501 CDS open 2502656-2502874 219_na     72_aa hypothetical protein
2502 CP084480.1 GCA_026427435.1_02502 CDS open 2503231-2504790 1560_na     519_aa rny Ribonuclease Y
2503 CP084480.1 GCA_026427435.1_02503 CDS open 2505059-2506105 1047_na     348_aa recA Protein RecA
2504 CP084480.1 GCA_026427435.1_02504 CDS open 2506279-2507421 1143_na     380_aa cinA Putative competence-damage inducible protein
2505 CP084480.1 GCA_026427435.1_02505 CDS open 2507592-2508167 576_na     191_aa pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
2506 CP084480.1 GCA_026427435.1_02506 CDS open 2508189-2508581 393_na     130_aa hypothetical protein
2507 CP084480.1 GCA_026427435.1_02507 CDS open 2508603-2509436 834_na     277_aa hypothetical protein
2508 CP084480.1 GCA_026427435.1_02508 CDS open 2509534-2510238 705_na     234_aa fabG_4 3-oxoacyl-[acyl-carrier-protein] reductase FabG
2509 CP084480.1 GCA_026427435.1_02509 CDS open 2510235-2511527 1293_na     430_aa hypothetical protein
2510 CP084480.1 GCA_026427435.1_02510 CDS open 2511520-2512788 1269_na     422_aa hypothetical protein
2511 CP084480.1 GCA_026427435.1_02511 CDS open 2512867-2513601 735_na     244_aa phnF putative transcriptional regulator PhnF
2512 CP084480.1 GCA_026427435.1_02512 CDS open 2513605-2515974 2370_na     789_aa ftsK DNA translocase FtsK
2513 CP084480.1 GCA_026427435.1_02513 CDS open 2516249-2517922 1674_na     557_aa rnj2 Ribonuclease J 2
2514 CP084480.1 GCA_026427435.1_02514 CDS open 2518106-2520202 2097_na     698_aa pnp Polyribonucleotide nucleotidyltransferase
2515 CP084480.1 misc_RNA open 2520022-2520350 rliD
2516 CP084480.1 GCA_026427435.1_02516 CDS open 2520338-2520607 270_na     89_aa rpsO 30S ribosomal protein S15
2517 CP084480.1 GCA_026427435.1_02517 CDS open 2520721-2521692 972_na     323_aa ribF Bifunctional riboflavin kinaseFMN adenylyltransferase
2518 CP084480.1 GCA_026427435.1_02518 CDS open 2521706-2522623 918_na     305_aa truB tRNA pseudouridine synthase B
2519 CP084480.1 GCA_026427435.1_02519 CDS open 2522821-2523168 348_na     115_aa rbfA Ribosome-binding factor A
2520 CP084480.1 GCA_026427435.1_02520 CDS open 2523378-2525534 2157_na     718_aa infB Translation initiation factor IF-2
2521 CP084480.1 GCA_026427435.1_02521 CDS open 2525539-2525856 318_na     105_aa rplGA putative ribosomal protein YlxQ
2522 CP084480.1 GCA_026427435.1_02522 CDS open 2525853-2526146 294_na     97_aa hypothetical protein
2523 CP084480.1 GCA_026427435.1_02523 CDS open 2526155-2527318 1164_na     387_aa nusA Transcription terminationantitermination protein NusA
2524 CP084480.1 GCA_026427435.1_02524 CDS open 2527339-2527806 468_na     155_aa rimP Ribosome maturation factor RimP
2525 CP084480.1 GCA_026427435.1_02525 CDS open 2527943-2532259 4317_na     1438_aa polC DNA polymerase III PolC-type
2526 CP084480.1 GCA_026427435.1_02526 CDS open 2532481-2534181 1701_na     566_aa proS Proline--tRNA ligase
2527 CP084480.1 GCA_026427435.1_02527 CDS open 2534200-2535486 1287_na     428_aa Putative zinc metalloprotease
