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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus caprae (GCA_029928745.1)

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PROKKA Annotations for GCA_029928745.1
Genome Selected: Staphylococcus caprae
ContigsBases CDSrRNA tmRNAtRNA
22 2603025 2462 7 1 57
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Annotation Table [page:6]    |    Number of Records Found: 2594 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 JAREFI010000009.1 GCA_029928745.1_02501 CDS open 8412-8768 357_na     118_aa acpS Holo-[acyl-carrier-protein] synthase
2502 JAREFI010000009.1 GCA_029928745.1_02502 CDS open 8783-9325 543_na     180_aa hypothetical protein
2503 JAREFI010000009.1 GCA_029928745.1_02503 CDS open 9312-10817 1506_na     501_aa hypothetical protein
2504 JAREFI010000009.1 GCA_029928745.1_02504 CDS open 10804-11283 480_na     159_aa hypothetical protein
2505 JAREFI010000009.1 GCA_029928745.1_02505 CDS open 11405-12934 1530_na     509_aa cshA DEAD-box ATP-dependent RNA helicase CshA
2506 JAREFI010000009.1 GCA_029928745.1_02506 CDS open 13247-14602 1356_na     451_aa murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
2507 JAREFI010000009.1 GCA_029928745.1_02507 CDS open 14618-15688 1071_na     356_aa ddl D-alanine--D-alanine ligase
2508 JAREFI010000009.1 GCA_029928745.1_02508 CDS open 16335-17546 1212_na     403_aa rodA Peptidoglycan glycosyltransferase RodA
2509 JAREFI010000009.1 GCA_029928745.1_02509 CDS open 17603-17740 138_na     45_aa hypothetical protein
2510 JAREFI010000009.1 GCA_029928745.1_02510 CDS open 17876-18082 207_na     68_aa hypothetical protein
2511 JAREFI010000009.1 GCA_029928745.1_02511 CDS open 18096-18389 294_na     97_aa hypothetical protein
2512 JAREFI010000009.1 GCA_029928745.1_02512 CDS open 18561-20045 1485_na     494_aa cls_2 Cardiolipin synthase
2513 JAREFI010000009.1 GCA_029928745.1_02513 CDS open 20105-20755 651_na     216_aa yedJ putative protein YedJ
2514 JAREFI010000009.1 GCA_029928745.1_02514 CDS open 20822-21691 870_na     289_aa yidC_2 Membrane protein insertase YidC
2515 JAREFI010000009.1 GCA_029928745.1_02515 CDS open 21780-22418 639_na     212_aa thiE_2 Thiamine-phosphate synthase
2516 JAREFI010000009.1 GCA_029928745.1_02516 CDS open 22419-23213 795_na     264_aa thiM Hydroxyethylthiazole kinase
2517 JAREFI010000009.1 GCA_029928745.1_02517 CDS open 23206-24027 822_na     273_aa thiD Hydroxymethylpyrimidinephosphomethylpyrimidine kinase
2518 JAREFI010000009.1 GCA_029928745.1_02518 CDS open 24020-24709 690_na     229_aa tenA Aminopyrimidine aminohydrolase
2519 JAREFI010000009.1 misc_RNA open 24786-24884 TPP
2520 JAREFI010000009.1 GCA_029928745.1_02520 CDS open 25008-25730 723_na     240_aa sceD putative transglycosylase SceD
2521 JAREFI010000009.1 GCA_029928745.1_02521 CDS open 26122-26517 396_na     131_aa ssbB Single-stranded DNA-binding protein B
2522 JAREFI010000009.1 GCA_029928745.1_02522 CDS open 26710-27153 444_na     147_aa hypothetical protein
2523 JAREFI010000009.1 GCA_029928745.1_02523 CDS open 27210-27647 438_na     145_aa fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
2524 JAREFI010000009.1 GCA_029928745.1_02524 CDS open 27689-28954 1266_na     421_aa murA1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
2525 JAREFI010000009.1 GCA_029928745.1_02525 CDS open 29064-29297 234_na     77_aa hypothetical protein
2526 JAREFI010000009.1 GCA_029928745.1_02526 CDS open 29447-29851 405_na     134_aa atpC ATP synthase epsilon chain
2527 JAREFI010000009.1 GCA_029928745.1_02527 CDS open 29871-31283 1413_na     470_aa atpD ATP synthase subunit beta
