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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Fusobacterium necrophorum (GCA_030180825.1)

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PROKKA Annotations for GCA_030180825.1
Genome Selected: Fusobacterium necrophorum
ContigsBases CDSrRNA tmRNAtRNA
73 2174870 2035 7 1 48
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Annotation Table [page:5]    |    Number of Records Found: 2109 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 JAMGTO010000009.1 GCA_030180825.1_02001 CDS open 14291-15085 795_na     264_aa lptB_2 Lipopolysaccharide export system ATP-binding protein LptB
2002 JAMGTO010000009.1 GCA_030180825.1_02002 CDS open 15104-15820 717_na     238_aa livF High-affinity branched-chain amino acid transport ATP-binding protein LivF
2003 JAMGTO010000009.1 GCA_030180825.1_02003 CDS open 15899-17245 1347_na     448_aa hypothetical protein
2004 JAMGTO010000009.1 GCA_030180825.1_02004 CDS open 17261-18457 1197_na     398_aa patB_2 Cystathionine beta-lyase PatB
2005 JAMGTO010000009.1 GCA_030180825.1_02005 CDS open 18640-19791 1152_na     383_aa acdA_2 Acyl-CoA dehydrogenase
2006 JAMGTO010000009.1 GCA_030180825.1_02006 CDS open 19816-20940 1125_na     374_aa hadC_2 (R)-2-hydroxyisocaproyl-CoA dehydratase beta subunit
2007 JAMGTO010000009.1 GCA_030180825.1_02007 CDS open 20954-22222 1269_na     422_aa hadB_3 (R)-2-hydroxyisocaproyl-CoA dehydratase alpha subunit
2008 JAMGTO010000009.1 GCA_030180825.1_02008 CDS open 22224-23015 792_na     263_aa hadI 2-hydroxyisocaproyl-CoA dehydratase activator
2009 JAMGTO010000009.1 GCA_030180825.1_02009 CDS open 23075-23515 441_na     146_aa epi Ethylmalonyl-CoAmethylmalonyl-CoA epimerase
2010 JAMGTO010000009.1 GCA_030180825.1_02010 CDS open 23933-25417 1485_na     494_aa hypothetical protein
2011 JAMGTO010000009.1 GCA_030180825.1_02011 CDS open 25479-27038 1560_na     519_aa ydiF_2 Acetate CoA-transferase YdiF
2012 JAMGTO010000009.1 GCA_030180825.1_02012 CDS open 27308-28795 1488_na     495_aa hypothetical protein
2013 JAMGTO010000009.1 GCA_030180825.1_02013 CDS open 28836-30047 1212_na     403_aa ribBA Riboflavin biosynthesis protein RibBA
2014 JAMGTO010000009.1 GCA_030180825.1_02014 CDS open 30058-30705 648_na     215_aa ribE Riboflavin synthase
2015 JAMGTO010000009.1 GCA_030180825.1_02015 CDS open 30715-31794 1080_na     359_aa ribD Riboflavin biosynthesis protein RibD
2016 JAMGTO010000009.1 GCA_030180825.1_02016 CDS open 31799-32260 462_na     153_aa ribH 6%2C7-dimethyl-8-ribityllumazine synthase
2017 JAMGTO010000009.1 misc_RNA open 32345-32460 FMN
2018 JAMGTO010000009.1 GCA_030180825.1_02018 CDS open 32727-33542 816_na     271_aa hypothetical protein
2019 JAMGTO010000009.1 GCA_030180825.1_02019 CDS open 33695-33808 114_na     37_aa hypothetical protein
2020 JAMGTO010000009.1 GCA_030180825.1_02020 CDS open 33810-34358 549_na     182_aa gpx1 Hydroperoxy fatty acid reductase gpx1
2021 JAMGTO010000009.1 GCA_030180825.1_02021 CDS open 34379-34822 444_na     147_aa ohrR Organic hydroperoxide resistance transcriptional regulator
2022 JAMGTO010000009.1 GCA_030180825.1_02022 CDS open 34864-35943 1080_na     359_aa glpQ_2 Glycerophosphodiester phosphodiesterase
2023 JAMGTO010000009.1 GCA_030180825.1_02023 CDS open 36037-36339 303_na     100_aa hypothetical protein