2528 CP084480.1 GCA_026427435.1_02528 CDS open 2535995-2538586 2592_na     863_aa hypothetical protein
2529 CP084480.1 GCA_026427435.1_02529 CDS open 2538797-2539579 783_na     260_aa hypothetical protein
2530 CP084480.1 GCA_026427435.1_02530 CDS open 2539593-2540354 762_na     253_aa uppS Isoprenyl transferase
2531 CP084480.1 GCA_026427435.1_02531 CDS open 2540616-2541170 555_na     184_aa frr Ribosome-recycling factor
2532 CP084480.1 GCA_026427435.1_02532 CDS open 2541255-2541977 723_na     240_aa pyrH Uridylate kinase
2533 CP084480.1 GCA_026427435.1_02533 CDS open 2542114-2542992 879_na     292_aa tsf Elongation factor Ts
2534 CP084480.1 GCA_026427435.1_02534 CDS open 2543176-2543964 789_na     262_aa rpsB 30S ribosomal protein S2
2535 CP084480.1 GCA_026427435.1_02535 CDS open 2544183-2544956 774_na     257_aa codY GTP-sensing transcriptional pleiotropic repressor CodY
2536 CP084480.1 GCA_026427435.1_02536 CDS open 2544978-2546381 1404_na     467_aa hslU ATP-dependent protease ATPase subunit HslU
2537 CP084480.1 GCA_026427435.1_02537 CDS open 2546428-2546970 543_na     180_aa hslV ATP-dependent protease subunit HslV
2538 CP084480.1 GCA_026427435.1_02538 CDS open 2546971-2547864 894_na     297_aa xerC_5 Tyrosine recombinase XerC
2539 CP084480.1 GCA_026427435.1_02539 CDS open 2547996-2549303 1308_na     435_aa trmFO Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
2540 CP084480.1 GCA_026427435.1_02540 CDS open 2549355-2551424 2070_na     689_aa topA DNA topoisomerase 1
2541 CP084480.1 GCA_026427435.1_02541 CDS open 2551596-2552510 915_na     304_aa hypothetical protein
2542 CP084480.1 misc_RNA open 2552753-2552981 S35
2543 CP084480.1 GCA_026427435.1_02543 CDS open 2553127-2554362 1236_na     411_aa femA_3 Aminoacyltransferase FemA
2544 CP084480.1 GCA_026427435.1_02544 CDS open 2554521-2555429 909_na     302_aa sucD Succinate--CoA ligase [ADP-forming] subunit alpha
2545 CP084480.1 GCA_026427435.1_02545 CDS open 2555451-2556617 1167_na     388_aa sucC Succinate--CoA ligase [ADP-forming] subunit beta
2546 CP084480.1 GCA_026427435.1_02546 CDS open 2556728-2557495 768_na     255_aa rnhB Ribonuclease HII
2547 CP084480.1 GCA_026427435.1_02547 CDS open 2557479-2558363 885_na     294_aa rbgA Ribosome biogenesis GTPase A
2548 CP084480.1 GCA_026427435.1_02548 CDS open 2558620-2561211 2592_na     863_aa hypothetical protein
2549 CP084480.1 GCA_026427435.1_02549 CDS open 2561216-2563822 2607_na     868_aa hypothetical protein
2550 CP084480.1 GCA_026427435.1_02550 CDS open 2564069-2564419 351_na     116_aa rplS 50S ribosomal protein L19
2551 CP084480.1 misc_RNA open 2564439-2564481 L19_leader
2552 CP084480.1 GCA_026427435.1_02552 CDS open 2564525-2565262 738_na     245_aa trmD tRNA (guanine-N(1)-)-methyltransferase
2553 CP084480.1 GCA_026427435.1_02553 CDS open 2565262-2565762 501_na     166_aa rimM Ribosome maturation factor RimM
2554 CP084480.1 GCA_026427435.1_02554 CDS open 2565892-2566167 276_na     91_aa rpsP 30S ribosomal protein S16
2555 CP084480.1 GCA_026427435.1_02555 CDS open 2566382-2566642 261_na     86_aa hypothetical protein
