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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_026427455.1)

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PROKKA Annotations for GCA_026427455.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
3 2676510 2487 19 1 61
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Annotation Table [page:6]    |    Number of Records Found: 2667 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CP084434.1 GCA_026427455.1_02501 CDS open 2498230-2499324 1095_na     364_aa potA_2 Spermidineputrescine import ATP-binding protein PotA
2502 CP084434.1 GCA_026427455.1_02502 CDS open 2499314-2500114 801_na     266_aa potB Spermidineputrescine transport system permease protein PotB
2503 CP084434.1 GCA_026427455.1_02503 CDS open 2500120-2500932 813_na     270_aa ydcV Inner membrane ABC transporter permease protein YdcV
2504 CP084434.1 GCA_026427455.1_02504 CDS open 2500929-2502002 1074_na     357_aa potD Spermidineputrescine-binding periplasmic protein
2505 CP084434.1 GCA_026427455.1_02505 CDS open 2502075-2503121 1047_na     348_aa hypothetical protein
2506 CP084434.1 GCA_026427455.1_02506 CDS open 2503253-2503708 456_na     151_aa hypothetical protein
2507 CP084434.1 GCA_026427455.1_02507 CDS open 2503971-2505323 1353_na     450_aa mntH_2 Divalent metal cation transporter MntH
2508 CP084434.1 GCA_026427455.1_02508 CDS open 2505585-2506196 612_na     203_aa hypothetical protein
2509 CP084434.1 GCA_026427455.1_02509 CDS open 2506379-2507194 816_na     271_aa cysQ_2 3(2)%2C5-bisphosphate nucleotidase CysQ
2510 CP084434.1 GCA_026427455.1_02510 CDS open 2507368-2507565 198_na     65_aa hypothetical protein
2511 CP084434.1 GCA_026427455.1_02511 CDS open 2507664-2509511 1848_na     615_aa typA GTP-binding protein TypABipA
2512 CP084434.1 GCA_026427455.1_02512 CDS open 2509557-2509811 255_na     84_aa hypothetical protein
2513 CP084434.1 GCA_026427455.1_02513 CDS open 2509813-2510298 486_na     161_aa hypothetical protein
2514 CP084434.1 GCA_026427455.1_02514 CDS open 2510442-2510720 279_na     92_aa hypothetical protein
2515 CP084434.1 GCA_026427455.1_02515 CDS open 2511021-2512259 1239_na     412_aa ftsW putative peptidoglycan glycosyltransferase FtsW
2516 CP084434.1 GCA_026427455.1_02516 CDS open 2512810-2516256 3447_na     1148_aa pycA Pyruvate carboxylase
2517 CP084434.1 misc_RNA open 2516380-2516559 S35
2518 CP084434.1 GCA_026427455.1_02518 CDS open 2516986-2517915 930_na     309_aa ctaA Heme A synthase
2519 CP084434.1 GCA_026427455.1_02519 CDS open 2518133-2519044 912_na     303_aa ctaB2 Protoheme IX farnesyltransferase 2
2520 CP084434.1 GCA_026427455.1_02520 CDS open 2519070-2519531 462_na     153_aa hypothetical protein
2521 CP084434.1 GCA_026427455.1_02521 CDS open 2519733-2520773 1041_na     346_aa hypothetical protein
2522 CP084434.1 GCA_026427455.1_02522 CDS open 2520790-2521224 435_na     144_aa hypothetical protein
2523 CP084434.1 GCA_026427455.1_02523 CDS open 2521312-2522238 927_na     308_aa hypothetical protein
2524 CP084434.1 GCA_026427455.1_02524 CDS open 2522397-2522648 252_na     83_aa hypothetical protein