2528 JAREFI010000009.1 GCA_029928745.1_02528 CDS open 31305-32171 867_na     288_aa atpG ATP synthase gamma chain
2529 JAREFI010000009.1 GCA_029928745.1_02529 CDS open 32283-33794 1512_na     503_aa atpA ATP synthase subunit alpha
2530 JAREFI010000009.1 GCA_029928745.1_02530 CDS open 33817-34356 540_na     179_aa atpH ATP synthase subunit delta
2531 JAREFI010000009.1 GCA_029928745.1_02531 CDS open 34356-34871 516_na     171_aa atpF ATP synthase subunit b
2532 JAREFI010000009.1 GCA_029928745.1_02532 CDS open 34968-35180 213_na     70_aa atpE ATP synthase subunit c
2533 JAREFI010000009.1 GCA_029928745.1_02533 CDS open 35225-35953 729_na     242_aa atpB ATP synthase subunit a
2534 JAREFI010000009.1 GCA_029928745.1_02534 CDS open 35980-36330 351_na     116_aa hypothetical protein
2535 JAREFI010000009.1 GCA_029928745.1_02535 CDS open 36498-37631 1134_na     377_aa mnaA UDP-N-acetylglucosamine 2-epimerase
2536 JAREFI010000009.1 GCA_029928745.1_02536 CDS open 37653-38282 630_na     209_aa upp Uracil phosphoribosyltransferase
2537 JAREFI010000009.1 GCA_029928745.1_02537 CDS open 38311-39549 1239_na     412_aa glyA Serine hydroxymethyltransferase
2538 JAREFI010000009.1 GCA_029928745.1_02538 CDS open 39574-40098 525_na     174_aa hypothetical protein
2539 JAREFI010000009.1 GCA_029928745.1_02539 CDS open 40202-40621 420_na     139_aa ptpB Low molecular weight protein-tyrosine-phosphatase PtpB
2540 JAREFI010000009.1 GCA_029928745.1_02540 CDS open 40618-41661 1044_na     347_aa ywlC Threonylcarbamoyl-AMP synthase
2541 JAREFI010000009.1 GCA_029928745.1_02541 CDS open 41854-42690 837_na     278_aa prmC_3 Release factor glutamine methyltransferase
2542 JAREFI010000009.1 GCA_029928745.1_02542 CDS open 42677-43753 1077_na     358_aa prfA Peptide chain release factor 1
2543 JAREFI010000009.1 GCA_029928745.1_02543 CDS open 43753-44352 600_na     199_aa tdk Thymidine kinase
2544 JAREFI010000009.1 GCA_029928745.1_02544 CDS open 44582-44839 258_na     85_aa rpmE2 50S ribosomal protein L31 type B
2545 JAREFI010000009.1 GCA_029928745.1_02545 CDS open 44957-46273 1317_na     438_aa rho Transcription termination factor Rho
2546 JAREFI010000009.1 GCA_029928745.1_02546 CDS open 46582-48009 1428_na     475_aa Putative aldehyde dehydrogenase
2547 JAREFI010000009.1 GCA_029928745.1_02547 CDS open 48214-48546 333_na     110_aa yodB HTH-type transcriptional regulator YodB
2548 JAREFI010000009.1 GCA_029928745.1_02548 CDS open 48636-49895 1260_na     419_aa murA2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2
2549 JAREFI010000009.1 GCA_029928745.1_02549 CDS open 50271-51131 861_na     286_aa fba Fructose-bisphosphate aldolase
2550 JAREFI010000009.1 GCA_029928745.1_02550 CDS open 51352-51873 522_na     173_aa hypothetical protein
2551 JAREFI010000009.1 GCA_029928745.1_02551 CDS open 52056-52475 420_na     139_aa hypothetical protein
2552 JAREFI010000009.1 GCA_029928745.1_02552 CDS open 52631-54238 1608_na     535_aa pyrG CTP synthase
2553 JAREFI010000009.1 misc_RNA open 54397-54467 tsr31
2554 JAREFI010000009.1 GCA_029928745.1_02554 CDS open 54695-55231 537_na     178_aa rpoE putative DNA-directed RNA polymerase subunit delta
2555 JAREFI010000009.1 GCA_029928745.1_02555 CDS open 55342-56202 861_na     286_aa hypothetical protein
2556 JAREFI010000009.1 GCA_029928745.1_02556 CDS open 56464-57261 798_na     265_aa coaW Type II pantothenate kinase
2557 JAREFI010000009.1 GCA_029928745.1_02557 CDS open 57352-58017 666_na     221_aa hypothetical protein
2558 JAREFI010000009.1 GCA_029928745.1_02558 CDS open 58190-59383 1194_na     397_aa hypothetical protein
2559 JAREFI010000009.1 GCA_029928745.1_02559 CDS open 59380-60564 1185_na     394_aa N-acetyldiaminopimelate deacetylase