2556 CP084480.1 GCA_026427435.1_02556 CDS open 2566632-2567006 375_na     124_aa hypothetical protein
2557 CP084480.1 GCA_026427435.1_02557 CDS open 2566975-2568120 1146_na     381_aa yhfS Putative acetyl-CoA C-acetyltransferase YhfS
2558 CP084480.1 GCA_026427435.1_02558 CDS open 2568117-2569499 1383_na     460_aa yhfT putative acyl--CoA ligase YhfT
2559 CP084480.1 GCA_026427435.1_02559 CDS open 2569895-2570311 417_na     138_aa IS200IS605 family transposase ISSep3
2560 CP084480.1 GCA_026427435.1_02560 CDS open 2570537-2571904 1368_na     455_aa ffh Signal recognition particle protein
2561 CP084480.1 GCA_026427435.1_02561 CDS open 2571922-2572254 333_na     110_aa hypothetical protein
2562 CP084480.1 GCA_026427435.1_02562 CDS open 2572247-2573470 1224_na     407_aa ftsY Signal recognition particle receptor FtsY
2563 CP084480.1 GCA_026427435.1_02563 CDS open 2573467-2577036 3570_na     1189_aa smc Chromosome partition protein Smc
2564 CP084480.1 GCA_026427435.1_02564 CDS open 2577122-2577853 732_na     243_aa rnc Ribonuclease 3
2565 CP084480.1 GCA_026427435.1_02565 CDS open 2577972-2578205 234_na     77_aa acpP Acyl carrier protein
2566 CP084480.1 GCA_026427435.1_02566 CDS open 2578388-2579122 735_na     244_aa fabG_5 3-oxoacyl-[acyl-carrier-protein] reductase FabG
2567 CP084480.1 GCA_026427435.1_02567 CDS open 2579115-2580041 927_na     308_aa fabD Malonyl CoA-acyl carrier protein transacylase
2568 CP084480.1 GCA_026427435.1_02568 CDS open 2580034-2581020 987_na     328_aa plsX Phosphate acyltransferase
2569 CP084480.1 GCA_026427435.1_02569 CDS open 2581013-2581582 570_na     189_aa fapR Transcription factor FapR
2570 CP084480.1 GCA_026427435.1_02570 CDS open 2581698-2583743 2046_na     681_aa recG ATP-dependent DNA helicase RecG
2571 CP084480.1 GCA_026427435.1_02571 CDS open 2584020-2585675 1656_na     551_aa putative protein
2572 CP084480.1 GCA_026427435.1_02572 CDS open 2585689-2586063 375_na     124_aa putative protein
2573 CP084480.1 GCA_026427435.1_02573 CDS open 2586452-2586640 189_na     62_aa rpmB 50S ribosomal protein L28
2574 CP084480.1 GCA_026427435.1_02574 CDS open 2586766-2587407 642_na     213_aa thiN Thiamine pyrophosphokinase
2575 CP084480.1 GCA_026427435.1_02575 CDS open 2587414-2588058 645_na     214_aa rpe Ribulose-phosphate 3-epimerase
2576 CP084480.1 GCA_026427435.1_02576 CDS open 2588058-2588933 876_na     291_aa rsgA Small ribosomal subunit biogenesis GTPase RsgA
2577 CP084480.1 GCA_026427435.1_02577 CDS open 2589117-2591120 2004_na     667_aa prkC Serinethreonine-protein kinase PrkC
2578 CP084480.1 GCA_026427435.1_02578 CDS open 2591117-2591860 744_na     247_aa stp Serinethreonine phosphatase stp
2579 CP084480.1 GCA_026427435.1_02579 CDS open 2591867-2592961 1095_na     364_aa rlmN putative dual-specificity RNA methyltransferase RlmN
2580 CP084480.1 GCA_026427435.1_02580 CDS open 2592964-2594271 1308_na     435_aa rsmB Ribosomal RNA small subunit methyltransferase B
2581 CP084480.1 GCA_026427435.1_02581 CDS open 2594268-2595200 933_na     310_aa fmt Methionyl-tRNA formyltransferase