2024 JAMGTO010000009.1 GCA_030180825.1_02024 CDS open 36376-37410 1035_na     344_aa nrdB Ribonucleoside-diphosphate reductase subunit beta
2025 JAMGTO010000009.1 GCA_030180825.1_02025 CDS open 37403-39661 2259_na     752_aa nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha
2026 JAMGTO010000009.1 GCA_030180825.1_02026 CDS open 39658-39864 207_na     68_aa hypothetical protein
2027 JAMGTO010000009.1 GCA_030180825.1_02027 CDS open 39975-41240 1266_na     421_aa brnQ_1 Branched-chain amino acid transport system 2 carrier protein
2028 JAMGTO010000009.1 GCA_030180825.1_02028 CDS open 41258-41623 366_na     121_aa mgsR Regulatory protein MgsR
2029 JAMGTO010000009.1 GCA_030180825.1_02029 CDS open 41644-42789 1146_na     381_aa brnQ_2 Branched-chain amino acid transport system 2 carrier protein
2030 JAMGTO010000009.1 GCA_030180825.1_02030 CDS open 42866-44182 1317_na     438_aa der GTPase Der
2031 JAMGTO010000009.1 GCA_030180825.1_02031 CDS open 44191-45888 1698_na     565_aa hypothetical protein
2032 JAMGTO010000009.1 GCA_030180825.1_02032 CDS open 45885-46592 708_na     235_aa deoD_3 Purine nucleoside phosphorylase DeoD-type
2033 JAMGTO010000009.1 GCA_030180825.1_02033 CDS open 46730-47902 1173_na     390_aa hypothetical protein
2034 JAMGTO010000009.1 GCA_030180825.1_02034 CDS open 48397-49077 681_na     226_aa hypothetical protein
2035 JAMGTO010000009.1 GCA_030180825.1_02035 CDS open 49093-49596 504_na     167_aa isiB Flavodoxin
2036 JAMGTO010000009.1 GCA_030180825.1_02036 CDS open 49690-49929 240_na     79_aa hypothetical protein
2037 JAMGTO010000009.1 GCA_030180825.1_02037 CDS open 49933-51294 1362_na     453_aa hypothetical protein
2038 JAMGTO010000009.1 GCA_030180825.1_02038 CDS open 51325-52758 1434_na     477_aa hypothetical protein
2039 JAMGTO010000009.1 GCA_030180825.1_02039 CDS open 52775-53890 1116_na     371_aa adh1 Long-chain-alcohol dehydrogenase 1
2040 JAMGTO010000009.1 GCA_030180825.1_02040 CDS open 53899-55209 1311_na     436_aa putative butyrate:acetyl-CoA coenzyme A-transferase
2041 JAMGTO010000009.1 GCA_030180825.1_02041 CDS open 55214-55495 282_na     93_aa hypothetical protein
2042 JAMGTO010000009.1 GCA_030180825.1_02042 CDS open 55513-56961 1449_na     482_aa abfD 4-hydroxybutyryl-CoA dehydratasevinylacetyl-CoA-Delta-isomerase
2043 JAMGTO010000009.1 GCA_030180825.1_02043 CDS open 57158-58549 1392_na     463_aa norR_4 Anaerobic nitric oxide reductase transcription regulator NorR
2044 JAMGTO010000009.1 GCA_030180825.1_02044 CDS open 58610-59764 1155_na     384_aa rpoN1 RNA polymerase sigma-54 factor 1
2045 JAMGTO010000009.1 GCA_030180825.1_02045 CDS open 59859-60218 360_na     119_aa hypothetical protein
2046 JAMGTO010000009.1 GCA_030180825.1_02046 CDS open 60231-61010 780_na     259_aa nadE NH(3)-dependent NAD(+) synthetase
2047 JAMGTO010000009.1 GCA_030180825.1_02047 CDS open 61007-61903 897_na     298_aa rbgA Ribosome biogenesis GTPase A
2048 JAMGTO010000009.1 GCA_030180825.1_02048 CDS open 61878-62561 684_na     227_aa rsmI Ribosomal RNA small subunit methyltransferase I
2049 JAMGTO010000009.1 GCA_030180825.1_02049 CDS open 62562-63848 1287_na     428_aa hypothetical protein
2050 JAMGTO010000009.1 GCA_030180825.1_02050 CDS open 63845-64648 804_na     267_aa tlyA Hemolysin A
2051 JAMGTO010000009.1 GCA_030180825.1_02051 CDS open 64657-65487 831_na     276_aa hypothetical protein
