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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_026427515.1)

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PROKKA Annotations for GCA_026427515.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
1 2622429 2440 16 1 60
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Annotation Table [page:6]    |    Number of Records Found: 2603 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CP084443.1 GCA_026427515.1_02501 CDS open 2520094-2520705 612_na     203_aa hypothetical protein
2502 CP084443.1 GCA_026427515.1_02502 CDS open 2520761-2521972 1212_na     403_aa putative oxidoreductase
2503 CP084443.1 GCA_026427515.1_02503 CDS open 2522190-2523194 1005_na     334_aa hypothetical protein
2504 CP084443.1 GCA_026427515.1_02504 CDS open 2523216-2523548 333_na     110_aa Glycine cleavage system H-like protein
2505 CP084443.1 GCA_026427515.1_02505 CDS open 2523549-2524346 798_na     265_aa Protein-ADP-ribose hydrolase
2506 CP084443.1 GCA_026427515.1_02506 CDS open 2524336-2525226 891_na     296_aa Protein ADP-ribosyltransferase
2507 CP084443.1 GCA_026427515.1_02507 CDS open 2525238-2526260 1023_na     340_aa Lipoate--protein ligase 2
2508 CP084443.1 GCA_026427515.1_02508 CDS open 2526518-2526859 342_na     113_aa hypothetical protein
2509 CP084443.1 GCA_026427515.1_02509 CDS open 2526872-2527063 192_na     63_aa hypothetical protein
2510 CP084443.1 GCA_026427515.1_02510 CDS open 2527081-2527290 210_na     69_aa hypothetical protein
2511 CP084443.1 GCA_026427515.1_02511 CDS open 2527275-2527715 441_na     146_aa hypothetical protein
2512 CP084443.1 GCA_026427515.1_02512 CDS open 2527831-2528217 387_na     128_aa hypothetical protein
2513 CP084443.1 GCA_026427515.1_02513 CDS open 2528391-2529311 921_na     306_aa hypothetical protein
2514 CP084443.1 GCA_026427515.1_02514 CDS open 2529460-2530788 1329_na     442_aa potE Putrescine transporter PotE
2515 CP084443.1 GCA_026427515.1_02515 CDS open 2530803-2532971 2169_na     722_aa odcI Inducible ornithine decarboxylase
2516 CP084443.1 GCA_026427515.1_02516 CDS open 2533775-2534551 777_na     258_aa yidC_3 Membrane protein insertase YidC
2517 CP084443.1 GCA_026427515.1_02517 CDS open 2534553-2535659 1107_na     368_aa hypothetical protein
2518 CP084443.1 GCA_026427515.1_02518 CDS open 2535887-2536120 234_na     77_aa hypothetical protein
2519 CP084443.1 GCA_026427515.1_02519 CDS open 2536436-2536801 366_na     121_aa hypothetical protein
2520 CP084443.1 misc_RNA open 2536929-2537029 TPP
2521 CP084443.1 GCA_026427515.1_02521 CDS open 2537129-2538043 915_na     304_aa thiY Formylaminopyrimidine-binding protein
2522 CP084443.1 GCA_026427515.1_02522 CDS open 2538208-2539146 939_na     312_aa yvyI Putative mannose-6-phosphate isomerase YvyI
2523 CP084443.1 GCA_026427515.1_02523 CDS open 2539162-2541111 1950_na     649_aa manP PTS system mannose-specific EIIBCA component
2524 CP084443.1 GCA_026427515.1_02524 CDS open 2541191-2543050 1860_na     619_aa manR_2 Transcriptional regulator ManR
2525 CP084443.1 GCA_026427515.1_02525 CDS open 2543282-2544055 774_na     257_aa hypothetical protein
2526 CP084443.1 misc_RNA open 2544227-2544440 S35
2527 CP084443.1 GCA_026427515.1_02527 CDS open 2544439-2544768 330_na     109_aa hypothetical protein
2528 CP084443.1 GCA_026427515.1_02528 CDS open 2545384-2546148 765_na     254_aa hypothetical protein
2529 CP084443.1 GCA_026427515.1_02529 CDS open 2546138-2546476 339_na     112_aa hypothetical protein
2530 CP084443.1 GCA_026427515.1_02530 CDS open 2546622-2547911 1290_na     429_aa pdhC_3 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
2531 CP084443.1 GCA_026427515.1_02531 CDS open 2547929-2548969 1041_na     346_aa acoB Acetoin:2%2C6-dichlorophenolindophenol oxidoreductase subunit beta
2532 CP084443.1 GCA_026427515.1_02532 CDS open 2548985-2549932 948_na     315_aa acoA Acetoin:2%2C6-dichlorophenolindophenol oxidoreductase subunit alpha