2560 JAREFI010000009.1 GCA_029928745.1_02560 CDS open 60915-61385 471_na     156_aa luxS S-ribosylhomocysteine lyase
2561 JAREFI010000009.1 GCA_029928745.1_02561 CDS open 61606-61956 351_na     116_aa hypothetical protein
2562 JAREFI010000009.1 GCA_029928745.1_02562 CDS open 61953-63143 1191_na     396_aa deoB Phosphopentomutase
2563 JAREFI010000009.1 GCA_029928745.1_02563 CDS open 63156-64457 1302_na     433_aa pdp Pyrimidine-nucleoside phosphorylase
2564 JAREFI010000009.1 GCA_029928745.1_02564 CDS open 64484-65146 663_na     220_aa deoC2 Deoxyribose-phosphate aldolase 2
2565 JAREFI010000009.1 GCA_029928745.1_02565 CDS open 65360-66070 711_na     236_aa deoD Purine nucleoside phosphorylase DeoD-type
2566 JAREFI010000009.1 GCA_029928745.1_02566 CDS open 66172-66618 447_na     148_aa dps General stress protein 20U
2567 JAREFI010000009.1 GCA_029928745.1_02567 CDS open 66866-67276 411_na     136_aa hypothetical protein
2568 JAREFI010000009.1 misc_RNA open 67526-67746 S35
2569 JAREFI010000009.1 GCA_029928745.1_02569 CDS open 67733-69106 1374_na     457_aa hypothetical protein
2570 JAREFI010000009.1 GCA_029928745.1_02570 CDS open 69301-69531 231_na     76_aa hypothetical protein
2571 JAREFI010000009.1 GCA_029928745.1_02571 CDS open 69588-70526 939_na     312_aa yvyI Putative mannose-6-phosphate isomerase YvyI
2572 JAREFI010000009.1 GCA_029928745.1_02572 CDS open 71001-71654 654_na     217_aa yhfK_2 putative sugar epimerase YhfK
2573 JAREFI010000009.1 GCA_029928745.1_02573 CDS open 71796-72125 330_na     109_aa czrA HTH-type transcriptional repressor CzrA
2574 JAREFI010000009.1 GCA_029928745.1_02574 CDS open 72126-73106 981_na     326_aa czcD Cadmium%2C cobalt and zincH(+)-K(+) antiporter
2575 JAREFI010000009.1 GCA_029928745.1_02575 CDS open 73214-73945 732_na     243_aa hypothetical protein
2576 JAREFI010000009.1 GCA_029928745.1_02576 CDS open 74078-75277 1200_na     399_aa hypothetical protein
2577 JAREFI010000009.1 GCA_029928745.1_02577 CDS open 75365-76222 858_na     285_aa yidA Sugar phosphatase YidA
2578 JAREFI010000009.1 GCA_029928745.1_02578 CDS open 76473-78278 1806_na     601_aa glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
2579 JAREFI010000009.1 misc_RNA open 78447-78662 glmS
2580 JAREFI010000009.1 GCA_029928745.1_02580 CDS open 78946-80508 1563_na     520_aa mtlA PTS system mannitol-specific EIICB component
2581 JAREFI010000009.1 GCA_029928745.1_02581 CDS open 80539-82566 2028_na     675_aa mtlR Transcriptional regulator MtlR
2582 JAREFI010000009.1 GCA_029928745.1_02582 CDS open 82579-83013 435_na     144_aa mtlF Mannitol-specific phosphotransferase enzyme IIA component
2583 JAREFI010000009.1 GCA_029928745.1_02583 CDS open 83013-84116 1104_na     367_aa mtlD Mannitol-1-phosphate 5-dehydrogenase
2584 JAREFI010000009.1 GCA_029928745.1_02584 CDS open 84242-85597 1356_na     451_aa glmM Phosphoglucosamine mutase
2585 JAREFI010000009.1 GCA_029928745.1_02585 CDS open 85626-86558 933_na     310_aa cdaR CdaA regulatory protein CdaR
2586 JAREFI010000009.1 GCA_029928745.1_02586 CDS open 86560-87366 807_na     268_aa cdaA Cyclic di-AMP synthase CdaA
2587 JAREFI010000009.1 GCA_029928745.1_02587 CDS open 87498-88406 909_na     302_aa arg Arginase
2588 JAREFI010000009.1 tRNA open 88536-88609 tRNA-Lys(ttt)
2589 JAREFI010000009.1 tRNA open 88613-88687 tRNA-Gln(ttg)
2590 JAREFI010000009.1 tRNA open 88695-88778 tRNA-Tyr(gta)
2591 JAREFI010000009.1 tRNA open 88799-88874 tRNA-Val(tac)
2592 JAREFI010000009.1 tRNA open 88879-88953 tRNA-Glu(ttc)
2593 JAREFI010000009.1 tRNA open 88955-89029 tRNA-Asn(gtt)
2594 JAREFI010000009.1 rRNA open 89044-89153 5S ribosomal RNA