2525 CP084434.1 GCA_026427455.1_02525 CDS open 2522665-2523054 390_na     129_aa hypothetical protein
2526 CP084434.1 GCA_026427455.1_02526 CDS open 2523123-2523674 552_na     183_aa rsmD Ribosomal RNA small subunit methyltransferase D
2527 CP084434.1 GCA_026427455.1_02527 CDS open 2523667-2524149 483_na     160_aa coaD Phosphopantetheine adenylyltransferase
2528 CP084434.1 GCA_026427455.1_02528 CDS open 2524221-2525354 1134_na     377_aa tmcAL tRNA(Met) cytidine acetate ligase
2529 CP084434.1 GCA_026427455.1_02529 CDS open 2525481-2526032 552_na     183_aa hypothetical protein
2530 CP084434.1 GCA_026427455.1_02530 CDS open 2526118-2526291 174_na     57_aa rpmF 50S ribosomal protein L32
2531 CP084434.1 GCA_026427455.1_02531 CDS open 2526546-2527286 741_na     246_aa rlmB 23S rRNA (guanosine-2-O-)-methyltransferase RlmB
2532 CP084434.1 GCA_026427455.1_02532 CDS open 2527678-2528736 1059_na     352_aa pheS Phenylalanine--tRNA ligase alpha subunit
2533 CP084434.1 GCA_026427455.1_02533 CDS open 2528736-2531138 2403_na     800_aa pheT Phenylalanine--tRNA ligase beta subunit
2534 CP084434.1 misc_RNA open 2531209-2531457 tsr24
2535 CP084434.1 GCA_026427455.1_02535 CDS open 2531626-2532558 933_na     310_aa rnhC Ribonuclease HIII
2536 CP084434.1 GCA_026427455.1_02536 CDS open 2532789-2533049 261_na     86_aa zapA Cell division protein ZapA
2537 CP084434.1 GCA_026427455.1_02537 CDS open 2533051-2533572 522_na     173_aa hypothetical protein
2538 CP084434.1 GCA_026427455.1_02538 CDS open 2533628-2535340 1713_na     570_aa polX DNA polymerase3-5 exonuclease PolX
2539 CP084434.1 GCA_026427455.1_02539 CDS open 2535350-2537701 2352_na     783_aa mutS2 Endonuclease MutS2
2540 CP084434.1 GCA_026427455.1_02540 CDS open 2537864-2538178 315_na     104_aa trxA Thioredoxin
2541 CP084434.1 GCA_026427455.1_02541 CDS open 2538268-2540046 1779_na     592_aa uvrC UvrABC system protein C
2542 CP084434.1 GCA_026427455.1_02542 CDS open 2540391-2541005 615_na     204_aa sdhC Succinate dehydrogenase cytochrome b558 subunit
2543 CP084434.1 GCA_026427455.1_02543 CDS open 2541057-2542823 1767_na     588_aa frdA Fumarate reductase flavoprotein subunit
2544 CP084434.1 GCA_026427455.1_02544 CDS open 2542823-2543659 837_na     278_aa frdB Fumarate reductase iron-sulfur subunit
2545 CP084434.1 GCA_026427455.1_02545 CDS open 2544066-2544866 801_na     266_aa murI Glutamate racemase
2546 CP084434.1 GCA_026427455.1_02546 CDS open 2544878-2545459 582_na     193_aa dITPXTP pyrophosphatase
2547 CP084434.1 GCA_026427455.1_02547 CDS open 2545459-2545968 510_na     169_aa hypothetical protein
2548 CP084434.1 GCA_026427455.1_02548 CDS open 2546137-2546829 693_na     230_aa yfnB Putative HAD-hydrolase YfnB
2549 CP084434.1 tRNA open 2547076-2547150 tRNA-Arg(tct)
2550 CP084434.1 GCA_026427455.1_02550 CDS open 2547618-2548064 447_na     148_aa putative N-acetyltransferase
2551 CP084434.1 GCA_026427455.1_02551 CDS open 2548238-2549851 1614_na     537_aa bshC Putative cysteine ligase BshC
2552 CP084434.1 GCA_026427455.1_02552 CDS open 2549995-2550426 432_na     143_aa mraZ Transcriptional regulator MraZ