2533 CP084443.1 GCA_026427515.1_02533 CDS open 2550021-2551373 1353_na     450_aa lpd_2 Dihydrolipoyl dehydrogenase
2534 CP084443.1 GCA_026427515.1_02534 CDS open 2551877-2552179 303_na     100_aa hypothetical protein
2535 CP084443.1 GCA_026427515.1_02535 CDS open 2552683-2553882 1200_na     399_aa patB Cystathionine beta-lyase PatB
2536 CP084443.1 GCA_026427515.1_02536 CDS open 2554396-2554908 513_na     170_aa hypothetical protein
2537 CP084443.1 GCA_026427515.1_02537 CDS open 2555204-2556124 921_na     306_aa apbE FAD:protein FMN transferase
2538 CP084443.1 GCA_026427515.1_02538 CDS open 2556202-2559234 3033_na     1010_aa namA NADPH dehydrogenase
2539 CP084443.1 GCA_026427515.1_02539 CDS open 2559241-2560623 1383_na     460_aa norB_3 Quinolone resistance protein NorB
2540 CP084443.1 misc_RNA open 2560639-2560858 S35
2541 CP084443.1 GCA_026427515.1_02541 CDS open 2561113-2561685 573_na     190_aa ykoE_2 Putative HMPthiamine permease protein YkoE
2542 CP084443.1 misc_RNA open 2561822-2561920 TPP
2543 CP084443.1 misc_RNA open 2562018-2562117 TPP
2544 CP084443.1 GCA_026427515.1_02544 CDS open 2562189-2563256 1068_na     355_aa hypothetical protein
2545 CP084443.1 GCA_026427515.1_02545 CDS open 2563269-2564702 1434_na     477_aa luxC Long-chain acyl-protein thioester reductase
2546 CP084443.1 GCA_026427515.1_02546 CDS open 2564726-2565493 768_na     255_aa fabG_4 3-oxoacyl-[acyl-carrier-protein] reductase FabG
2547 CP084443.1 GCA_026427515.1_02547 CDS open 2565699-2567234 1536_na     511_aa ptsG_2 PTS system glucose-specific EIICBA component
2548 CP084443.1 GCA_026427515.1_02548 CDS open 2567494-2568060 567_na     188_aa hypothetical protein
2549 CP084443.1 GCA_026427515.1_02549 CDS open 2568164-2568919 756_na     251_aa fabG_5 3-oxoacyl-[acyl-carrier-protein] reductase FabG
2550 CP084443.1 GCA_026427515.1_02550 CDS open 2569057-2569854 798_na     265_aa nhoA Arylamine N-acetyltransferase N-hydroxyarylamine O-acetyltransferase
2551 CP084443.1 GCA_026427515.1_02551 CDS open 2570226-2570495 270_na     89_aa hypothetical protein
2552 CP084443.1 GCA_026427515.1_02552 CDS open 2570559-2570879 321_na     106_aa hypothetical protein
2553 CP084443.1 GCA_026427515.1_02553 CDS open 2570898-2572241 1344_na     447_aa csbC putative metabolite transport protein CsbC
2554 CP084443.1 GCA_026427515.1_02554 CDS open 2572357-2572878 522_na     173_aa hypothetical protein
2555 CP084443.1 GCA_026427515.1_02555 CDS open 2572921-2574327 1407_na     468_aa hypothetical protein
2556 CP084443.1 misc_RNA open 2574512-2574867 tsr24
2557 CP084443.1 GCA_026427515.1_02557 CDS open 2574647-2574766 120_na     39_aa hypothetical protein
2558 CP084443.1 GCA_026427515.1_02558 CDS open 2575206-2575721 516_na     171_aa hypothetical protein
2559 CP084443.1 GCA_026427515.1_02559 CDS open 2575910-2576677 768_na     255_aa hypothetical protein
2560 CP084443.1 GCA_026427515.1_02560 CDS open 2576679-2577374 696_na     231_aa bcrA_4 Bacitracin transport ATP-binding protein BcrA
2561 CP084443.1 GCA_026427515.1_02561 CDS open 2577653-2578174 522_na     173_aa isaB Immunodominant staphylococcal antigen B
2562 CP084443.1 GCA_026427515.1_02562 CDS open 2578372-2578851 480_na     159_aa hypothetical protein
2563 CP084443.1 GCA_026427515.1_02563 CDS open 2578980-2580620 1641_na     546_aa ipdC Indole-3-pyruvate decarboxylase
2564 CP084443.1 GCA_026427515.1_02564 CDS open 2580810-2581433 624_na     207_aa nikE_2 Nickel import ATP-binding protein NikE
2565 CP084443.1 GCA_026427515.1_02565 CDS open 2581420-2582136 717_na     238_aa cntD_2 Metal-staphylopine import system ATP-binding protein CntD
2566 CP084443.1 GCA_026427515.1_02566 CDS open 2582160-2582930 771_na     256_aa nikC_2 Nickel import system permease protein NikC
2567 CP084443.1 GCA_026427515.1_02567 CDS open 2582927-2583877 951_na     316_aa nikB Nickel transport system permease protein NikB
2568 CP084443.1 GCA_026427515.1_02568 CDS open 2583877-2585430 1554_na     517_aa cntA_3 Metal-staphylopine-binding protein CntA
