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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_026427535.1)

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PROKKA Annotations for GCA_026427535.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
3 2634289 2455 19 1 61
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Annotation Table [page:6]    |    Number of Records Found: 2625 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CP084444.1 GCA_026427535.1_02501 CDS open 2498853-2499719 867_na     288_aa hypothetical protein
2502 CP084444.1 GCA_026427535.1_02502 CDS open 2499720-2501480 1761_na     586_aa korA 2-oxoglutarate oxidoreductase subunit KorA
2503 CP084444.1 GCA_026427535.1_02503 CDS open 2501614-2502402 789_na     262_aa ymdB 2%2C3-cyclic-nucleotide 2-phosphodiesterase
2504 CP084444.1 GCA_026427535.1_02504 CDS open 2502558-2502776 219_na     72_aa hypothetical protein
2505 CP084444.1 GCA_026427535.1_02505 CDS open 2503133-2504692 1560_na     519_aa rny Ribonuclease Y
2506 CP084444.1 GCA_026427535.1_02506 CDS open 2504961-2506007 1047_na     348_aa recA Protein RecA
2507 CP084444.1 GCA_026427535.1_02507 CDS open 2506181-2507323 1143_na     380_aa cinA Putative competence-damage inducible protein
2508 CP084444.1 GCA_026427535.1_02508 CDS open 2507494-2508069 576_na     191_aa pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
2509 CP084444.1 GCA_026427535.1_02509 CDS open 2508091-2508483 393_na     130_aa hypothetical protein
2510 CP084444.1 GCA_026427535.1_02510 CDS open 2508505-2509338 834_na     277_aa hypothetical protein
2511 CP084444.1 GCA_026427535.1_02511 CDS open 2509436-2510140 705_na     234_aa fabG_4 3-oxoacyl-[acyl-carrier-protein] reductase FabG
2512 CP084444.1 GCA_026427535.1_02512 CDS open 2510137-2511429 1293_na     430_aa hypothetical protein
2513 CP084444.1 GCA_026427535.1_02513 CDS open 2511422-2512690 1269_na     422_aa hypothetical protein
2514 CP084444.1 GCA_026427535.1_02514 CDS open 2512769-2513503 735_na     244_aa phnF putative transcriptional regulator PhnF
2515 CP084444.1 GCA_026427535.1_02515 CDS open 2513507-2515876 2370_na     789_aa ftsK DNA translocase FtsK
2516 CP084444.1 GCA_026427535.1_02516 CDS open 2516151-2517824 1674_na     557_aa rnj2 Ribonuclease J 2
2517 CP084444.1 GCA_026427535.1_02517 CDS open 2518008-2520104 2097_na     698_aa pnp Polyribonucleotide nucleotidyltransferase
2518 CP084444.1 misc_RNA open 2519924-2520252 rliD
2519 CP084444.1 GCA_026427535.1_02519 CDS open 2520240-2520509 270_na     89_aa rpsO 30S ribosomal protein S15
2520 CP084444.1 GCA_026427535.1_02520 CDS open 2520623-2521594 972_na     323_aa ribF Bifunctional riboflavin kinaseFMN adenylyltransferase
2521 CP084444.1 GCA_026427535.1_02521 CDS open 2521608-2522525 918_na     305_aa truB tRNA pseudouridine synthase B
2522 CP084444.1 GCA_026427535.1_02522 CDS open 2522723-2523070 348_na     115_aa rbfA Ribosome-binding factor A
2523 CP084444.1 GCA_026427535.1_02523 CDS open 2523280-2525436 2157_na     718_aa infB Translation initiation factor IF-2
2524 CP084444.1 GCA_026427535.1_02524 CDS open 2525441-2525758 318_na     105_aa rplGA putative ribosomal protein YlxQ
2525 CP084444.1 GCA_026427535.1_02525 CDS open 2525755-2526048 294_na     97_aa hypothetical protein
2526 CP084444.1 GCA_026427535.1_02526 CDS open 2526057-2527220 1164_na     387_aa nusA Transcription terminationantitermination protein NusA
2527 CP084444.1 GCA_026427535.1_02527 CDS open 2527241-2527708 468_na     155_aa rimP Ribosome maturation factor RimP
2528 CP084444.1 GCA_026427535.1_02528 CDS open 2527845-2532161 4317_na     1438_aa polC DNA polymerase III PolC-type