2553 CP084434.1 GCA_026427455.1_02553 CDS open 2550441-2551376 936_na     311_aa rsmH_2 Ribosomal RNA small subunit methyltransferase H
2554 CP084434.1 GCA_026427455.1_02554 CDS open 2551390-2551791 402_na     133_aa ftsL Cell division protein FtsL
2555 CP084434.1 GCA_026427455.1_02555 CDS open 2551769-2554066 2298_na     765_aa pbpB Penicillin-binding protein 2B
2556 CP084434.1 GCA_026427455.1_02556 CDS open 2554426-2555391 966_na     321_aa mraY Phospho-N-acetylmuramoyl-pentapeptide-transferase
2557 CP084434.1 GCA_026427455.1_02557 CDS open 2555393-2556742 1350_na     449_aa murD UDP-N-acetylmuramoylalanine--D-glutamate ligase
2558 CP084434.1 GCA_026427455.1_02558 CDS open 2556758-2558032 1275_na     424_aa divIB Cell division protein DivIB
2559 CP084434.1 GCA_026427455.1_02559 CDS open 2558135-2559544 1410_na     469_aa ftsA Cell division protein FtsA
2560 CP084434.1 GCA_026427455.1_02560 CDS open 2559574-2560755 1182_na     393_aa ftsZ Cell division protein FtsZ
2561 CP084434.1 GCA_026427455.1_02561 CDS open 2560912-2561703 792_na     263_aa Polyphenol oxidase
2562 CP084434.1 GCA_026427455.1_02562 CDS open 2561722-2562390 669_na     222_aa Pyridoxal phosphate homeostasis protein
2563 CP084434.1 GCA_026427455.1_02563 CDS open 2562404-2562982 579_na     192_aa sepF Cell division protein SepF
2564 CP084434.1 GCA_026427455.1_02564 CDS open 2562994-2563290 297_na     98_aa hypothetical protein
2565 CP084434.1 GCA_026427455.1_02565 CDS open 2563353-2564147 795_na     264_aa hypothetical protein
2566 CP084434.1 GCA_026427455.1_02566 CDS open 2564171-2564803 633_na     210_aa hypothetical protein
2567 CP084434.1 GCA_026427455.1_02567 CDS open 2565032-2567782 2751_na     916_aa ileS Isoleucine--tRNA ligase
2568 CP084434.1 GCA_026427455.1_02568 CDS open 2568158-2568955 798_na     265_aa hypothetical protein
2569 CP084434.1 GCA_026427455.1_02569 CDS open 2569262-2569735 474_na     157_aa lspA Lipoprotein signal peptidase
2570 CP084434.1 GCA_026427455.1_02570 CDS open 2569749-2570666 918_na     305_aa rluD Ribosomal large subunit pseudouridine synthase D
2571 CP084434.1 GCA_026427455.1_02571 CDS open 2570971-2571498 528_na     175_aa pyrR Bifunctional protein PyrR
2572 CP084434.1 GCA_026427455.1_02572 CDS open 2571802-2573097 1296_na     431_aa pyrP Uracil permease
2573 CP084434.1 GCA_026427455.1_02573 CDS open 2573118-2574017 900_na     299_aa pyrB Aspartate carbamoyltransferase
2574 CP084434.1 GCA_026427455.1_02574 CDS open 2574017-2575291 1275_na     424_aa pyrC Dihydroorotase
2575 CP084434.1 GCA_026427455.1_02575 CDS open 2575293-2576393 1101_na     366_aa carA Carbamoyl-phosphate synthase small chain
2576 CP084434.1 GCA_026427455.1_02576 CDS open 2576386-2579559 3174_na     1057_aa carB Carbamoyl-phosphate synthase large chain
2577 CP084434.1 GCA_026427455.1_02577 CDS open 2579736-2580428 693_na     230_aa pyrF Orotidine 5-phosphate decarboxylase
2578 CP084434.1 GCA_026427455.1_02578 CDS open 2580429-2581040 612_na     203_aa pyrE Orotate phosphoribosyltransferase
2579 CP084434.1 GCA_026427455.1_02579 CDS open 2581068-2581298 231_na     76_aa hypothetical protein
2580 CP084434.1 GCA_026427455.1_02580 CDS open 2581626-2582048 423_na     140_aa hypothetical protein