2569 CP084443.1 GCA_026427515.1_02569 CDS open 2585436-2586119 684_na     227_aa hypothetical protein
2570 CP084443.1 GCA_026427515.1_02570 CDS open 2586495-2587091 597_na     198_aa hypothetical protein
2571 CP084443.1 GCA_026427515.1_02571 CDS open 2587116-2588612 1497_na     498_aa hypothetical protein
2572 CP084443.1 GCA_026427515.1_02572 CDS open 2588891-2590057 1167_na     388_aa hypothetical protein
2573 CP084443.1 GCA_026427515.1_02573 CDS open 2590054-2590974 921_na     306_aa hypothetical protein
2574 CP084443.1 GCA_026427515.1_02574 CDS open 2590989-2591660 672_na     223_aa lnrL_2 Linearmycin resistance ATP-binding protein LnrL
2575 CP084443.1 GCA_026427515.1_02575 CDS open 2591787-2592260 474_na     157_aa hypothetical protein
2576 CP084443.1 GCA_026427515.1_02576 CDS open 2592295-2593236 942_na     313_aa hypothetical protein
2577 CP084443.1 GCA_026427515.1_02577 CDS open 2593681-2594853 1173_na     390_aa ynfM Inner membrane transport protein YnfM
2578 CP084443.1 GCA_026427515.1_02578 CDS open 2595026-2596531 1506_na     501_aa crtN 4%2C4-diapophytoene desaturase (4%2C4-diaponeurosporene-forming)
2579 CP084443.1 GCA_026427515.1_02579 CDS open 2596534-2597397 864_na     287_aa crtM 4%2C4-diapophytoene synthase
2580 CP084443.1 GCA_026427515.1_02580 CDS open 2597433-2598551 1119_na     372_aa crtQ 4%2C4-diaponeurosporenoate glycosyltransferase
2581 CP084443.1 GCA_026427515.1_02581 CDS open 2598553-2600052 1500_na     499_aa crtP 4%2C4-diaponeurosporene oxygenase
2582 CP084443.1 GCA_026427515.1_02582 CDS open 2600064-2600546 483_na     160_aa hypothetical protein
2583 CP084443.1 GCA_026427515.1_02583 CDS open 2600539-2601039 501_na     166_aa crtK-2 Tryptophan-rich protein TspO
2584 CP084443.1 GCA_026427515.1_02584 CDS open 2601241-2602446 1206_na     401_aa hypothetical protein
2585 CP084443.1 GCA_026427515.1_02585 CDS open 2602624-2604321 1698_na     565_aa cocE Cocaine esterase
2586 CP084443.1 GCA_026427515.1_02586 CDS open 2604476-2605051 576_na     191_aa hypothetical protein
2587 CP084443.1 GCA_026427515.1_02587 CDS open 2605107-2605307 201_na     66_aa cspLA Cold shock-like protein CspLA
2588 CP084443.1 GCA_026427515.1_02588 CDS open 2605556-2606329 774_na     257_aa budC Diacetyl reductase [(S)-acetoin forming]
2589 CP084443.1 GCA_026427515.1_02589 CDS open 2606544-2606708 165_na     54_aa hypothetical protein
2590 CP084443.1 GCA_026427515.1_02590 CDS open 2606705-2607412 708_na     235_aa hypothetical protein
2591 CP084443.1 GCA_026427515.1_02591 CDS open 2607412-2608230 819_na     272_aa cysA_2 Sulfatethiosulfate import ATP-binding protein CysA
2592 CP084443.1 GCA_026427515.1_02592 CDS open 2608381-2609673 1293_na     430_aa arsB Arsenical pump membrane protein
2593 CP084443.1 GCA_026427515.1_02593 CDS open 2609670-2609987 318_na     105_aa hypothetical protein
2594 CP084443.1 GCA_026427515.1_02594 CDS open 2610111-2610866 756_na     251_aa pflA Pyruvate formate-lyase-activating enzyme
2595 CP084443.1 GCA_026427515.1_02595 CDS open 2610888-2613134 2247_na     748_aa pflB Formate acetyltransferase
2596 CP084443.1 GCA_026427515.1_02596 CDS open 2613448-2614017 570_na     189_aa hypothetical protein
2597 CP084443.1 GCA_026427515.1_02597 CDS open 2614374-2615405 1032_na     343_aa arnA Bifunctional polymyxin resistance protein ArnA
2598 CP084443.1 GCA_026427515.1_02598 CDS open 2615581-2618067 2487_na     828_aa ydgH Putative membrane protein YdgH
2599 CP084443.1 GCA_026427515.1_02599 CDS open 2618301-2618897 597_na     198_aa hypothetical protein
2600 CP084443.1 misc_RNA open 2619111-2619293 S35
2601 CP084443.1 GCA_026427515.1_02601 CDS open 2619288-2620523 1236_na     411_aa hypothetical protein
2602 CP084443.1 GCA_026427515.1_02602 CDS open 2620722-2621837 1116_na     371_aa hypothetical protein
2603 CP084443.1 GCA_026427515.1_02603 CDS open 2621959-2622369 411_na     136_aa ybbA putative protein YbbA