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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Treponema pallidum (GCA_029866725.1)

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PROKKA Annotations for GCA_029866725.1
Genome Selected: Treponema pallidum
ContigsBases CDSrRNA tmRNAtRNA
1 1,140,433 976 6 1 45
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Annotation Table [page:3]    |    Number of Records Found: 1030 [3 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
1001 CP094486.1 GCA_029866725.1_01001 CDS open 1105838-1106728 891_na     296_aa sigA RNA polymerase sigma factor SigA
1002 CP094486.1 GCA_029866725.1_01002 CDS open 1106978-1107244 267_na     88_aa groS 10 kDa chaperonin
1003 CP094486.1 GCA_029866725.1_01003 CDS open 1107255-1109117 1863_na     620_aa hypothetical protein
1004 CP094486.1 GCA_029866725.1_01004 CDS open 1109155-1109580 426_na     141_aa nusB Transcription antitermination protein NusB
1005 CP094486.1 GCA_029866725.1_01005 CDS open 1109577-1110662 1086_na     361_aa surA Chaperone SurA
1006 CP094486.1 GCA_029866725.1_01006 CDS open 1110735-1112666 1932_na     643_aa hypothetical protein
1007 CP094486.1 GCA_029866725.1_01007 CDS open 1112724-1114238 1515_na     504_aa rny Ribonuclease Y
1008 CP094486.1 GCA_029866725.1_01008 CDS open 1114260-1114703 444_na     147_aa hypothetical protein
1009 CP094486.1 GCA_029866725.1_01009 CDS open 1114704-1116224 1521_na     506_aa gatA Glutamyl-tRNA(Gln) amidotransferase subunit A
1010 CP094486.1 GCA_029866725.1_01010 CDS open 1116217-1117746 1530_na     509_aa gatB Aspartylglutamyl-tRNA(AsnGln) amidotransferase subunit B
1011 CP094486.1 GCA_029866725.1_01011 CDS open 1117842-1119209 1368_na     455_aa radA DNA repair protein RadA
1012 CP094486.1 GCA_029866725.1_01012 CDS open 1119256-1119924 669_na     222_aa recX Regulatory protein RecX
1013 CP094486.1 GCA_029866725.1_01013 CDS open 1119878-1120267 390_na     129_aa rpsI 30S ribosomal protein S9
1014 CP094486.1 GCA_029866725.1_01014 CDS open 1120283-1120711 429_na     142_aa rplM 50S ribosomal protein L13
1015 CP094486.1 GCA_029866725.1_01015 CDS open 1120708-1120950 243_na     80_aa hypothetical protein
1016 CP094486.1 GCA_029866725.1_01016 CDS open 1121144-1122913 1770_na     589_aa hypothetical protein
1017 CP094486.1 GCA_029866725.1_01017 CDS open 1123036-1123812 777_na     258_aa udp Uridine phosphorylase
1018 CP094486.1 GCA_029866725.1_01018 CDS open 1123828-1125885 2058_na     685_aa pcrA_2 ATP-dependent DNA helicase PcrA
1019 CP094486.1 GCA_029866725.1_01019 CDS open 1125923-1126609 687_na     228_aa deaD_2 ATP-dependent RNA helicase DeaD
1020 CP094486.1 GCA_029866725.1_01020 CDS open 1126650-1128320 1671_na     556_aa hypothetical protein
1021 CP094486.1 GCA_029866725.1_01021 CDS open 1128388-1128822 435_na     144_aa hypothetical protein
1022 CP094486.1 GCA_029866725.1_01022 CDS open 1128834-1129769 936_na     311_aa hypothetical protein
1023 CP094486.1 GCA_029866725.1_01023 CDS open 1129843-1130868 1026_na     341_aa yrbG Inner membrane protein YrbG
1024 CP094486.1 GCA_029866725.1_01024 CDS open 1130865-1133819 2955_na     984_aa valS Valine--tRNA ligase
1025 CP094486.1 GCA_029866725.1_01025 CDS open 1133888-1136266 2379_na     792_aa actP Copper-transporting P-type ATPase
1026 CP094486.1 GCA_029866725.1_01026 CDS open 1136356-1137072 717_na     238_aa hypothetical protein
1027 CP094486.1 GCA_029866725.1_01027 CDS open 1137231-1137764 534_na     177_aa tpf1 Antigen TpF1
1028 CP094486.1 GCA_029866725.1_01028 CDS open 1138021-1138563 543_na     180_aa apt Adenine phosphoribosyltransferase
1029 CP094486.1 GCA_029866725.1_01029 CDS open 1138586-1139641 1056_na     351_aa epmA Elongation factor P--(R)-beta-lysine ligase
1030 CP094486.1 GCA_029866725.1_01030 CDS open 1139641-1140240 600_na     199_aa clpP_2 ATP-dependent Clp protease proteolytic subunit