2581 CP084434.1 GCA_026427455.1_02581 CDS open 2582236-2583933 1698_na     565_aa rqcH Rqc2 RqcH
2582 CP084434.1 GCA_026427455.1_02582 CDS open 2584093-2584716 624_na     207_aa gmk Guanylate kinase
2583 CP084434.1 GCA_026427455.1_02583 CDS open 2584716-2584928 213_na     70_aa rpoZ DNA-directed RNA polymerase subunit omega
2584 CP084434.1 GCA_026427455.1_02584 CDS open 2585155-2586354 1200_na     399_aa coaBC Coenzyme A biosynthesis bifunctional protein CoaBC
2585 CP084434.1 GCA_026427455.1_02585 CDS open 2586354-2588762 2409_na     802_aa priA primosomal protein N
2586 CP084434.1 GCA_026427455.1_02586 CDS open 2589114-2589602 489_na     162_aa def1 Peptide deformylase 1
2587 CP084434.1 GCA_026427455.1_02587 CDS open 2589595-2590527 933_na     310_aa fmt Methionyl-tRNA formyltransferase
2588 CP084434.1 GCA_026427455.1_02588 CDS open 2590524-2591831 1308_na     435_aa rsmB Ribosomal RNA small subunit methyltransferase B
2589 CP084434.1 GCA_026427455.1_02589 CDS open 2591834-2592928 1095_na     364_aa rlmN putative dual-specificity RNA methyltransferase RlmN
2590 CP084434.1 GCA_026427455.1_02590 CDS open 2592935-2593678 744_na     247_aa stp Serinethreonine phosphatase stp
2591 CP084434.1 GCA_026427455.1_02591 CDS open 2593675-2595678 2004_na     667_aa prkC Serinethreonine-protein kinase PrkC
2592 CP084434.1 GCA_026427455.1_02592 CDS open 2595862-2596737 876_na     291_aa rsgA Small ribosomal subunit biogenesis GTPase RsgA
2593 CP084434.1 GCA_026427455.1_02593 CDS open 2596737-2597381 645_na     214_aa rpe Ribulose-phosphate 3-epimerase
2594 CP084434.1 GCA_026427455.1_02594 CDS open 2597388-2598029 642_na     213_aa thiN Thiamine pyrophosphokinase
2595 CP084434.1 GCA_026427455.1_02595 CDS open 2598155-2598343 189_na     62_aa rpmB 50S ribosomal protein L28
2596 CP084434.1 GCA_026427455.1_02596 CDS open 2598732-2599106 375_na     124_aa putative protein
2597 CP084434.1 GCA_026427455.1_02597 CDS open 2599120-2600775 1656_na     551_aa putative protein
2598 CP084434.1 GCA_026427455.1_02598 CDS open 2601052-2603097 2046_na     681_aa recG ATP-dependent DNA helicase RecG
2599 CP084434.1 GCA_026427455.1_02599 CDS open 2603213-2603782 570_na     189_aa fapR Transcription factor FapR
2600 CP084434.1 GCA_026427455.1_02600 CDS open 2603775-2604761 987_na     328_aa plsX Phosphate acyltransferase
2601 CP084434.1 GCA_026427455.1_02601 CDS open 2604754-2605680 927_na     308_aa fabD Malonyl CoA-acyl carrier protein transacylase
2602 CP084434.1 GCA_026427455.1_02602 CDS open 2605673-2606407 735_na     244_aa fabG_5 3-oxoacyl-[acyl-carrier-protein] reductase FabG
2603 CP084434.1 GCA_026427455.1_02603 CDS open 2606590-2606823 234_na     77_aa acpP Acyl carrier protein
2604 CP084434.1 GCA_026427455.1_02604 CDS open 2606942-2607673 732_na     243_aa rnc Ribonuclease 3
2605 CP084434.1 GCA_026427455.1_02605 CDS open 2607759-2611328 3570_na     1189_aa smc Chromosome partition protein Smc
2606 CP084434.1 GCA_026427455.1_02606 CDS open 2611325-2612548 1224_na     407_aa ftsY Signal recognition particle receptor FtsY