2052 JAMGTO010000009.1 GCA_030180825.1_02052 CDS open 65471-67252 1782_na     593_aa dxs_2 1-deoxy-D-xylulose-5-phosphate synthase
2053 JAMGTO010000009.1 GCA_030180825.1_02053 CDS open 67276-67581 306_na     101_aa yhbY RNA-binding protein YhbY
2054 JAMGTO010000009.1 GCA_030180825.1_02054 CDS open 67602-69470 1869_na     622_aa rnjA Ribonuclease J1
2055 JAMGTO010000009.1 GCA_030180825.1_02055 CDS open 69463-71292 1830_na     609_aa mrdA Peptidoglycan D%2CD-transpeptidase MrdA
2056 JAMGTO010000009.1 GCA_030180825.1_02056 CDS open 71302-71700 399_na     132_aa hypothetical protein
2057 JAMGTO010000009.1 GCA_030180825.1_02057 CDS open 71718-72680 963_na     320_aa hypothetical protein
2058 JAMGTO010000009.1 GCA_030180825.1_02058 CDS open 72658-73968 1311_na     436_aa mtaB Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB
2059 JAMGTO010000009.1 GCA_030180825.1_02059 CDS open 73955-74668 714_na     237_aa rsmE Ribosomal RNA small subunit methyltransferase E
2060 JAMGTO010000009.1 GCA_030180825.1_02060 CDS open 74683-75099 417_na     138_aa iscR HTH-type transcriptional regulator IscR
2061 JAMGTO010000009.1 GCA_030180825.1_02061 CDS open 75089-76093 1005_na     334_aa ruvB Holliday junction ATP-dependent DNA helicase RuvB
2062 JAMGTO010000009.1 GCA_030180825.1_02062 CDS open 76118-76723 606_na     201_aa hypothetical protein
2063 JAMGTO010000009.1 GCA_030180825.1_02063 CDS open 76839-77039 201_na     66_aa hypothetical protein
2064 JAMGTO010000009.1 GCA_030180825.1_02064 CDS open 77208-78029 822_na     273_aa pdxK Pyridoxinepyridoxalpyridoxamine kinase
2065 JAMGTO010000009.1 tRNA open 78079-78163 tRNA-Ser(gga)
2066 JAMGTO010000009.1 GCA_030180825.1_02066 CDS open 78335-78691 357_na     118_aa hypothetical protein
2067 JAMGTO010000009.1 GCA_030180825.1_02067 CDS open 78758-78883 126_na     41_aa hypothetical protein
2068 JAMGTO010000009.1 GCA_030180825.1_02068 CDS open 79032-79208 177_na     58_aa hypothetical protein
2069 JAMGTO010000009.1 GCA_030180825.1_02069 CDS open 79205-79621 417_na     138_aa hypothetical protein
2070 JAMGTO010000009.1 GCA_030180825.1_02070 CDS open 79842-80492 651_na     216_aa hypothetical protein
2071 JAMGTO010000009.1 GCA_030180825.1_02071 CDS open 80642-81568 927_na     308_aa htpX Protease HtpX
2072 JAMGTO010000009.1 GCA_030180825.1_02072 CDS open 81662-81946 285_na     94_aa rpmA 50S ribosomal protein L27
2073 JAMGTO010000009.1 GCA_030180825.1_02073 CDS open 81947-82282 336_na     111_aa hypothetical protein
2074 JAMGTO010000009.1 GCA_030180825.1_02074 CDS open 82294-82605 312_na     103_aa rplU 50S ribosomal protein L21
2075 JAMGTO010000009.1 GCA_030180825.1_02075 CDS open 82730-84397 1668_na     555_aa bepA_2 Beta-barrel assembly-enhancing protease
2076 JAMGTO010000009.1 GCA_030180825.1_02076 CDS open 84440-84916 477_na     158_aa ispF 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase
2077 JAMGTO010000009.1 GCA_030180825.1_02077 CDS open 84932-85906 975_na     324_aa hldE_2 Bifunctional protein HldE
2078 JAMGTO010000009.1 GCA_030180825.1_02078 CDS open 86032-86550 519_na     172_aa cobO Corrinoid adenosyltransferase
2079 JAMGTO010000009.1 GCA_030180825.1_02079 CDS open 87052-87282 231_na     76_aa hypothetical protein
2080 JAMGTO010000009.1 GCA_030180825.1_02080 CDS open 87279-87518 240_na     79_aa hypothetical protein
2081 JAMGTO010000009.1 tmRNA open 87765-88111 ssrA transfer-messenger RNA%2C SsrA