2529 CP084444.1 GCA_026427535.1_02529 CDS open 2532383-2534083 1701_na     566_aa proS Proline--tRNA ligase
2530 CP084444.1 GCA_026427535.1_02530 CDS open 2534102-2535388 1287_na     428_aa Putative zinc metalloprotease
2531 CP084444.1 GCA_026427535.1_02531 CDS open 2535897-2538488 2592_na     863_aa hypothetical protein
2532 CP084444.1 GCA_026427535.1_02532 CDS open 2538699-2539481 783_na     260_aa hypothetical protein
2533 CP084444.1 GCA_026427535.1_02533 CDS open 2539495-2540256 762_na     253_aa uppS Isoprenyl transferase
2534 CP084444.1 GCA_026427535.1_02534 CDS open 2540518-2541072 555_na     184_aa frr Ribosome-recycling factor
2535 CP084444.1 GCA_026427535.1_02535 CDS open 2541157-2541879 723_na     240_aa pyrH Uridylate kinase
2536 CP084444.1 GCA_026427535.1_02536 CDS open 2542016-2542894 879_na     292_aa tsf Elongation factor Ts
2537 CP084444.1 GCA_026427535.1_02537 CDS open 2543078-2543866 789_na     262_aa rpsB 30S ribosomal protein S2
2538 CP084444.1 GCA_026427535.1_02538 CDS open 2544085-2544858 774_na     257_aa codY GTP-sensing transcriptional pleiotropic repressor CodY
2539 CP084444.1 GCA_026427535.1_02539 CDS open 2544880-2546283 1404_na     467_aa hslU ATP-dependent protease ATPase subunit HslU
2540 CP084444.1 GCA_026427535.1_02540 CDS open 2546330-2546872 543_na     180_aa hslV ATP-dependent protease subunit HslV
2541 CP084444.1 GCA_026427535.1_02541 CDS open 2546873-2547766 894_na     297_aa xerC_5 Tyrosine recombinase XerC
2542 CP084444.1 GCA_026427535.1_02542 CDS open 2547898-2549205 1308_na     435_aa trmFO Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
2543 CP084444.1 GCA_026427535.1_02543 CDS open 2549257-2551326 2070_na     689_aa topA DNA topoisomerase 1
2544 CP084444.1 GCA_026427535.1_02544 CDS open 2551498-2552412 915_na     304_aa hypothetical protein
2545 CP084444.1 misc_RNA open 2552655-2552883 S35
2546 CP084444.1 GCA_026427535.1_02546 CDS open 2553029-2554264 1236_na     411_aa femA_3 Aminoacyltransferase FemA
2547 CP084444.1 GCA_026427535.1_02547 CDS open 2554427-2555335 909_na     302_aa sucD Succinate--CoA ligase [ADP-forming] subunit alpha
2548 CP084444.1 GCA_026427535.1_02548 CDS open 2555357-2556523 1167_na     388_aa sucC Succinate--CoA ligase [ADP-forming] subunit beta
2549 CP084444.1 GCA_026427535.1_02549 CDS open 2556634-2557401 768_na     255_aa rnhB Ribonuclease HII
2550 CP084444.1 GCA_026427535.1_02550 CDS open 2557385-2558269 885_na     294_aa rbgA Ribosome biogenesis GTPase A
2551 CP084444.1 GCA_026427535.1_02551 CDS open 2558526-2561117 2592_na     863_aa hypothetical protein
2552 CP084444.1 GCA_026427535.1_02552 CDS open 2561122-2563728 2607_na     868_aa hypothetical protein
2553 CP084444.1 GCA_026427535.1_02553 CDS open 2563975-2564325 351_na     116_aa rplS 50S ribosomal protein L19
2554 CP084444.1 misc_RNA open 2564345-2564387 L19_leader
2555 CP084444.1 GCA_026427535.1_02555 CDS open 2564431-2565168 738_na     245_aa trmD tRNA (guanine-N(1)-)-methyltransferase
2556 CP084444.1 GCA_026427535.1_02556 CDS open 2565168-2565668 501_na     166_aa rimM Ribosome maturation factor RimM
2557 CP084444.1 GCA_026427535.1_02557 CDS open 2565798-2566073 276_na     91_aa rpsP 30S ribosomal protein S16
2558 CP084444.1 GCA_026427535.1_02558 CDS open 2566288-2566548 261_na     86_aa hypothetical protein
2559 CP084444.1 GCA_026427535.1_02559 CDS open 2566538-2566912 375_na     124_aa hypothetical protein
2560 CP084444.1 GCA_026427535.1_02560 CDS open 2566881-2568026 1146_na     381_aa yhfS Putative acetyl-CoA C-acetyltransferase YhfS
