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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Brochothrix thermosphacta (GCA_030503795.1)

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PROKKA Annotations for GCA_030503795.1
Genome Selected: Brochothrix thermosphacta
ContigsBases CDSrRNA tmRNAtRNA
1 2558019 2464 28 1 85
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Annotation Table [page:6]    |    Number of Records Found: 2633 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CP129978.1 GCA_030503795.1_02501 CDS open 2444952-2445767 816_na     271_aa hypothetical protein
2502 CP129978.1 GCA_030503795.1_02502 CDS open 2445785-2446153 369_na     122_aa yabA Initiation-control protein YabA
2503 CP129978.1 GCA_030503795.1_02503 CDS open 2446228-2446971 744_na     247_aa yfiC tRNA1(Val) (adenine(37)-N6)-methyltransferase
2504 CP129978.1 GCA_030503795.1_02504 CDS open 2446958-2447227 270_na     89_aa hypothetical protein
2505 CP129978.1 GCA_030503795.1_02505 CDS open 2447229-2448128 900_na     299_aa rsmI Ribosomal RNA small subunit methyltransferase I
2506 CP129978.1 GCA_030503795.1_02506 CDS open 2448282-2450276 1995_na     664_aa metG Methionine--tRNA ligase
2507 CP129978.1 GCA_030503795.1_02507 CDS open 2450418-2451194 777_na     258_aa ycfH putative metal-dependent hydrolase YcfH
2508 CP129978.1 GCA_030503795.1_02508 CDS open 2451547-2452524 978_na     325_aa hypothetical protein
2509 CP129978.1 GCA_030503795.1_02509 CDS open 2452631-2453194 564_na     187_aa rnmV Ribonuclease M5
2510 CP129978.1 GCA_030503795.1_02510 CDS open 2453191-2454084 894_na     297_aa rsmA Ribosomal RNA small subunit methyltransferase A
2511 CP129978.1 GCA_030503795.1_02511 CDS open 2454271-2454525 255_na     84_aa veg Protein Veg
2512 CP129978.1 GCA_030503795.1_02512 CDS open 2454743-2455606 864_na     287_aa ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
2513 CP129978.1 GCA_030503795.1_02513 CDS open 2455714-2456547 834_na     277_aa purR Pur operon repressor
2514 CP129978.1 GCA_030503795.1_02514 CDS open 2456678-2456992 315_na     104_aa spoVG Putative septation protein SpoVG
2515 CP129978.1 GCA_030503795.1_02515 CDS open 2457163-2458539 1377_na     458_aa glmU Bifunctional protein GlmU
2516 CP129978.1 GCA_030503795.1_02516 CDS open 2458555-2459511 957_na     318_aa prs_2 Ribose-phosphate pyrophosphokinase
2517 CP129978.1 GCA_030503795.1_02517 CDS open 2459565-2460518 954_na     317_aa ldh_4 L-lactate dehydrogenase
2518 CP129978.1 GCA_030503795.1_02518 CDS open 2460742-2461359 618_na     205_aa rplY 50S ribosomal protein L25
2519 CP129978.1 GCA_030503795.1_02519 CDS open 2461447-2462334 888_na     295_aa fieF Ferrous-iron efflux pump FieF
2520 CP129978.1 GCA_030503795.1_02520 CDS open 2462704-2463270 567_na     188_aa pth Peptidyl-tRNA hydrolase
2521 CP129978.1 GCA_030503795.1_02521 CDS open 2463284-2466820 3537_na     1178_aa mfd Transcription-repair-coupling factor