2582 CP084480.1 GCA_026427435.1_02582 CDS open 2595193-2595681 489_na     162_aa def1 Peptide deformylase 1
2583 CP084480.1 GCA_026427435.1_02583 CDS open 2596033-2598441 2409_na     802_aa priA primosomal protein N
2584 CP084480.1 GCA_026427435.1_02584 CDS open 2598441-2599157 717_na     238_aa coaBC Coenzyme A biosynthesis bifunctional protein CoaBC
2585 CP084481.1 GCA_026427435.1_02585 CDS open 1-960 960_na     319_aa hypothetical protein
2586 CP084481.1 GCA_026427435.1_02586 CDS open 987-1514 528_na     175_aa hypothetical protein
2587 CP084481.1 GCA_026427435.1_02587 CDS open 1613-1726 114_na     37_aa hypothetical protein
2588 CP084481.1 GCA_026427435.1_02588 CDS open 2155-2715 561_na     186_aa fas6 Cytokinin riboside 5-monophosphate phosphoribohydrolase
2589 CP084481.1 GCA_026427435.1_02589 CDS open 3112-3234 123_na     40_aa hypothetical protein
2590 CP084481.1 misc_RNA open 5179-5276 fstAT
2591 CP084481.1 GCA_026427435.1_02591 CDS open 5777-5884 108_na     35_aa hypothetical protein
2592 CP084481.1 GCA_026427435.1_02592 CDS open 6069-10133 4065_na     1354_aa hypothetical protein
2593 CP084481.1 GCA_026427435.1_02593 CDS open 10248-11864 1617_na     538_aa hypothetical protein
2594 CP084481.1 GCA_026427435.1_02594 CDS open 11954-12199 246_na     81_aa hypothetical protein
2595 CP084481.1 GCA_026427435.1_02595 CDS open 12885-13529 645_na     214_aa hypothetical protein
2596 CP084481.1 GCA_026427435.1_02596 CDS open 14160-14339 180_na     59_aa hypothetical protein
2597 CP084481.1 GCA_026427435.1_02597 CDS open 14607-15077 471_na     156_aa IS3 family transposase ISSau4
2598 CP084481.1 misc_RNA open 14881-14978 rli23
2599 CP084481.1 GCA_026427435.1_02599 CDS open 15106-16092 987_na     328_aa hypothetical protein
2600 CP084481.1 GCA_026427435.1_02600 CDS open 16668-17777 1110_na     369_aa hypothetical protein
2601 CP084481.1 GCA_026427435.1_02601 CDS open 17911-18519 609_na     202_aa bin3 Putative transposon Tn552 DNA-invertase bin3
2602 CP084481.1 GCA_026427435.1_02602 CDS open 18626-18715 90_na     29_aa hypothetical protein
2603 CP084481.1 GCA_026427435.1_02603 CDS open 18716-19276 561_na     186_aa qacR HTH-type transcriptional regulator QacR
2604 CP084481.1 GCA_026427435.1_02604 CDS open 19460-21004 1545_na     514_aa qacA Antiseptic resistance protein
2605 CP084481.1 GCA_026427435.1_02605 CDS open 21209-21769 561_na     186_aa hypothetical protein
2606 CP084481.1 GCA_026427435.1_02606 CDS open 22096-22296 201_na     66_aa hypothetical protein
2607 CP084481.1 GCA_026427435.1_02607 CDS open 22302-23096 795_na     264_aa soj Sporulation initiation inhibitor protein Soj
2608 CP084481.1 GCA_026427435.1_02608 CDS open 23748-24683 936_na     311_aa hypothetical protein
2609 CP084481.1 GCA_026427435.1_02609 CDS open 24674-25243 570_na     189_aa repB Replication protein RepB
2610 CP084481.1 GCA_026427435.1_02610 CDS open 25367-25969 603_na     200_aa hypothetical protein
2611 CP084481.1 GCA_026427435.1_02611 CDS open 25969-27045 1077_na     358_aa hypothetical protein