2561 CP084444.1 GCA_026427535.1_02561 CDS open 2568023-2569405 1383_na     460_aa yhfT putative acyl--CoA ligase YhfT
2562 CP084444.1 GCA_026427535.1_02562 CDS open 2569801-2570217 417_na     138_aa IS200IS605 family transposase ISSep3
2563 CP084444.1 GCA_026427535.1_02563 CDS open 2570443-2571810 1368_na     455_aa ffh Signal recognition particle protein
2564 CP084444.1 GCA_026427535.1_02564 CDS open 2571828-2572160 333_na     110_aa hypothetical protein
2565 CP084444.1 GCA_026427535.1_02565 CDS open 2572153-2573376 1224_na     407_aa ftsY Signal recognition particle receptor FtsY
2566 CP084444.1 GCA_026427535.1_02566 CDS open 2573373-2576942 3570_na     1189_aa smc Chromosome partition protein Smc
2567 CP084444.1 GCA_026427535.1_02567 CDS open 2577028-2577759 732_na     243_aa rnc Ribonuclease 3
2568 CP084444.1 GCA_026427535.1_02568 CDS open 2577878-2578111 234_na     77_aa acpP Acyl carrier protein
2569 CP084444.1 GCA_026427535.1_02569 CDS open 2578294-2579028 735_na     244_aa fabG_5 3-oxoacyl-[acyl-carrier-protein] reductase FabG
2570 CP084444.1 GCA_026427535.1_02570 CDS open 2579021-2579947 927_na     308_aa fabD Malonyl CoA-acyl carrier protein transacylase
2571 CP084444.1 GCA_026427535.1_02571 CDS open 2579940-2580926 987_na     328_aa plsX Phosphate acyltransferase
2572 CP084444.1 GCA_026427535.1_02572 CDS open 2580919-2581488 570_na     189_aa fapR Transcription factor FapR
2573 CP084444.1 GCA_026427535.1_02573 CDS open 2581604-2583649 2046_na     681_aa recG ATP-dependent DNA helicase RecG
2574 CP084444.1 GCA_026427535.1_02574 CDS open 2583926-2585581 1656_na     551_aa putative protein
2575 CP084444.1 GCA_026427535.1_02575 CDS open 2585595-2585969 375_na     124_aa putative protein
2576 CP084444.1 GCA_026427535.1_02576 CDS open 2586358-2586546 189_na     62_aa rpmB 50S ribosomal protein L28
2577 CP084444.1 GCA_026427535.1_02577 CDS open 2586672-2587313 642_na     213_aa thiN Thiamine pyrophosphokinase
2578 CP084444.1 GCA_026427535.1_02578 CDS open 2587320-2587964 645_na     214_aa rpe Ribulose-phosphate 3-epimerase
2579 CP084444.1 GCA_026427535.1_02579 CDS open 2587964-2588839 876_na     291_aa rsgA Small ribosomal subunit biogenesis GTPase RsgA
2580 CP084444.1 GCA_026427535.1_02580 CDS open 2589023-2591026 2004_na     667_aa prkC Serinethreonine-protein kinase PrkC
2581 CP084444.1 GCA_026427535.1_02581 CDS open 2591023-2591766 744_na     247_aa stp Serinethreonine phosphatase stp
2582 CP084444.1 GCA_026427535.1_02582 CDS open 2591773-2592867 1095_na     364_aa rlmN putative dual-specificity RNA methyltransferase RlmN
2583 CP084444.1 GCA_026427535.1_02583 CDS open 2592870-2594177 1308_na     435_aa rsmB Ribosomal RNA small subunit methyltransferase B
2584 CP084444.1 GCA_026427535.1_02584 CDS open 2594174-2595106 933_na     310_aa fmt Methionyl-tRNA formyltransferase
2585 CP084444.1 GCA_026427535.1_02585 CDS open 2595099-2595587 489_na     162_aa def1 Peptide deformylase 1
2586 CP084444.1 GCA_026427535.1_02586 CDS open 2595939-2598347 2409_na     802_aa priA primosomal protein N
2587 CP084444.1 GCA_026427535.1_02587 CDS open 2598347-2598898 552_na     183_aa coaBC Coenzyme A biosynthesis bifunctional protein CoaBC
2588 CP084445.1 GCA_026427535.1_02588 CDS open 1-960 960_na     319_aa hypothetical protein
2589 CP084445.1 GCA_026427535.1_02589 CDS open 987-1514 528_na     175_aa hypothetical protein
2590 CP084445.1 GCA_026427535.1_02590 CDS open 1613-1726 114_na     37_aa hypothetical protein
2591 CP084445.1 GCA_026427535.1_02591 CDS open 2155-2715 561_na     186_aa fas6 Cytokinin riboside 5-monophosphate phosphoribohydrolase