2522 CP129978.1 GCA_030503795.1_02522 CDS open 2466840-2467631 792_na     263_aa hypothetical protein
2523 CP129978.1 GCA_030503795.1_02523 CDS open 2467591-2468418 828_na     275_aa murJ_2 lipid II flippase MurJ
2524 CP129978.1 GCA_030503795.1_02524 CDS open 2468428-2468685 258_na     85_aa hypothetical protein
2525 CP129978.1 GCA_030503795.1_02525 CDS open 2468856-2469230 375_na     124_aa divIC Cell division protein DivIC
2526 CP129978.1 GCA_030503795.1_02526 CDS open 2469286-2469723 438_na     145_aa yugI_2 General stress protein 13
2527 CP129978.1 GCA_030503795.1_02527 CDS open 2469819-2471207 1389_na     462_aa tilS tRNA(Ile)-lysidine synthase
2528 CP129978.1 GCA_030503795.1_02528 CDS open 2471222-2471761 540_na     179_aa hpt Hypoxanthine-guanine phosphoribosyltransferase
2529 CP129978.1 GCA_030503795.1_02529 CDS open 2471999-2474029 2031_na     676_aa ftsH ATP-dependent zinc metalloprotease FtsH
2530 CP129978.1 GCA_030503795.1_02530 CDS open 2474091-2474975 885_na     294_aa hslO 33 kDa chaperonin
2531 CP129978.1 GCA_030503795.1_02531 CDS open 2475048-2475980 933_na     310_aa cysK Cysteine synthase
2532 CP129978.1 GCA_030503795.1_02532 CDS open 2476151-2476966 816_na     271_aa folP Dihydropteroate synthase
2533 CP129978.1 GCA_030503795.1_02533 CDS open 2476959-2477330 372_na     123_aa folB Dihydroneopterin aldolase
2534 CP129978.1 GCA_030503795.1_02534 CDS open 2477327-2477800 474_na     157_aa folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2535 CP129978.1 GCA_030503795.1_02535 CDS open 2477999-2479492 1494_na     497_aa lysS Lysine--tRNA ligase
2536 CP129978.1 rRNA open 2480044-2481588 16S ribosomal RNA
2537 CP129978.1 tRNA open 2481692-2481768 tRNA-Ile(gat)
2538 CP129978.1 tRNA open 2481790-2481865 tRNA-Ala(tgc)
2539 CP129978.1 rRNA open 2482155-2485080 23S ribosomal RNA
2540 CP129978.1 rRNA open 2485329-2485439 5S ribosomal RNA
2541 CP129978.1 tRNA open 2485446-2485521 tRNA-Val(tac)
2542 CP129978.1 tRNA open 2485527-2485601 tRNA-Thr(tgt)
2543 CP129978.1 tRNA open 2485658-2485730 tRNA-Lys(ttt)
2544 CP129978.1 tRNA open 2485737-2485818 tRNA-Leu(tag)
2545 CP129978.1 tRNA open 2485823-2485897 tRNA-Gly(gcc)
2546 CP129978.1 tRNA open 2485927-2486015 tRNA-Leu(taa)
2547 CP129978.1 tRNA open 2486022-2486095 tRNA-Arg(acg)
2548 CP129978.1 tRNA open 2486105-2486178 tRNA-Pro(tgg)
2549 CP129978.1 GCA_030503795.1_02549 CDS open 2486455-2486913 459_na     152_aa ctsr Transcriptional regulator CtsR
2550 CP129978.1 GCA_030503795.1_02550 CDS open 2486947-2489445 2499_na     832_aa clpC Negative regulator of genetic competence ClpCMecB
2551 CP129978.1 GCA_030503795.1_02551 CDS open 2489652-2491037 1386_na     461_aa radA DNA repair protein RadA
2552 CP129978.1 GCA_030503795.1_02552 CDS open 2491053-2492135 1083_na     360_aa yacL putative PIN and TRAM-domain containing protein YacL
2553 CP129978.1 GCA_030503795.1_02553 CDS open 2492149-2492847 699_na     232_aa ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