2082 JAMGTO010000009.1 GCA_030180825.1_02082 CDS open 88247-89548 1302_na     433_aa dinF DNA damage-inducible protein F
2083 JAMGTO010000009.1 GCA_030180825.1_02083 CDS open 89580-90329 750_na     249_aa putative transcriptional regulatory protein
2084 JAMGTO010000009.1 GCA_030180825.1_02084 CDS open 90371-92413 2043_na     680_aa recG ATP-dependent DNA helicase RecG
2085 JAMGTO010000009.1 GCA_030180825.1_02085 CDS open 92469-94178 1710_na     569_aa proS Proline--tRNA ligase
2086 JAMGTO010000009.1 GCA_030180825.1_02086 CDS open 94249-95736 1488_na     495_aa ypwA Carboxypeptidase 1
2087 JAMGTO010000009.1 GCA_030180825.1_02087 CDS open 95754-97523 1770_na     589_aa hypothetical protein
2088 JAMGTO010000009.1 GCA_030180825.1_02088 CDS open 97557-98108 552_na     183_aa lemA Protein LemA
2089 JAMGTO010000009.1 GCA_030180825.1_02089 CDS open 98125-99309 1185_na     394_aa NAD-dependent malic enzyme
2090 JAMGTO010000009.1 GCA_030180825.1_02090 CDS open 99331-100110 780_na     259_aa yycJ Putative metallo-hydrolase YycJ
2091 JAMGTO010000009.1 GCA_030180825.1_02091 CDS open 100120-100695 576_na     191_aa hypothetical protein
2092 JAMGTO010000009.1 GCA_030180825.1_02092 CDS open 101169-101993 825_na     274_aa panB 3-methyl-2-oxobutanoate hydroxymethyltransferase
2093 JAMGTO010000009.1 GCA_030180825.1_02093 CDS open 101953-102861 909_na     302_aa hypothetical protein
2094 JAMGTO010000009.1 GCA_030180825.1_02094 CDS open 102849-103790 942_na     313_aa panS Pantothenate precursors transporter PanS
2095 JAMGTO010000009.1 GCA_030180825.1_02095 CDS open 103793-104635 843_na     280_aa panC Pantothenate synthetase
2096 JAMGTO010000009.1 GCA_030180825.1_02096 CDS open 104877-106271 1395_na     464_aa gabR HTH-type transcriptional regulatory protein GabR
2097 JAMGTO010000009.1 GCA_030180825.1_02097 CDS open 106372-107220 849_na     282_aa pdxS Pyridoxal 5-phosphate synthase subunit PdxS
2098 JAMGTO010000009.1 GCA_030180825.1_02098 CDS open 107407-108156 750_na     249_aa yusV putative siderophore transport system ATP-binding protein YusV
2099 JAMGTO010000009.1 GCA_030180825.1_02099 CDS open 108153-109232 1080_na     359_aa hmuU_4 Hemin transport system permease protein HmuU
2100 JAMGTO010000009.1 GCA_030180825.1_02100 CDS open 109180-110130 951_na     316_aa btuF_4 Vitamin B12-binding protein
2101 JAMGTO010000009.1 GCA_030180825.1_02101 CDS open 110150-110785 636_na     211_aa ntpD V-type sodium ATPase subunit D
2102 JAMGTO010000009.1 GCA_030180825.1_02102 CDS open 110796-112172 1377_na     458_aa ntpB V-type sodium ATPase subunit B
2103 JAMGTO010000009.1 GCA_030180825.1_02103 CDS open 112156-113934 1779_na     592_aa ntpA V-type sodium ATPase catalytic subunit A
2104 JAMGTO010000009.1 GCA_030180825.1_02104 CDS open 113952-114269 318_na     105_aa ntpG V-type sodium ATPase subunit G
2105 JAMGTO010000009.1 GCA_030180825.1_02105 CDS open 114253-115251 999_na     332_aa ntpC V-type sodium ATPase subunit C
2106 JAMGTO010000009.1 GCA_030180825.1_02106 CDS open 115261-115815 555_na     184_aa atpE_2 V-type proton ATPase subunit E
2107 JAMGTO010000009.1 GCA_030180825.1_02107 CDS open 115846-116331 486_na     161_aa ntpK V-type sodium ATPase subunit K
2108 JAMGTO010000009.1 GCA_030180825.1_02108 CDS open 116362-118278 1917_na     638_aa hypothetical protein
2109 JAMGTO010000009.1 GCA_030180825.1_02109 CDS open 118250-118639 390_na     129_aa hypothetical protein