2612 CP084481.1 GCA_026427435.1_02612 CDS open 27045-27365 321_na     106_aa hypothetical protein
2613 CP084481.1 GCA_026427435.1_02613 CDS open 27514-28713 1200_na     399_aa hypothetical protein
2614 CP084481.1 GCA_026427435.1_02614 CDS open 28755-29570 816_na     271_aa hypothetical protein
2615 CP084481.1 GCA_026427435.1_02615 CDS open 30120-30671 552_na     183_aa toxN Endoribonuclease ToxN
2616 CP084481.1 GCA_026427435.1_02616 CDS open 30939-31466 528_na     175_aa IS4 family transposase ISBce8
2617 CP084481.1 GCA_026427435.1_02617 CDS open 31659-32315 657_na     218_aa hypothetical protein
2618 CP084481.1 GCA_026427435.1_02618 CDS open 32379-32588 210_na     69_aa copZ_2 Copper chaperone CopZ
2619 CP084481.1 GCA_026427435.1_02619 CDS open 32622-35009 2388_na     795_aa copA_2 Copper-exporting P-type ATPase
2620 CP084481.1 GCA_026427435.1_02620 CDS open 35024-35299 276_na     91_aa csoR_2 Copper-sensing transcriptional repressor CsoR
2621 CP084481.1 GCA_026427435.1_02621 CDS open 35474-35749 276_na     91_aa hypothetical protein
2622 CP084481.1 GCA_026427435.1_02622 CDS open 35790-36731 942_na     313_aa czcD_3 Cadmium%2C cobalt and zincH(+)-K(+) antiporter
2623 CP084481.1 GCA_026427435.1_02623 CDS open 37094-37582 489_na     162_aa hypothetical protein
2624 CP084481.1 GCA_026427435.1_02624 CDS open 37598-37900 303_na     100_aa hypothetical protein
2625 CP084481.1 GCA_026427435.1_02625 CDS open 37924-38598 675_na     224_aa IS6 family transposase IS431R
2626 CP084481.1 GCA_026427435.1_02626 CDS open 38771-39478 708_na     235_aa hypothetical protein
2627 CP084481.1 GCA_026427435.1_02627 CDS open 39665-40408 744_na     247_aa knt Kanamycin nucleotidyltransferase
2628 CP084481.1 GCA_026427435.1_02628 CDS open 40625-41029 405_na     134_aa ble Bleomycin resistance protein
2629 CP084481.1 GCA_026427435.1_02629 CDS open 41536-42798 1263_na     420_aa hypothetical protein
2630 CP084481.1 GCA_026427435.1_02630 CDS open 43269-43943 675_na     224_aa IS6 family transposase IS431R
2631 CP084482.1 misc_RNA open 610-704 ctRNA_pT181
2632 CP084482.1 GCA_026427435.1_02632 CDS open 756-962 207_na     68_aa hypothetical protein
2633 CP084482.1 GCA_026427435.1_02633 CDS open 1127-1606 480_na     159_aa hypothetical protein
2634 CP084482.1 GCA_026427435.1_02634 CDS open 1619-1789 171_na     56_aa hypothetical protein
2635 CP084482.1 GCA_026427435.1_02635 CDS open 1916-2095 180_na     59_aa hypothetical protein
2636 CP084482.1 GCA_026427435.1_02636 CDS open 2281-2796 516_na     171_aa hypothetical protein
2637 CP084482.1 GCA_026427435.1_02637 CDS open 2783-3634 852_na     283_aa hypothetical protein
2638 CP084482.1 GCA_026427435.1_02638 CDS open 3616-3999 384_na     127_aa hypothetical protein
2639 CP084482.1 GCA_026427435.1_02639 CDS open 4299-4583 285_na     94_aa repN Replication initiation protein
2640 CP084483.1 GCA_026427435.1_02640 CDS open 36-770 735_na     244_aa ermC rRNA adenine N-6-methyltransferase
2641 CP084483.1 GCA_026427435.1_02641 CDS open 1569-2045 477_na     158_aa hypothetical protein