2554 CP129978.1 GCA_030503795.1_02554 CDS open 2492850-2493326 477_na     158_aa ispF 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase
2555 CP129978.1 GCA_030503795.1_02555 CDS open 2493362-2494576 1215_na     404_aa gltX_1 Glutamate--tRNA ligase
2556 CP129978.1 GCA_030503795.1_02556 CDS open 2494570-2494830 261_na     86_aa gltX_2 Glutamate--tRNA ligase
2557 CP129978.1 misc_RNA open 2494884-2495093 T-box
2558 CP129978.1 GCA_030503795.1_02558 CDS open 2495147-2495785 639_na     212_aa cysE Serine acetyltransferase
2559 CP129978.1 GCA_030503795.1_02559 CDS open 2495785-2497203 1419_na     472_aa cysS Cysteine--tRNA ligase
2560 CP129978.1 GCA_030503795.1_02560 CDS open 2497206-2497613 408_na     135_aa mrnC Mini-ribonuclease 3
2561 CP129978.1 GCA_030503795.1_02561 CDS open 2497615-2498358 744_na     247_aa Putative TrmH family tRNArRNA methyltransferase
2562 CP129978.1 GCA_030503795.1_02562 CDS open 2498360-2498881 522_na     173_aa yacP putative protein YacP
2563 CP129978.1 GCA_030503795.1_02563 CDS open 2498948-2499559 612_na     203_aa sigH RNA polymerase sigma-H factor
2564 CP129978.1 GCA_030503795.1_02564 CDS open 2499826-2500011 186_na     61_aa secE Protein translocase subunit SecE
2565 CP129978.1 GCA_030503795.1_02565 CDS open 2500154-2500687 534_na     177_aa nusG Transcription terminationantitermination protein NusG
2566 CP129978.1 GCA_030503795.1_02566 CDS open 2501469-2501894 426_na     141_aa rplK 50S ribosomal protein L11
2567 CP129978.1 GCA_030503795.1_02567 CDS open 2502010-2502702 693_na     230_aa rplA 50S ribosomal protein L1
2568 CP129978.1 misc_RNA open 2502749-2502883 L10_leader
2569 CP129978.1 GCA_030503795.1_02569 CDS open 2502920-2503423 504_na     167_aa rplJ 50S ribosomal protein L10
2570 CP129978.1 GCA_030503795.1_02570 CDS open 2503454-2503816 363_na     120_aa rplL 50S ribosomal protein L7L12
2571 CP129978.1 GCA_030503795.1_02571 CDS open 2504030-2504632 603_na     200_aa rsmC Ribosomal RNA small subunit methyltransferase C
2572 CP129978.1 GCA_030503795.1_02572 CDS open 2504825-2508385 3561_na     1186_aa rpoB DNA-directed RNA polymerase subunit beta
2573 CP129978.1 GCA_030503795.1_02573 CDS open 2508496-2512101 3606_na     1201_aa rpoC DNA-directed RNA polymerase subunit beta
2574 CP129978.1 GCA_030503795.1_02574 CDS open 2512376-2512789 414_na     137_aa rpsL 30S ribosomal protein S12
2575 CP129978.1 GCA_030503795.1_02575 CDS open 2512816-2513286 471_na     156_aa rpsG 30S ribosomal protein S7
2576 CP129978.1 GCA_030503795.1_02576 CDS open 2513364-2515439 2076_na     691_aa fusA Elongation factor G
2577 CP129978.1 GCA_030503795.1_02577 CDS open 2515548-2516732 1185_na     394_aa tuf Elongation factor Tu
2578 CP129978.1 GCA_030503795.1_02578 CDS open 2516867-2517271 405_na     134_aa hypothetical protein
2579 CP129978.1 GCA_030503795.1_02579 CDS open 2517271-2517687 417_na     138_aa hypothetical protein
2580 CP129978.1 GCA_030503795.1_02580 CDS open 2517765-2517953 189_na     62_aa hypothetical protein