2592 CP084445.1 GCA_026427535.1_02592 CDS open 3112-3234 123_na     40_aa hypothetical protein
2593 CP084445.1 GCA_026427535.1_02593 CDS open 5394-6503 1110_na     369_aa hypothetical protein
2594 CP084445.1 GCA_026427535.1_02594 CDS open 6637-7245 609_na     202_aa bin3 Putative transposon Tn552 DNA-invertase bin3
2595 CP084445.1 GCA_026427535.1_02595 CDS open 7352-7441 90_na     29_aa hypothetical protein
2596 CP084445.1 GCA_026427535.1_02596 CDS open 7442-8002 561_na     186_aa qacR HTH-type transcriptional regulator QacR
2597 CP084445.1 GCA_026427535.1_02597 CDS open 8186-9730 1545_na     514_aa qacA Antiseptic resistance protein
2598 CP084445.1 GCA_026427535.1_02598 CDS open 9935-10495 561_na     186_aa hypothetical protein
2599 CP084445.1 GCA_026427535.1_02599 CDS open 10822-11022 201_na     66_aa hypothetical protein
2600 CP084445.1 GCA_026427535.1_02600 CDS open 11028-11822 795_na     264_aa soj Sporulation initiation inhibitor protein Soj
2601 CP084445.1 GCA_026427535.1_02601 CDS open 12474-13409 936_na     311_aa hypothetical protein
2602 CP084445.1 GCA_026427535.1_02602 CDS open 13400-13969 570_na     189_aa repB Replication protein RepB
2603 CP084445.1 GCA_026427535.1_02603 CDS open 14093-14695 603_na     200_aa hypothetical protein
2604 CP084445.1 GCA_026427535.1_02604 CDS open 14695-15771 1077_na     358_aa hypothetical protein
2605 CP084445.1 GCA_026427535.1_02605 CDS open 15771-16091 321_na     106_aa hypothetical protein
2606 CP084445.1 GCA_026427535.1_02606 CDS open 16240-17439 1200_na     399_aa hypothetical protein
2607 CP084445.1 GCA_026427535.1_02607 CDS open 17481-18296 816_na     271_aa hypothetical protein
2608 CP084445.1 GCA_026427535.1_02608 CDS open 18846-19397 552_na     183_aa toxN Endoribonuclease ToxN
2609 CP084445.1 GCA_026427535.1_02609 CDS open 19665-20192 528_na     175_aa IS4 family transposase ISBce8
2610 CP084445.1 GCA_026427535.1_02610 CDS open 20385-21041 657_na     218_aa hypothetical protein
2611 CP084445.1 GCA_026427535.1_02611 CDS open 21105-21314 210_na     69_aa copZ_2 Copper chaperone CopZ
2612 CP084445.1 GCA_026427535.1_02612 CDS open 21348-23735 2388_na     795_aa copA_2 Copper-exporting P-type ATPase
2613 CP084445.1 GCA_026427535.1_02613 CDS open 23750-24025 276_na     91_aa csoR_2 Copper-sensing transcriptional repressor CsoR
2614 CP084445.1 GCA_026427535.1_02614 CDS open 24200-24475 276_na     91_aa hypothetical protein
2615 CP084445.1 GCA_026427535.1_02615 CDS open 24516-25457 942_na     313_aa czcD_3 Cadmium%2C cobalt and zincH(+)-K(+) antiporter
2616 CP084445.1 GCA_026427535.1_02616 CDS open 25820-26308 489_na     162_aa hypothetical protein
2617 CP084445.1 GCA_026427535.1_02617 CDS open 26324-26626 303_na     100_aa hypothetical protein
2618 CP084445.1 GCA_026427535.1_02618 CDS open 26650-27324 675_na     224_aa IS6 family transposase IS431R
2619 CP084445.1 GCA_026427535.1_02619 CDS open 27497-28204 708_na     235_aa hypothetical protein
2620 CP084445.1 GCA_026427535.1_02620 CDS open 28391-29134 744_na     247_aa knt Kanamycin nucleotidyltransferase
2621 CP084445.1 GCA_026427535.1_02621 CDS open 29351-29755 405_na     134_aa ble Bleomycin resistance protein
2622 CP084445.1 GCA_026427535.1_02622 CDS open 30262-31524 1263_na     420_aa hypothetical protein
2623 CP084445.1 GCA_026427535.1_02623 CDS open 31995-32669 675_na     224_aa IS6 family transposase IS431R
2624 CP084446.1 GCA_026427535.1_02624 CDS open 39-176 138_na     45_aa hypothetical protein
2625 CP084446.1 GCA_026427535.1_02625 CDS open 975-1709 735_na     244_aa ermC rRNA adenine N-6-methyltransferase