2607 CP084434.1 GCA_026427455.1_02607 CDS open 2612541-2612873 333_na     110_aa hypothetical protein
2608 CP084434.1 GCA_026427455.1_02608 CDS open 2612891-2614258 1368_na     455_aa ffh Signal recognition particle protein
2609 CP084434.1 GCA_026427455.1_02609 CDS open 2614558-2615940 1383_na     460_aa yhfT putative acyl--CoA ligase YhfT
2610 CP084434.1 GCA_026427455.1_02610 CDS open 2615937-2617082 1146_na     381_aa yhfS Putative acetyl-CoA C-acetyltransferase YhfS
2611 CP084434.1 GCA_026427455.1_02611 CDS open 2617051-2617425 375_na     124_aa hypothetical protein
2612 CP084434.1 GCA_026427455.1_02612 CDS open 2617415-2617675 261_na     86_aa hypothetical protein
2613 CP084434.1 GCA_026427455.1_02613 CDS open 2617890-2618165 276_na     91_aa rpsP 30S ribosomal protein S16
2614 CP084434.1 GCA_026427455.1_02614 CDS open 2618295-2618795 501_na     166_aa rimM Ribosome maturation factor RimM
2615 CP084434.1 GCA_026427455.1_02615 CDS open 2618795-2619532 738_na     245_aa trmD tRNA (guanine-N(1)-)-methyltransferase
2616 CP084434.1 misc_RNA open 2619576-2619618 L19_leader
2617 CP084435.1 GCA_026427455.1_02617 CDS open 1318-1824 507_na     168_aa hypothetical protein
2618 CP084435.1 GCA_026427455.1_02618 CDS open 1826-3370 1545_na     514_aa asp2 Accessory Sec system protein Asp2
2619 CP084435.1 GCA_026427455.1_02619 CDS open 3363-4919 1557_na     518_aa asp1 Accessory Sec system protein Asp1
2620 CP084435.1 GCA_026427455.1_02620 CDS open 4933-6126 1194_na     397_aa secY_2 Protein translocase subunit SecY
2621 CP084435.1 GCA_026427455.1_02621 CDS open 6493-10557 4065_na     1354_aa hypothetical protein
2622 CP084435.1 GCA_026427455.1_02622 CDS open 12647-12859 213_na     70_aa hypothetical protein
2623 CP084435.1 GCA_026427455.1_02623 CDS open 12900-13058 159_na     52_aa hypothetical protein
2624 CP084435.1 GCA_026427455.1_02624 CDS open 13133-13639 507_na     168_aa IS1182 family transposase ISSep1
2625 CP084435.1 GCA_026427455.1_02625 CDS open 13807-14091 285_na     94_aa hypothetical protein
2626 CP084435.1 GCA_026427455.1_02626 CDS open 14122-14286 165_na     54_aa IS1182 family transposase ISSep1
2627 CP084435.1 misc_RNA open 14569-14779 tsr24
2628 CP084435.1 GCA_026427455.1_02628 CDS open 14839-15852 1014_na     337_aa hypothetical protein
2629 CP084435.1 GCA_026427455.1_02629 CDS open 16437-17228 792_na     263_aa soj Sporulation initiation inhibitor protein Soj
2630 CP084435.1 GCA_026427455.1_02630 CDS open 17238-17480 243_na     80_aa hypothetical protein
2631 CP084435.1 GCA_026427455.1_02631 CDS open 18552-18662 111_na     36_aa hypothetical protein
2632 CP084435.1 misc_RNA open 20224-20318 fstAT
2633 CP084435.1 GCA_026427455.1_02633 CDS open 20544-21062 519_na     172_aa putative protein
2634 CP084435.1 GCA_026427455.1_02634 CDS open 21151-21786 636_na     211_aa 3-hexulose-6-phosphate synthase
2635 CP084435.1 GCA_026427455.1_02635 CDS open 21889-22227 339_na     112_aa hxlR HTH-type transcriptional activator HxlR
2636 CP084435.1 GCA_026427455.1_02636 CDS open 22321-22995 675_na     224_aa IS6 family transposase IS431R
2637 CP084435.1 GCA_026427455.1_02637 CDS open 23033-23152 120_na     39_aa hypothetical protein