2581 CP129978.1 GCA_030503795.1_02581 CDS open 2517913-2518221 309_na     102_aa rpsJ 30S ribosomal protein S10
2582 CP129978.1 GCA_030503795.1_02582 CDS open 2518251-2518877 627_na     208_aa rplC 50S ribosomal protein L3
2583 CP129978.1 GCA_030503795.1_02583 CDS open 2518906-2519529 624_na     207_aa rplD 50S ribosomal protein L4
2584 CP129978.1 GCA_030503795.1_02584 CDS open 2519529-2519813 285_na     94_aa rplW 50S ribosomal protein L23
2585 CP129978.1 GCA_030503795.1_02585 CDS open 2519837-2520670 834_na     277_aa rplB 50S ribosomal protein L2
2586 CP129978.1 GCA_030503795.1_02586 CDS open 2520726-2521001 276_na     91_aa rpsS 30S ribosomal protein S19
2587 CP129978.1 GCA_030503795.1_02587 CDS open 2521023-2521367 345_na     114_aa rplV 50S ribosomal protein L22
2588 CP129978.1 GCA_030503795.1_02588 CDS open 2521381-2522043 663_na     220_aa rpsC 30S ribosomal protein S3
2589 CP129978.1 GCA_030503795.1_02589 CDS open 2522046-2522480 435_na     144_aa rplP 50S ribosomal protein L16
2590 CP129978.1 GCA_030503795.1_02590 CDS open 2522470-2522661 192_na     63_aa rpmC 50S ribosomal protein L29
2591 CP129978.1 GCA_030503795.1_02591 CDS open 2522714-2522977 264_na     87_aa rpsQ 30S ribosomal protein S17
2592 CP129978.1 GCA_030503795.1_02592 CDS open 2523038-2523406 369_na     122_aa rplN 50S ribosomal protein L14
2593 CP129978.1 GCA_030503795.1_02593 CDS open 2523414-2523761 348_na     115_aa rplX 50S ribosomal protein L24
2594 CP129978.1 GCA_030503795.1_02594 CDS open 2523791-2524330 540_na     179_aa rplE 50S ribosomal protein L5
2595 CP129978.1 GCA_030503795.1_02595 CDS open 2524371-2524556 186_na     61_aa rpsN1 30S ribosomal protein S14
2596 CP129978.1 GCA_030503795.1_02596 CDS open 2524588-2524986 399_na     132_aa rpsH 30S ribosomal protein S8
2597 CP129978.1 GCA_030503795.1_02597 CDS open 2525014-2525553 540_na     179_aa rplF 50S ribosomal protein L6
2598 CP129978.1 GCA_030503795.1_02598 CDS open 2525603-2525962 360_na     119_aa rplR 50S ribosomal protein L18
2599 CP129978.1 GCA_030503795.1_02599 CDS open 2525983-2526486 504_na     167_aa rpsE 30S ribosomal protein S5
2600 CP129978.1 GCA_030503795.1_02600 CDS open 2526501-2526683 183_na     60_aa rpmD 50S ribosomal protein L30
2601 CP129978.1 GCA_030503795.1_02601 CDS open 2526750-2527190 441_na     146_aa rplO 50S ribosomal protein L15
2602 CP129978.1 GCA_030503795.1_02602 CDS open 2527190-2528485 1296_na     431_aa secY Protein translocase subunit SecY
2603 CP129978.1 GCA_030503795.1_02603 CDS open 2528622-2529266 645_na     214_aa adk Adenylate kinase
2604 CP129978.1 GCA_030503795.1_02604 CDS open 2529491-2529709 219_na     72_aa infA Translation initiation factor IF-1
2605 CP129978.1 GCA_030503795.1_02605 CDS open 2529880-2530245 366_na     121_aa rpsM 30S ribosomal protein S13
2606 CP129978.1 GCA_030503795.1_02606 CDS open 2530272-2530661 390_na     129_aa rpsK 30S ribosomal protein S11
2607 CP129978.1 GCA_030503795.1_02607 CDS open 2530739-2531683 945_na     314_aa rpoA DNA-directed RNA polymerase subunit alpha
2608 CP129978.1 GCA_030503795.1_02608 CDS open 2531704-2532114 411_na     136_aa rplQ 50S ribosomal protein L17
2609 CP129978.1 GCA_030503795.1_02609 CDS open 2532455-2533300 846_na     281_aa ecfA1 Energy-coupling factor transporter ATP-binding protein EcfA1
2610 CP129978.1 GCA_030503795.1_02610 CDS open 2533276-2534937 1662_na     553_aa ecfT_2 Energy-coupling factor transporter transmembrane protein EcfT
2611 CP129978.1 GCA_030503795.1_02611 CDS open 2534941-2535576 636_na     211_aa truA_2 tRNA pseudouridine synthase A
2612 CP129978.1 misc_RNA open 2535746-2535820 L13_leader
2613 CP129978.1 GCA_030503795.1_02613 CDS open 2535855-2536292 438_na     145_aa rplM 50S ribosomal protein L13
2614 CP129978.1 GCA_030503795.1_02614 CDS open 2536311-2536703 393_na     130_aa rpsI 30S ribosomal protein S9
2615 CP129978.1 GCA_030503795.1_02615 CDS open 2536819-2536956 138_na     45_aa hypothetical protein
2616 CP129978.1 GCA_030503795.1_02616 CDS open 2537299-2537622 324_na     107_aa hypothetical protein
2617 CP129978.1 GCA_030503795.1_02617 CDS open 2537660-2538154 495_na     164_aa hypothetical protein
2618 CP129978.1 GCA_030503795.1_02618 CDS open 2538324-2540564 2241_na     746_aa rhaR HTH-type transcriptional activator RhaR
2619 CP129978.1 GCA_030503795.1_02619 CDS open 2540706-2543447 2742_na     913_aa hypothetical protein
2620 CP129978.1 GCA_030503795.1_02620 CDS open 2543475-2545028 1554_na     517_aa bglB_2 Thermostable beta-glucosidase B
2621 CP129978.1 GCA_030503795.1_02621 CDS open 2545072-2545830 759_na     252_aa hypothetical protein
2622 CP129978.1 GCA_030503795.1_02622 CDS open 2546309-2546926 618_na     205_aa putative metallo-hydrolase
2623 CP129978.1 GCA_030503795.1_02623 CDS open 2547124-2548017 894_na     297_aa murQ N-acetylmuramic acid 6-phosphate etherase
2624 CP129978.1 GCA_030503795.1_02624 CDS open 2548030-2549478 1449_na     482_aa PTS system EIIBC component
2625 CP129978.1 GCA_030503795.1_02625 CDS open 2549755-2550801 1047_na     348_aa hypothetical protein
2626 CP129978.1 GCA_030503795.1_02626 CDS open 2550841-2551686 846_na     281_aa ybbH_3 putative HTH-type transcriptional regulator YbbH
2627 CP129978.1 GCA_030503795.1_02627 CDS open 2551700-2551912 213_na     70_aa hypothetical protein
2628 CP129978.1 GCA_030503795.1_02628 CDS open 2551951-2552697 747_na     248_aa ecfT_3 Energy-coupling factor transporter transmembrane protein EcfT
2629 CP129978.1 GCA_030503795.1_02629 CDS open 2552700-2554094 1395_na     464_aa ykoD_3 Putative HMPthiamine import ATP-binding protein YkoD
2630 CP129978.1 GCA_030503795.1_02630 CDS open 2554081-2554656 576_na     191_aa ykoE Putative HMPthiamine permease protein YkoE
2631 CP129978.1 misc_RNA open 2554769-2554874 TPP
2632 CP129978.1 GCA_030503795.1_02632 CDS open 2555011-2555556 546_na     181_aa bioY Biotin transporter BioY
2633 CP129978.1 GCA_030503795.1_02633 CDS open 2555727-2557541 1815_na     604_aa mrdA Peptidoglycan D%2CD-transpeptidase MrdA