2638 CP084435.1 GCA_026427455.1_02638 CDS open 23196-23645 450_na     149_aa IS6 family transposase IS431mec
2639 CP084435.1 GCA_026427455.1_02639 CDS open 23953-24570 618_na     205_aa hypothetical protein
2640 CP084435.1 GCA_026427455.1_02640 CDS open 24589-24936 348_na     115_aa cadC Cadmium resistance transcriptional regulatory protein CadC
2641 CP084435.1 misc_RNA open 25147-25247 fstAT
2642 CP084435.1 GCA_026427455.1_02642 CDS open 25498-26319 822_na     273_aa cysL HTH-type transcriptional regulator CysL
2643 CP084435.1 GCA_026427455.1_02643 CDS open 26444-27439 996_na     331_aa hypothetical protein
2644 CP084435.1 GCA_026427455.1_02644 CDS open 27759-28367 609_na     202_aa bin3_1 Putative transposon Tn552 DNA-invertase bin3
2645 CP084435.1 GCA_026427455.1_02645 CDS open 28744-28899 156_na     51_aa hypothetical protein
2646 CP084435.1 GCA_026427455.1_02646 CDS open 28997-29671 675_na     224_aa IS6 family transposase IS431R
2647 CP084435.1 GCA_026427455.1_02647 CDS open 29736-31076 1341_na     446_aa gtfB UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase stabilizing protein GtfB
2648 CP084435.1 GCA_026427455.1_02648 CDS open 31069-32580 1512_na     503_aa gtfA_3 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase GtfA subunit
2649 CP084435.1 GCA_026427455.1_02649 CDS open 32598-33677 1080_na     359_aa secA Protein translocase subunit SecA
2650 CP084436.1 GCA_026427455.1_02650 CDS open 3082-3831 750_na     249_aa hypothetical protein
2651 CP084436.1 misc_RNA open 4000-4089 fstAT
2652 CP084436.1 GCA_026427455.1_02652 CDS open 4440-4889 450_na     149_aa hypothetical protein
2653 CP084436.1 GCA_026427455.1_02653 CDS open 5099-5773 675_na     224_aa IS6 family transposase IS257R2
2654 CP084436.1 GCA_026427455.1_02654 CDS open 6212-6595 384_na     127_aa hypothetical protein
2655 CP084436.1 GCA_026427455.1_02655 CDS open 6577-6786 210_na     69_aa hypothetical protein
2656 CP084436.1 GCA_026427455.1_02656 CDS open 6770-7783 1014_na     337_aa hypothetical protein
2657 CP084436.1 GCA_026427455.1_02657 CDS open 7821-8291 471_na     156_aa hypothetical protein
2658 CP084436.1 GCA_026427455.1_02658 CDS open 8398-8559 162_na     53_aa hypothetical protein
2659 CP084436.1 GCA_026427455.1_02659 CDS open 9292-10155 864_na     287_aa hypothetical protein
2660 CP084436.1 GCA_026427455.1_02660 CDS open 10407-11081 675_na     224_aa IS6 family transposase IS257R1
2661 CP084436.1 GCA_026427455.1_02661 CDS open 11123-11323 201_na     66_aa hypothetical protein
2662 CP084436.1 GCA_026427455.1_02662 CDS open 11752-12519 768_na     255_aa hypothetical protein
2663 CP084436.1 GCA_026427455.1_02663 CDS open 13283-13423 141_na     46_aa hypothetical protein
2664 CP084436.1 GCA_026427455.1_02664 CDS open 13528-13626 99_na     32_aa hypothetical protein
2665 CP084436.1 GCA_026427455.1_02665 CDS open 13741-20322 6582_na     2193_aa hypothetical protein
2666 CP084436.1 GCA_026427455.1_02666 CDS open 20692-21294 603_na     200_aa bin3_2 Putative transposon Tn552 DNA-invertase bin3
2667 CP084436.1 GCA_026427455.1_02667 CDS open 21929-22858 930_na     309_aa hypothetical protein